EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAPG00000003919 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Minus strand
Length
19968 bases
Position
chrAVPZ01000445.1:5449839-5469806
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000001873RRM_1PF00076.222.8e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000004411MSI1-2011056-ENSCAPP00000001873351 (aa)--
Gene Model
Click here to download ENSCAPG00000003919's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000003919's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000003919MSI18989.776ENSG00000135097MSI19489.776Homo_sapiens
ENSCAPG00000003919MSI17886.081ENSAPOG00000003191MSI19486.081Acanthochromis_polyacanthus
ENSCAPG00000003919MSI17885.348ENSAPOG00000023458-9476.997Acanthochromis_polyacanthus
ENSCAPG00000003919MSI17878.154ENSAMEG00000013302MSI110078.154Ailuropoda_melanoleuca
ENSCAPG00000003919MSI17481.923ENSACIG00000017754-7881.923Amphilophus_citrinellus
ENSCAPG00000003919MSI17874.725ENSAOCG00000009031-9575.092Amphiprion_ocellaris
ENSCAPG00000003919MSI17886.081ENSAOCG00000003804MSI19486.081Amphiprion_ocellaris
ENSCAPG00000003919MSI17885.348ENSAPEG00000006857-8177.926Amphiprion_percula
ENSCAPG00000003919MSI17886.081ENSAPEG00000003245MSI19486.081Amphiprion_percula
ENSCAPG00000003919MSI17882.482ENSATEG00000023779-9382.482Anabas_testudineus
ENSCAPG00000003919MSI17884.982ENSATEG00000017059MSI19082.969Anabas_testudineus
ENSCAPG00000003919MSI18987.220ENSACAG00000002762MSI110087.220Anolis_carolinensis
ENSCAPG00000003919MSI18989.776ENSANAG00000027151MSI192100.000Aotus_nancymaae
ENSCAPG00000003919MSI16096.651ENSANAG00000027901-9296.651Aotus_nancymaae
ENSCAPG00000003919MSI17885.348ENSACLG00000011230MSI19485.348Astatotilapia_calliptera
ENSCAPG00000003919MSI17884.615ENSACLG00000000117-10076.358Astatotilapia_calliptera
ENSCAPG00000003919MSI17883.883ENSAMXG00000038960msi17683.883Astyanax_mexicanus
ENSCAPG00000003919MSI18989.776ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSCAPG00000003919MSI18989.776ENSCJAG00000008578MSI19489.776Callithrix_jacchus
ENSCAPG00000003919MSI17899.634ENSCAFG00000010283MSI19499.634Canis_familiaris
ENSCAPG00000003919MSI18989.776ENSCAFG00020020585MSI19689.776Canis_lupus_dingo
ENSCAPG00000003919MSI18983.750ENSCHIG00000024304MSI19583.750Capra_hircus
ENSCAPG00000003919MSI18989.776ENSTSYG00000033949MSI19589.776Carlito_syrichta
ENSCAPG00000003919MSI18989.776ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSCAPG00000003919MSI18989.776ENSCCAG00000035567MSI19489.776Cebus_capucinus
ENSCAPG00000003919MSI18989.776ENSCATG00000030019MSI19493.407Cercocebus_atys
ENSCAPG00000003919MSI178100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSCAPG00000003919MSI15294.681ENSCSAG00000002265MSI18994.681Chlorocebus_sabaeus
ENSCAPG00000003919MSI18985.942ENSCPBG00000011349MSI19495.604Chrysemys_picta_bellii
ENSCAPG00000003919MSI18989.776ENSCANG00000040651MSI19989.776Colobus_angolensis_palliatus
ENSCAPG00000003919MSI18989.776ENSCGRG00001018883Msi19592.473Cricetulus_griseus_chok1gshd
ENSCAPG00000003919MSI178100.000ENSCGRG00000002191Msi172100.000Cricetulus_griseus_crigri
ENSCAPG00000003919MSI17885.714ENSCSEG00000005834-9485.714Cynoglossus_semilaevis
ENSCAPG00000003919MSI17875.824ENSCSEG00000011032MSI110068.690Cynoglossus_semilaevis
ENSCAPG00000003919MSI18975.399ENSCSEG00000008352-9475.399Cynoglossus_semilaevis
ENSCAPG00000003919MSI18976.997ENSCVAG00000009100MSI19476.997Cyprinodon_variegatus
ENSCAPG00000003919MSI16668.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSCAPG00000003919MSI16582.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSCAPG00000003919MSI18973.163ENSDARG00000010710msi110085.022Danio_rerio
ENSCAPG00000003919MSI17887.912ENSDNOG00000005713MSI19187.912Dasypus_novemcinctus
ENSCAPG00000003919MSI18989.776ENSDORG00000005610Msi19389.776Dipodomys_ordii
ENSCAPG00000003919MSI17894.872ENSETEG00000004756MSI19985.304Echinops_telfairi
ENSCAPG00000003919MSI18989.776ENSEASG00005004736MSI19493.040Equus_asinus_asinus
ENSCAPG00000003919MSI18989.776ENSECAG00000017526MSI19489.776Equus_caballus
ENSCAPG00000003919MSI17879.487ENSELUG00000023280-10079.121Esox_lucius
ENSCAPG00000003919MSI18972.372ENSELUG00000023219MSI19272.372Esox_lucius
ENSCAPG00000003919MSI18989.776ENSFCAG00000011007MSI19489.776Felis_catus
ENSCAPG00000003919MSI18985.623ENSFALG00000007574MSI19685.623Ficedula_albicollis
ENSCAPG00000003919MSI18989.457ENSFDAG00000019586MSI19989.457Fukomys_damarensis
ENSCAPG00000003919MSI17885.348ENSFHEG00000003560-9485.348Fundulus_heteroclitus
ENSCAPG00000003919MSI18977.316ENSFHEG00000022446MSI19477.316Fundulus_heteroclitus
ENSCAPG00000003919MSI17884.615ENSGMOG00000017838-7584.615Gadus_morhua
ENSCAPG00000003919MSI17882.418ENSGMOG00000001006MSI19474.121Gadus_morhua
ENSCAPG00000003919MSI17894.909ENSGALG00000007227MSI19086.598Gallus_gallus
ENSCAPG00000003919MSI17884.615ENSGAFG00000021522MSI19484.615Gambusia_affinis
ENSCAPG00000003919MSI18960.064ENSGAFG00000005860-8960.064Gambusia_affinis
ENSCAPG00000003919MSI17885.401ENSGACG00000008674-9485.401Gasterosteus_aculeatus
ENSCAPG00000003919MSI17883.883ENSGACG00000012679MSI19483.883Gasterosteus_aculeatus
ENSCAPG00000003919MSI17895.604ENSGAGG00000016037MSI19495.604Gopherus_agassizii
ENSCAPG00000003919MSI18989.776ENSGGOG00000010328MSI19589.776Gorilla_gorilla
ENSCAPG00000003919MSI17885.348ENSHBUG00000021921MSI19485.348Haplochromis_burtoni
ENSCAPG00000003919MSI17884.615ENSHBUG00000011841-9476.358Haplochromis_burtoni
ENSCAPG00000003919MSI18989.457ENSHGLG00000012782MSI19489.457Heterocephalus_glaber_female
ENSCAPG00000003919MSI18989.457ENSHGLG00100016848MSI19989.457Heterocephalus_glaber_male
ENSCAPG00000003919MSI17879.853ENSHCOG00000012019MSI110079.853Hippocampus_comes
ENSCAPG00000003919MSI18975.399ENSHCOG00000012067-7795.161Hippocampus_comes
ENSCAPG00000003919MSI17883.150ENSIPUG00000001976msi19583.150Ictalurus_punctatus
ENSCAPG00000003919MSI18989.776ENSSTOG00000009799MSI19689.776Ictidomys_tridecemlineatus
ENSCAPG00000003919MSI18989.776ENSJJAG00000010463Msi19489.776Jaculus_jaculus
ENSCAPG00000003919MSI17880.586ENSJJAG00000010643-9480.220Jaculus_jaculus
ENSCAPG00000003919MSI17882.051ENSKMAG00000019877-10082.051Kryptolebias_marmoratus
ENSCAPG00000003919MSI17884.249ENSKMAG00000011251MSI19476.038Kryptolebias_marmoratus
ENSCAPG00000003919MSI18976.358ENSLBEG00000008789MSI19480.220Labrus_bergylta
ENSCAPG00000003919MSI17885.348ENSLBEG00000001375-9485.348Labrus_bergylta
ENSCAPG00000003919MSI17887.636ENSLACG00000018287MSI110087.636Latimeria_chalumnae
ENSCAPG00000003919MSI17887.273ENSLAFG00000009412MSI110087.273Loxodonta_africana
ENSCAPG00000003919MSI178100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSCAPG00000003919MSI18989.776ENSMMUG00000031527MSI19689.776Macaca_mulatta
ENSCAPG00000003919MSI18989.776ENSMNEG00000040034MSI19493.040Macaca_nemestrina
ENSCAPG00000003919MSI18989.776ENSMLEG00000003921MSI19989.776Mandrillus_leucophaeus
ENSCAPG00000003919MSI17885.714ENSMAMG00000018426-9485.714Mastacembelus_armatus
ENSCAPG00000003919MSI17883.883ENSMAMG00000002279MSI19475.719Mastacembelus_armatus
ENSCAPG00000003919MSI17884.615ENSMZEG00005000340-9480.220Maylandia_zebra
ENSCAPG00000003919MSI17885.348ENSMZEG00005026892MSI19485.348Maylandia_zebra
ENSCAPG00000003919MSI150100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSCAPG00000003919MSI18989.776ENSMICG00000033181MSI19493.407Microcebus_murinus
ENSCAPG00000003919MSI18989.457ENSMOCG00000002286Msi19489.457Microtus_ochrogaster
ENSCAPG00000003919MSI17882.051ENSMMOG00000012265-9682.051Mola_mola
ENSCAPG00000003919MSI18966.773ENSMMOG00000010492MSI19666.773Mola_mola
ENSCAPG00000003919MSI18956.646ENSMODG00000003189-10056.646Monodelphis_domestica
ENSCAPG00000003919MSI17884.615ENSMALG00000017889MSI19580.586Monopterus_albus
ENSCAPG00000003919MSI17884.982ENSMALG00000001426-10084.982Monopterus_albus
ENSCAPG00000003919MSI17899.267MGP_CAROLIEiJ_G0027626Msi19499.267Mus_caroli
ENSCAPG00000003919MSI17899.267ENSMUSG00000054256Msi19995.238Mus_musculus
ENSCAPG00000003919MSI17898.901MGP_PahariEiJ_G0024206Msi19498.901Mus_pahari
ENSCAPG00000003919MSI17899.267MGP_SPRETEiJ_G0028624Msi19499.267Mus_spretus
ENSCAPG00000003919MSI18989.776ENSMPUG00000003168MSI19689.776Mustela_putorius_furo
ENSCAPG00000003919MSI18980.312ENSMLUG00000010313MSI110080.312Myotis_lucifugus
ENSCAPG00000003919MSI178100.000ENSNGAG00000014508Msi191100.000Nannospalax_galili
ENSCAPG00000003919MSI17377.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSCAPG00000003919MSI17884.615ENSNBRG00000000841-9480.220Neolamprologus_brichardi
ENSCAPG00000003919MSI18978.914ENSNLEG00000015636MSI19078.914Nomascus_leucogenys
ENSCAPG00000003919MSI17883.883ENSMEUG00000015759MSI18383.883Notamacropus_eugenii
ENSCAPG00000003919MSI18581.667ENSOPRG00000016879MSI19981.667Ochotona_princeps
ENSCAPG00000003919MSI18989.776ENSODEG00000006328MSI19989.776Octodon_degus
ENSCAPG00000003919MSI17885.714ENSONIG00000019452-9485.714Oreochromis_niloticus
ENSCAPG00000003919MSI17884.615ENSONIG00000011182MSI19476.358Oreochromis_niloticus
ENSCAPG00000003919MSI178100.000ENSOCUG00000027716MSI188100.000Oryctolagus_cuniculus
ENSCAPG00000003919MSI17885.348ENSORLG00000029593MSI19485.348Oryzias_latipes
ENSCAPG00000003919MSI18976.997ENSORLG00000019978-9476.997Oryzias_latipes
ENSCAPG00000003919MSI17885.348ENSORLG00020008266MSI19485.348Oryzias_latipes_hni
ENSCAPG00000003919MSI18976.997ENSORLG00020001208-6776.997Oryzias_latipes_hni
ENSCAPG00000003919MSI18976.997ENSORLG00015013672-7173.163Oryzias_latipes_hsok
ENSCAPG00000003919MSI17885.348ENSORLG00015003916MSI19485.348Oryzias_latipes_hsok
ENSCAPG00000003919MSI18976.997ENSOMEG00000017536MSI110073.802Oryzias_melastigma
ENSCAPG00000003919MSI17886.081ENSOMEG00000002272-9786.081Oryzias_melastigma
ENSCAPG00000003919MSI17898.913ENSOGAG00000003847MSI19898.913Otolemur_garnettii
ENSCAPG00000003919MSI17895.255ENSOARG00000012097MSI110095.255Ovis_aries
ENSCAPG00000003919MSI18989.776ENSPPAG00000043073MSI19989.776Pan_paniscus
ENSCAPG00000003919MSI18989.776ENSPPRG00000000370MSI19489.776Panthera_pardus
ENSCAPG00000003919MSI18989.776ENSPTIG00000008913MSI19689.776Panthera_tigris_altaica
ENSCAPG00000003919MSI18989.776ENSPTRG00000005531MSI19493.040Pan_troglodytes
ENSCAPG00000003919MSI19386.850ENSPANG00000006335MSI19486.850Papio_anubis
ENSCAPG00000003919MSI17886.081ENSPKIG00000016497MSI19486.081Paramormyrops_kingsleyae
ENSCAPG00000003919MSI17885.348ENSPKIG00000023575-9485.348Paramormyrops_kingsleyae
ENSCAPG00000003919MSI17890.476ENSPSIG00000011608-9390.476Pelodiscus_sinensis
ENSCAPG00000003919MSI16592.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSCAPG00000003919MSI17866.909ENSPMGG00000007743-9867.391Periophthalmus_magnuspinnatus
ENSCAPG00000003919MSI18572.000ENSPMGG00000000514MSI19772.000Periophthalmus_magnuspinnatus
ENSCAPG00000003919MSI18989.457ENSPEMG00000010491Msi19389.457Peromyscus_maniculatus_bairdii
ENSCAPG00000003919MSI18976.997ENSPFOG00000013113MSI19476.997Poecilia_formosa
ENSCAPG00000003919MSI17885.348ENSPFOG00000008319-8185.348Poecilia_formosa
ENSCAPG00000003919MSI18976.997ENSPLAG00000014025-9476.997Poecilia_latipinna
ENSCAPG00000003919MSI17885.348ENSPLAG00000012431-9185.348Poecilia_latipinna
ENSCAPG00000003919MSI17884.615ENSPMEG00000007025-9375.458Poecilia_mexicana
ENSCAPG00000003919MSI18976.997ENSPMEG00000012796MSI19476.997Poecilia_mexicana
ENSCAPG00000003919MSI17881.685ENSPREG00000021416-9481.685Poecilia_reticulata
ENSCAPG00000003919MSI16478.571ENSPREG00000014574-10078.571Poecilia_reticulata
ENSCAPG00000003919MSI18989.776ENSPPYG00000005027MSI19489.776Pongo_abelii
ENSCAPG00000003919MSI156100.000ENSPCAG00000002300MSI172100.000Procavia_capensis
ENSCAPG00000003919MSI18989.776ENSPCOG00000017341MSI19493.407Propithecus_coquereli
ENSCAPG00000003919MSI17879.487ENSPVAG00000002225MSI19979.487Pteropus_vampyrus
ENSCAPG00000003919MSI17884.615ENSPNYG00000002529-9476.358Pundamilia_nyererei
ENSCAPG00000003919MSI17885.348ENSPNYG00000004379MSI19485.348Pundamilia_nyererei
ENSCAPG00000003919MSI17883.516ENSPNAG00000019337msi19483.516Pygocentrus_nattereri
ENSCAPG00000003919MSI18989.457ENSRNOG00000001156Msi19689.457Rattus_norvegicus
ENSCAPG00000003919MSI18989.776ENSRBIG00000036889MSI19689.776Rhinopithecus_bieti
ENSCAPG00000003919MSI178100.000ENSRROG00000041076MSI193100.000Rhinopithecus_roxellana
ENSCAPG00000003919MSI178100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSCAPG00000003919MSI18978.481ENSSHAG00000006834MSI19978.481Sarcophilus_harrisii
ENSCAPG00000003919MSI17886.447ENSSFOG00015014964-9586.447Scleropages_formosus
ENSCAPG00000003919MSI17887.912ENSSFOG00015005350MSI19687.912Scleropages_formosus
ENSCAPG00000003919MSI18973.482ENSSMAG00000018824MSI19773.482Scophthalmus_maximus
ENSCAPG00000003919MSI17886.131ENSSMAG00000009156-7086.131Scophthalmus_maximus
ENSCAPG00000003919MSI17884.982ENSSDUG00000001027MSI19476.677Seriola_dumerili
ENSCAPG00000003919MSI17885.714ENSSDUG00000022697-9485.714Seriola_dumerili
ENSCAPG00000003919MSI17884.982ENSSLDG00000016832MSI19480.586Seriola_lalandi_dorsalis
ENSCAPG00000003919MSI17881.319ENSSLDG00000018706-9682.847Seriola_lalandi_dorsalis
ENSCAPG00000003919MSI18985.623ENSSPUG00000015741MSI110085.623Sphenodon_punctatus
ENSCAPG00000003919MSI17886.447ENSSPAG00000013098-10086.447Stegastes_partitus
ENSCAPG00000003919MSI16468.750ENSSPAG00000014085-10068.750Stegastes_partitus
ENSCAPG00000003919MSI18989.457ENSSSCG00000029365MSI19492.674Sus_scrofa
ENSCAPG00000003919MSI17896.337ENSTGUG00000009534MSI110096.337Taeniopygia_guttata
ENSCAPG00000003919MSI17869.818ENSTRUG00000015636-7974.359Takifugu_rubripes
ENSCAPG00000003919MSI16581.659ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSCAPG00000003919MSI17878.261ENSTNIG00000011469MSI19470.886Tetraodon_nigroviridis
ENSCAPG00000003919MSI17863.194ENSTNIG00000019814-9563.194Tetraodon_nigroviridis
ENSCAPG00000003919MSI17889.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSCAPG00000003919MSI17876.923ENSTTRG00000005663MSI110076.923Tursiops_truncatus
ENSCAPG00000003919MSI15191.160ENSUAMG00000015514MSI17791.160Ursus_americanus
ENSCAPG00000003919MSI19779.941ENSUMAG00000006176MSI19179.941Ursus_maritimus
ENSCAPG00000003919MSI18989.776ENSVVUG00000020993MSI110089.776Vulpes_vulpes
ENSCAPG00000003919MSI17891.241ENSXETG00000012216msi19591.304Xenopus_tropicalis
ENSCAPG00000003919MSI17278.355ENSXCOG00000017605MSI18078.355Xiphophorus_couchianus
ENSCAPG00000003919MSI18976.997ENSXMAG00000027103MSI18970.927Xiphophorus_maculatus
ENSCAPG00000003919MSI17884.982ENSXMAG00000018237-9484.982Xiphophorus_maculatus

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