EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000004004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1681 bases
Position: chrAVPZ01000311.1:21155085-21156765
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000001879	MIF4G	PF02854.19	1.3e-23	1	2
ENSCAPP00000001879	MIF4G	PF02854.19	1.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000004434	-	918	-	ENSCAPP00000001879	305 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000004004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000004004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000004004	-	78	70.000	ENSCAPG00000011453	-	79	71.371
ENSCAPG00000004004	-	96	79.758	ENSCAPG00000009069	-	83	79.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000004004	-	99	82.405	ENSG00000172239	PAIP1	100	84.211	Homo_sapiens
ENSCAPG00000004004	-	93	53.776	ENSAPOG00000006399	paip1	87	53.776	Acanthochromis_polyacanthus
ENSCAPG00000004004	-	99	81.633	ENSAMEG00000003938	PAIP1	84	81.633	Ailuropoda_melanoleuca
ENSCAPG00000004004	-	86	54.730	ENSACIG00000020292	paip1	80	54.730	Amphilophus_citrinellus
ENSCAPG00000004004	-	86	56.667	ENSAOCG00000006621	paip1	67	56.667	Amphiprion_ocellaris
ENSCAPG00000004004	-	86	56.711	ENSAPEG00000015887	paip1	80	56.711	Amphiprion_percula
ENSCAPG00000004004	-	97	51.057	ENSATEG00000021896	paip1	95	51.212	Anabas_testudineus
ENSCAPG00000004004	-	86	71.717	ENSAPLG00000001947	PAIP1	84	71.290	Anas_platyrhynchos
ENSCAPG00000004004	-	90	69.010	ENSACAG00000010867	PAIP1	77	65.015	Anolis_carolinensis
ENSCAPG00000004004	-	97	78.947	ENSANAG00000036342	-	94	78.704	Aotus_nancymaae
ENSCAPG00000004004	-	99	72.941	ENSANAG00000010174	-	84	73.795	Aotus_nancymaae
ENSCAPG00000004004	-	97	83.533	ENSANAG00000021765	-	96	82.301	Aotus_nancymaae
ENSCAPG00000004004	-	96	50.152	ENSACLG00000009431	paip1	84	47.401	Astatotilapia_calliptera
ENSCAPG00000004004	-	88	55.921	ENSAMXG00000013007	paip1	67	55.921	Astyanax_mexicanus
ENSCAPG00000004004	-	99	80.645	ENSBTAG00000020376	PAIP1	85	80.645	Bos_taurus
ENSCAPG00000004004	-	97	83.533	ENSCJAG00000001340	PAIP1	96	82.301	Callithrix_jacchus
ENSCAPG00000004004	-	99	81.232	ENSCAFG00020022519	PAIP1	87	82.875	Canis_lupus_dingo
ENSCAPG00000004004	-	99	80.938	ENSCHIG00000011111	PAIP1	85	80.938	Capra_hircus
ENSCAPG00000004004	-	96	84.894	ENSTSYG00000004304	PAIP1	96	84.802	Carlito_syrichta
ENSCAPG00000004004	-	96	74.018	ENSCPOG00000031032	-	82	74.018	Cavia_porcellus
ENSCAPG00000004004	-	96	85.196	ENSCPOG00000002525	-	84	84.691	Cavia_porcellus
ENSCAPG00000004004	-	99	96.053	ENSCPOG00000001035	-	75	96.053	Cavia_porcellus
ENSCAPG00000004004	-	96	77.564	ENSCCAG00000008870	-	94	77.377	Cebus_capucinus
ENSCAPG00000004004	-	97	83.234	ENSCCAG00000028929	-	96	82.006	Cebus_capucinus
ENSCAPG00000004004	-	98	81.121	ENSCATG00000041555	PAIP1	96	81.121	Cercocebus_atys
ENSCAPG00000004004	-	96	85.241	ENSCLAG00000009167	PAIP1	84	85.241	Chinchilla_lanigera
ENSCAPG00000004004	-	99	82.405	ENSCSAG00000016750	PAIP1	85	82.405	Chlorocebus_sabaeus
ENSCAPG00000004004	-	97	73.054	ENSCHOG00000004961	PAIP1	70	73.054	Choloepus_hoffmanni
ENSCAPG00000004004	-	94	73.089	ENSCPBG00000007653	PAIP1	64	73.089	Chrysemys_picta_bellii
ENSCAPG00000004004	-	98	82.006	ENSCANG00000034884	PAIP1	96	82.006	Colobus_angolensis_palliatus
ENSCAPG00000004004	-	97	82.583	ENSCGRG00001009535	Paip1	84	82.675	Cricetulus_griseus_chok1gshd
ENSCAPG00000004004	-	96	83.030	ENSCGRG00000008504	Paip1	85	83.030	Cricetulus_griseus_crigri
ENSCAPG00000004004	-	98	64.110	ENSCGRG00000006932	-	85	64.110	Cricetulus_griseus_crigri
ENSCAPG00000004004	-	93	52.997	ENSCSEG00000020061	paip1	72	52.997	Cynoglossus_semilaevis
ENSCAPG00000004004	-	86	54.915	ENSCSEG00000009725	paip1	86	50.284	Cynoglossus_semilaevis
ENSCAPG00000004004	-	91	49.367	ENSCVAG00000019990	paip1	72	50.633	Cyprinodon_variegatus
ENSCAPG00000004004	-	88	55.410	ENSDARG00000042892	paip1	81	52.059	Danio_rerio
ENSCAPG00000004004	-	97	82.036	ENSDNOG00000018687	PAIP1	70	82.036	Dasypus_novemcinctus
ENSCAPG00000004004	-	93	63.385	ENSDORG00000009739	Paip1	78	62.258	Dipodomys_ordii
ENSCAPG00000004004	-	99	81.232	ENSEASG00005013479	PAIP1	84	83.442	Equus_asinus_asinus
ENSCAPG00000004004	-	99	81.818	ENSECAG00000015245	PAIP1	84	83.766	Equus_caballus
ENSCAPG00000004004	-	89	66.559	ENSEEUG00000007196	-	84	66.559	Erinaceus_europaeus
ENSCAPG00000004004	-	59	79.812	ENSEEUG00000009651	-	78	79.812	Erinaceus_europaeus
ENSCAPG00000004004	-	86	57.667	ENSELUG00000003634	paip1	67	57.667	Esox_lucius
ENSCAPG00000004004	-	97	67.847	ENSFALG00000011181	PAIP1	83	67.847	Ficedula_albicollis
ENSCAPG00000004004	-	96	86.061	ENSFDAG00000006043	-	85	86.061	Fukomys_damarensis
ENSCAPG00000004004	-	97	71.772	ENSFDAG00000019263	-	84	71.772	Fukomys_damarensis
ENSCAPG00000004004	-	96	46.875	ENSFHEG00000006388	paip1	79	46.875	Fundulus_heteroclitus
ENSCAPG00000004004	-	92	52.050	ENSGMOG00000007366	paip1	72	52.050	Gadus_morhua
ENSCAPG00000004004	-	88	70.607	ENSGALG00000014867	PAIP1	84	70.607	Gallus_gallus
ENSCAPG00000004004	-	99	48.986	ENSGAFG00000017213	paip1	85	49.565	Gambusia_affinis
ENSCAPG00000004004	-	85	55.593	ENSGACG00000004529	paip1	65	55.593	Gasterosteus_aculeatus
ENSCAPG00000004004	-	98	82.301	ENSGGOG00000022753	-	96	82.301	Gorilla_gorilla
ENSCAPG00000004004	-	96	50.456	ENSHBUG00000012178	paip1	84	47.706	Haplochromis_burtoni
ENSCAPG00000004004	-	97	72.026	ENSHGLG00000009454	-	80	72.026	Heterocephalus_glaber_female
ENSCAPG00000004004	-	84	70.990	ENSHGLG00000016945	-	73	70.990	Heterocephalus_glaber_female
ENSCAPG00000004004	-	97	70.270	ENSHGLG00000010516	-	82	72.189	Heterocephalus_glaber_female
ENSCAPG00000004004	-	96	63.467	ENSHGLG00100006972	-	79	63.467	Heterocephalus_glaber_male
ENSCAPG00000004004	-	97	72.026	ENSHGLG00100004931	-	80	72.026	Heterocephalus_glaber_male
ENSCAPG00000004004	-	99	67.164	ENSHGLG00100004947	-	82	67.164	Heterocephalus_glaber_male
ENSCAPG00000004004	-	96	86.405	ENSHGLG00100008654	-	83	86.405	Heterocephalus_glaber_male
ENSCAPG00000004004	-	96	72.810	ENSHGLG00100012598	-	75	72.810	Heterocephalus_glaber_male
ENSCAPG00000004004	-	86	52.649	ENSHCOG00000006548	paip1	75	52.649	Hippocampus_comes
ENSCAPG00000004004	-	85	56.014	ENSIPUG00000023598	paip1	85	53.605	Ictalurus_punctatus
ENSCAPG00000004004	-	97	84.132	ENSSTOG00000011203	PAIP1	84	82.891	Ictidomys_tridecemlineatus
ENSCAPG00000004004	-	99	68.035	ENSJJAG00000012411	-	80	68.035	Jaculus_jaculus
ENSCAPG00000004004	-	94	63.758	ENSJJAG00000023587	-	82	63.758	Jaculus_jaculus
ENSCAPG00000004004	-	93	69.649	ENSJJAG00000022830	-	83	69.649	Jaculus_jaculus
ENSCAPG00000004004	-	88	78.896	ENSJJAG00000011812	-	84	78.896	Jaculus_jaculus
ENSCAPG00000004004	-	96	68.125	ENSJJAG00000022023	-	87	68.125	Jaculus_jaculus
ENSCAPG00000004004	-	90	51.863	ENSKMAG00000005128	paip1	72	51.863	Kryptolebias_marmoratus
ENSCAPG00000004004	-	86	55.667	ENSLBEG00000023703	paip1	67	55.667	Labrus_bergylta
ENSCAPG00000004004	-	95	59.021	ENSLOCG00000012270	paip1	71	59.021	Lepisosteus_oculatus
ENSCAPG00000004004	-	99	79.765	ENSLAFG00000012827	PAIP1	85	79.765	Loxodonta_africana
ENSCAPG00000004004	-	97	83.533	ENSMFAG00000043517	PAIP1	96	82.301	Macaca_fascicularis
ENSCAPG00000004004	-	98	82.301	ENSMMUG00000011878	PAIP1	96	82.301	Macaca_mulatta
ENSCAPG00000004004	-	99	82.388	ENSMNEG00000031868	PAIP1	96	80.060	Macaca_nemestrina
ENSCAPG00000004004	-	97	83.533	ENSMLEG00000030867	PAIP1	96	83.891	Mandrillus_leucophaeus
ENSCAPG00000004004	-	97	51.952	ENSMAMG00000012182	paip1	74	51.952	Mastacembelus_armatus
ENSCAPG00000004004	-	96	50.152	ENSMZEG00005012328	paip1	84	47.401	Maylandia_zebra
ENSCAPG00000004004	-	79	47.212	ENSMGAG00000003696	PAIP1	67	47.212	Meleagris_gallopavo
ENSCAPG00000004004	-	97	82.583	ENSMAUG00000014688	Paip1	84	82.675	Mesocricetus_auratus
ENSCAPG00000004004	-	99	77.353	ENSMICG00000032513	-	84	77.353	Microcebus_murinus
ENSCAPG00000004004	-	97	82.934	ENSMICG00000008198	-	96	81.711	Microcebus_murinus
ENSCAPG00000004004	-	97	83.784	ENSMOCG00000000834	Paip1	70	83.784	Microtus_ochrogaster
ENSCAPG00000004004	-	86	54.181	ENSMMOG00000010887	paip1	75	54.181	Mola_mola
ENSCAPG00000004004	-	96	75.150	ENSMODG00000020276	PAIP1	74	75.150	Monodelphis_domestica
ENSCAPG00000004004	-	96	51.064	ENSMALG00000021723	paip1	73	51.064	Monopterus_albus
ENSCAPG00000004004	-	97	83.234	MGP_CAROLIEiJ_G0018925	Paip1	96	78.283	Mus_caroli
ENSCAPG00000004004	-	97	83.234	ENSMUSG00000025451	Paip1	96	78.283	Mus_musculus
ENSCAPG00000004004	-	97	69.162	MGP_PahariEiJ_G0015995	-	96	77.778	Mus_pahari
ENSCAPG00000004004	-	97	83.234	MGP_SPRETEiJ_G0019804	Paip1	96	78.283	Mus_spretus
ENSCAPG00000004004	-	87	72.650	ENSMPUG00000014416	PAIP1	90	72.650	Mustela_putorius_furo
ENSCAPG00000004004	-	97	78.806	ENSMLUG00000016794	PAIP1	70	78.806	Myotis_lucifugus
ENSCAPG00000004004	-	77	57.090	ENSMLUG00000013829	-	82	57.090	Myotis_lucifugus
ENSCAPG00000004004	-	98	81.899	ENSNGAG00000022919	Paip1	70	81.899	Nannospalax_galili
ENSCAPG00000004004	-	88	69.751	ENSNGAG00000006143	-	83	69.751	Nannospalax_galili
ENSCAPG00000004004	-	96	49.848	ENSNBRG00000021188	paip1	89	50.799	Neolamprologus_brichardi
ENSCAPG00000004004	-	97	83.234	ENSNLEG00000010443	PAIP1	96	83.587	Nomascus_leucogenys
ENSCAPG00000004004	-	97	78.144	ENSOPRG00000000386	-	69	78.144	Ochotona_princeps
ENSCAPG00000004004	-	96	77.607	ENSODEG00000007487	-	77	77.607	Octodon_degus
ENSCAPG00000004004	-	88	83.062	ENSODEG00000000445	-	84	83.062	Octodon_degus
ENSCAPG00000004004	-	96	50.456	ENSONIG00000014285	paip1	73	51.064	Oreochromis_niloticus
ENSCAPG00000004004	-	78	72.694	ENSOANG00000007984	-	99	72.694	Ornithorhynchus_anatinus
ENSCAPG00000004004	-	81	78.671	ENSOCUG00000029136	-	98	78.671	Oryctolagus_cuniculus
ENSCAPG00000004004	-	97	83.784	ENSOCUG00000002739	-	69	83.784	Oryctolagus_cuniculus
ENSCAPG00000004004	-	85	56.610	ENSORLG00000001934	paip1	65	56.610	Oryzias_latipes
ENSCAPG00000004004	-	86	56.333	ENSORLG00020007108	paip1	65	56.949	Oryzias_latipes_hni
ENSCAPG00000004004	-	86	56.333	ENSORLG00015016664	paip1	65	56.949	Oryzias_latipes_hsok
ENSCAPG00000004004	-	92	52.147	ENSOMEG00000016193	paip1	73	52.147	Oryzias_melastigma
ENSCAPG00000004004	-	97	83.533	ENSOGAG00000001887	PAIP1	70	83.533	Otolemur_garnettii
ENSCAPG00000004004	-	97	81.306	ENSOARG00000008600	PAIP1	81	81.306	Ovis_aries
ENSCAPG00000004004	-	99	82.405	ENSPPAG00000036736	PAIP1	96	82.301	Pan_paniscus
ENSCAPG00000004004	-	97	83.533	ENSPPRG00000006567	PAIP1	96	82.301	Panthera_pardus
ENSCAPG00000004004	-	99	82.405	ENSPTRG00000016850	PAIP1	96	82.301	Pan_troglodytes
ENSCAPG00000004004	-	97	83.533	ENSPANG00000013349	PAIP1	96	82.301	Papio_anubis
ENSCAPG00000004004	-	95	46.921	ENSPKIG00000020456	paip1	79	48.094	Paramormyrops_kingsleyae
ENSCAPG00000004004	-	88	70.898	ENSPSIG00000018250	PAIP1	85	70.898	Pelodiscus_sinensis
ENSCAPG00000004004	-	80	46.269	ENSPMGG00000012371	paip1	78	46.269	Periophthalmus_magnuspinnatus
ENSCAPG00000004004	-	80	85.145	ENSPEMG00000020312	Paip1	82	85.091	Peromyscus_maniculatus_bairdii
ENSCAPG00000004004	-	98	73.529	ENSPCIG00000024521	PAIP1	96	73.529	Phascolarctos_cinereus
ENSCAPG00000004004	-	86	52.632	ENSPFOG00000015156	paip1	74	52.632	Poecilia_formosa
ENSCAPG00000004004	-	86	53.443	ENSPLAG00000011737	paip1	67	53.443	Poecilia_latipinna
ENSCAPG00000004004	-	86	52.303	ENSPMEG00000003121	paip1	67	52.632	Poecilia_mexicana
ENSCAPG00000004004	-	75	55.344	ENSPREG00000009992	paip1	73	52.759	Poecilia_reticulata
ENSCAPG00000004004	-	99	82.405	ENSPPYG00000015442	PAIP1	85	82.405	Pongo_abelii
ENSCAPG00000004004	-	95	82.317	ENSPCAG00000009997	-	72	82.317	Procavia_capensis
ENSCAPG00000004004	-	97	77.508	ENSPCOG00000020257	PAIP1	96	76.347	Propithecus_coquereli
ENSCAPG00000004004	-	97	81.982	ENSPVAG00000009395	PAIP1	69	81.982	Pteropus_vampyrus
ENSCAPG00000004004	-	96	50.152	ENSPNYG00000005916	paip1	84	47.401	Pundamilia_nyererei
ENSCAPG00000004004	-	88	54.934	ENSPNAG00000021307	paip1	77	54.934	Pygocentrus_nattereri
ENSCAPG00000004004	-	96	83.735	ENSRNOG00000058580	Paip1	84	83.766	Rattus_norvegicus
ENSCAPG00000004004	-	99	82.405	ENSRBIG00000015511	PAIP1	96	82.301	Rhinopithecus_bieti
ENSCAPG00000004004	-	97	83.533	ENSRROG00000043409	PAIP1	96	82.301	Rhinopithecus_roxellana
ENSCAPG00000004004	-	99	77.353	ENSSBOG00000022729	-	97	78.419	Saimiri_boliviensis_boliviensis
ENSCAPG00000004004	-	99	82.111	ENSSBOG00000024593	-	97	81.953	Saimiri_boliviensis_boliviensis
ENSCAPG00000004004	-	97	60.237	ENSSHAG00000009197	PAIP1	82	60.534	Sarcophilus_harrisii
ENSCAPG00000004004	-	86	56.187	ENSSFOG00015019741	paip1	85	56.187	Scleropages_formosus
ENSCAPG00000004004	-	97	49.020	ENSSMAG00000007789	paip1	80	49.020	Scophthalmus_maximus
ENSCAPG00000004004	-	92	53.704	ENSSDUG00000022573	paip1	72	53.704	Seriola_dumerili
ENSCAPG00000004004	-	92	53.704	ENSSLDG00000003742	paip1	72	53.704	Seriola_lalandi_dorsalis
ENSCAPG00000004004	-	79	83.273	ENSSARG00000001463	PAIP1	91	83.273	Sorex_araneus
ENSCAPG00000004004	-	96	70.060	ENSSPUG00000004810	PAIP1	70	70.060	Sphenodon_punctatus
ENSCAPG00000004004	-	86	56.000	ENSSPAG00000009614	paip1	67	56.000	Stegastes_partitus
ENSCAPG00000004004	-	99	81.232	ENSSSCG00000016874	PAIP1	85	81.232	Sus_scrofa
ENSCAPG00000004004	-	96	49.091	ENSTRUG00000016598	paip1	72	49.091	Takifugu_rubripes
ENSCAPG00000004004	-	93	51.064	ENSTNIG00000015937	paip1	72	51.064	Tetraodon_nigroviridis
ENSCAPG00000004004	-	96	73.112	ENSTTRG00000009747	PAIP1	69	73.112	Tursiops_truncatus
ENSCAPG00000004004	-	97	83.832	ENSUMAG00000006992	PAIP1	84	84.444	Ursus_maritimus
ENSCAPG00000004004	-	89	78.317	ENSVPAG00000007067	PAIP1	79	78.317	Vicugna_pacos
ENSCAPG00000004004	-	99	81.525	ENSVVUG00000025408	PAIP1	85	81.525	Vulpes_vulpes
ENSCAPG00000004004	-	96	51.807	ENSXETG00000033268	PAIP1	82	56.274	Xenopus_tropicalis
ENSCAPG00000004004	-	75	54.962	ENSXCOG00000009391	paip1	73	52.759	Xiphophorus_couchianus
ENSCAPG00000004004	-	86	51.645	ENSXMAG00000010142	paip1	67	52.303	Xiphophorus_maculatus