EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000004349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 2914 bases
Position: chrAVPZ01000611.1:4154611-4157524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002016	IBN_N	PF03810.19	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000004822	-	2733	-	ENSCAPP00000002016	910 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000004349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000004349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000004349	-	100	71.368	ENSCAPG00000000237	-	100	71.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000004349	-	100	88.568	ENSG00000124207	CSE1L	100	88.568	Homo_sapiens
ENSCAPG00000004349	-	100	79.403	ENSAPOG00000015943	cse1l	100	79.403	Acanthochromis_polyacanthus
ENSCAPG00000004349	-	100	88.260	ENSAMEG00000013717	CSE1L	100	88.260	Ailuropoda_melanoleuca
ENSCAPG00000004349	-	100	72.287	ENSACIG00000020004	cse1l	100	72.287	Amphilophus_citrinellus
ENSCAPG00000004349	-	100	79.300	ENSAOCG00000004356	cse1l	100	79.300	Amphiprion_ocellaris
ENSCAPG00000004349	-	100	79.403	ENSAPEG00000016588	cse1l	100	79.403	Amphiprion_percula
ENSCAPG00000004349	-	100	79.300	ENSATEG00000005414	cse1l	100	79.300	Anabas_testudineus
ENSCAPG00000004349	-	100	84.758	ENSAPLG00000010368	CSE1L	100	84.758	Anas_platyrhynchos
ENSCAPG00000004349	-	100	83.934	ENSACAG00000015951	CSE1L	100	83.934	Anolis_carolinensis
ENSCAPG00000004349	-	100	86.406	ENSANAG00000023526	CSE1L	100	86.406	Aotus_nancymaae
ENSCAPG00000004349	-	100	75.695	ENSACLG00000023214	cse1l	99	75.901	Astatotilapia_calliptera
ENSCAPG00000004349	-	100	77.961	ENSAMXG00000016416	cse1l	100	77.961	Astyanax_mexicanus
ENSCAPG00000004349	-	100	88.363	ENSBTAG00000005957	CSE1L	100	88.363	Bos_taurus
ENSCAPG00000004349	-	100	88.363	ENSCJAG00000016296	CSE1L	100	88.363	Callithrix_jacchus
ENSCAPG00000004349	-	100	88.465	ENSCAFG00000011260	CSE1L	99	88.465	Canis_familiaris
ENSCAPG00000004349	-	100	87.745	ENSCAFG00020016114	CSE1L	99	87.745	Canis_lupus_dingo
ENSCAPG00000004349	-	100	88.054	ENSCHIG00000016579	CSE1L	100	88.054	Capra_hircus
ENSCAPG00000004349	-	100	88.465	ENSTSYG00000013400	CSE1L	100	88.465	Carlito_syrichta
ENSCAPG00000004349	-	100	89.083	ENSCPOG00000005554	-	100	89.083	Cavia_porcellus
ENSCAPG00000004349	-	100	99.451	ENSCPOG00000023180	-	100	99.451	Cavia_porcellus
ENSCAPG00000004349	-	100	88.465	ENSCCAG00000014373	CSE1L	100	88.465	Cebus_capucinus
ENSCAPG00000004349	-	100	88.568	ENSCATG00000039153	CSE1L	100	88.568	Cercocebus_atys
ENSCAPG00000004349	-	100	86.612	ENSCLAG00000006169	CSE1L	100	86.612	Chinchilla_lanigera
ENSCAPG00000004349	-	100	88.568	ENSCSAG00000014977	CSE1L	100	88.568	Chlorocebus_sabaeus
ENSCAPG00000004349	-	100	86.818	ENSCHOG00000004640	CSE1L	100	86.818	Choloepus_hoffmanni
ENSCAPG00000004349	-	100	85.170	ENSCPBG00000026743	CSE1L	100	85.170	Chrysemys_picta_bellii
ENSCAPG00000004349	-	99	58.229	ENSCING00000002277	-	98	57.708	Ciona_intestinalis
ENSCAPG00000004349	-	99	56.859	ENSCSAVG00000003299	-	98	56.859	Ciona_savignyi
ENSCAPG00000004349	-	100	86.303	ENSCANG00000041300	CSE1L	100	86.303	Colobus_angolensis_palliatus
ENSCAPG00000004349	-	100	88.260	ENSCGRG00001005670	Cse1l	100	88.260	Cricetulus_griseus_chok1gshd
ENSCAPG00000004349	-	100	88.260	ENSCGRG00000012164	Cse1l	100	88.260	Cricetulus_griseus_crigri
ENSCAPG00000004349	-	100	78.064	ENSCSEG00000002471	cse1l	100	78.064	Cynoglossus_semilaevis
ENSCAPG00000004349	-	100	78.888	ENSCVAG00000004319	cse1l	100	78.888	Cyprinodon_variegatus
ENSCAPG00000004349	-	100	77.446	ENSDARG00000006963	cse1l	100	77.446	Danio_rerio
ENSCAPG00000004349	-	100	88.363	ENSDNOG00000014906	CSE1L	100	88.363	Dasypus_novemcinctus
ENSCAPG00000004349	-	100	80.745	ENSDORG00000013960	Cse1l	100	85.289	Dipodomys_ordii
ENSCAPG00000004349	-	99	47.280	FBgn0022213	Cse1	98	47.280	Drosophila_melanogaster
ENSCAPG00000004349	-	72	70.303	ENSEBUG00000011135	cse1l	92	70.303	Eptatretus_burgeri
ENSCAPG00000004349	-	100	88.054	ENSEASG00005023345	CSE1L	100	86.462	Equus_asinus_asinus
ENSCAPG00000004349	-	100	87.848	ENSECAG00000015543	CSE1L	97	87.848	Equus_caballus
ENSCAPG00000004349	-	100	78.785	ENSELUG00000001309	cse1l	100	78.785	Esox_lucius
ENSCAPG00000004349	-	100	88.568	ENSFCAG00000001446	CSE1L	100	88.568	Felis_catus
ENSCAPG00000004349	-	100	84.964	ENSFALG00000012932	CSE1L	97	84.964	Ficedula_albicollis
ENSCAPG00000004349	-	100	88.157	ENSFDAG00000005180	CSE1L	100	88.157	Fukomys_damarensis
ENSCAPG00000004349	-	100	71.368	ENSFHEG00000005939	cse1l	100	71.368	Fundulus_heteroclitus
ENSCAPG00000004349	-	100	76.519	ENSGMOG00000007944	cse1l	100	76.519	Gadus_morhua
ENSCAPG00000004349	-	100	84.552	ENSGALG00000004707	CSE1L	100	84.552	Gallus_gallus
ENSCAPG00000004349	-	100	78.991	ENSGAFG00000021631	cse1l	100	78.991	Gambusia_affinis
ENSCAPG00000004349	-	100	78.373	ENSGACG00000000963	cse1l	100	78.373	Gasterosteus_aculeatus
ENSCAPG00000004349	-	97	85.048	ENSGAGG00000012815	CSE1L	99	85.048	Gopherus_agassizii
ENSCAPG00000004349	-	100	88.568	ENSGGOG00000010875	CSE1L	100	88.568	Gorilla_gorilla
ENSCAPG00000004349	-	100	79.197	ENSHBUG00000013599	cse1l	100	79.197	Haplochromis_burtoni
ENSCAPG00000004349	-	100	88.465	ENSHGLG00000009067	CSE1L	100	88.465	Heterocephalus_glaber_female
ENSCAPG00000004349	-	100	82.896	ENSHGLG00000014944	-	100	82.896	Heterocephalus_glaber_female
ENSCAPG00000004349	-	100	82.513	ENSHGLG00100014942	-	100	82.513	Heterocephalus_glaber_male
ENSCAPG00000004349	-	100	88.465	ENSHGLG00100001243	CSE1L	100	88.465	Heterocephalus_glaber_male
ENSCAPG00000004349	-	98	78.392	ENSHCOG00000005034	cse1l	98	78.392	Hippocampus_comes
ENSCAPG00000004349	-	100	77.755	ENSIPUG00000023752	cse1l	100	77.755	Ictalurus_punctatus
ENSCAPG00000004349	-	100	88.465	ENSSTOG00000003600	CSE1L	100	88.465	Ictidomys_tridecemlineatus
ENSCAPG00000004349	-	100	87.848	ENSJJAG00000016509	Cse1l	100	87.848	Jaculus_jaculus
ENSCAPG00000004349	-	100	79.506	ENSKMAG00000021099	cse1l	100	79.506	Kryptolebias_marmoratus
ENSCAPG00000004349	-	99	79.533	ENSLBEG00000012480	cse1l	96	79.533	Labrus_bergylta
ENSCAPG00000004349	-	100	81.050	ENSLACG00000015970	CSE1L	100	81.050	Latimeria_chalumnae
ENSCAPG00000004349	-	100	79.815	ENSLOCG00000003099	cse1l	100	79.815	Lepisosteus_oculatus
ENSCAPG00000004349	-	100	87.346	ENSLAFG00000006607	CSE1L	100	88.066	Loxodonta_africana
ENSCAPG00000004349	-	100	88.568	ENSMFAG00000034230	CSE1L	100	88.568	Macaca_fascicularis
ENSCAPG00000004349	-	100	86.000	ENSMMUG00000019636	CSE1L	100	86.000	Macaca_mulatta
ENSCAPG00000004349	-	100	88.568	ENSMNEG00000031340	CSE1L	100	88.568	Macaca_nemestrina
ENSCAPG00000004349	-	98	88.957	ENSMLEG00000042388	CSE1L	100	86.251	Mandrillus_leucophaeus
ENSCAPG00000004349	-	100	78.682	ENSMAMG00000023931	cse1l	100	78.682	Mastacembelus_armatus
ENSCAPG00000004349	-	100	79.094	ENSMZEG00005010674	cse1l	100	79.094	Maylandia_zebra
ENSCAPG00000004349	-	100	88.363	ENSMAUG00000001362	Cse1l	100	88.363	Mesocricetus_auratus
ENSCAPG00000004349	-	100	88.157	ENSMICG00000001988	CSE1L	100	88.157	Microcebus_murinus
ENSCAPG00000004349	-	100	88.054	ENSMOCG00000013597	Cse1l	100	88.054	Microtus_ochrogaster
ENSCAPG00000004349	-	100	74.974	ENSMMOG00000021787	cse1l	100	74.974	Mola_mola
ENSCAPG00000004349	-	100	86.509	ENSMODG00000016269	CSE1L	100	86.509	Monodelphis_domestica
ENSCAPG00000004349	-	100	78.064	ENSMALG00000017385	cse1l	100	78.064	Monopterus_albus
ENSCAPG00000004349	-	100	87.745	MGP_CAROLIEiJ_G0024698	Cse1l	100	87.745	Mus_caroli
ENSCAPG00000004349	-	100	87.745	ENSMUSG00000002718	Cse1l	100	87.745	Mus_musculus
ENSCAPG00000004349	-	100	87.436	MGP_PahariEiJ_G0026140	Cse1l	100	87.436	Mus_pahari
ENSCAPG00000004349	-	100	87.745	MGP_SPRETEiJ_G0025618	Cse1l	100	87.745	Mus_spretus
ENSCAPG00000004349	-	100	88.054	ENSMPUG00000017586	CSE1L	99	88.054	Mustela_putorius_furo
ENSCAPG00000004349	-	100	86.303	ENSMLUG00000008368	CSE1L	100	86.303	Myotis_lucifugus
ENSCAPG00000004349	-	100	87.757	ENSNGAG00000001115	Cse1l	100	87.757	Nannospalax_galili
ENSCAPG00000004349	-	100	79.094	ENSNBRG00000005053	cse1l	100	79.094	Neolamprologus_brichardi
ENSCAPG00000004349	-	100	87.333	ENSNLEG00000006945	CSE1L	100	87.333	Nomascus_leucogenys
ENSCAPG00000004349	-	70	76.585	ENSMEUG00000005658	-	71	76.585	Notamacropus_eugenii
ENSCAPG00000004349	-	89	89.593	ENSOPRG00000014530	CSE1L	90	89.593	Ochotona_princeps
ENSCAPG00000004349	-	100	88.363	ENSODEG00000006918	-	100	88.363	Octodon_degus
ENSCAPG00000004349	-	100	79.403	ENSONIG00000018970	cse1l	100	79.403	Oreochromis_niloticus
ENSCAPG00000004349	-	100	85.273	ENSOANG00000006402	CSE1L	99	85.273	Ornithorhynchus_anatinus
ENSCAPG00000004349	-	100	87.860	ENSOCUG00000005459	CSE1L	100	87.860	Oryctolagus_cuniculus
ENSCAPG00000004349	-	100	78.888	ENSORLG00000000603	cse1l	100	78.888	Oryzias_latipes
ENSCAPG00000004349	-	100	71.549	ENSORLG00020007653	cse1l	100	71.549	Oryzias_latipes_hni
ENSCAPG00000004349	-	54	81.154	ENSORLG00015003694	cse1l	93	81.154	Oryzias_latipes_hsok
ENSCAPG00000004349	-	100	79.094	ENSOMEG00000014357	cse1l	100	79.094	Oryzias_melastigma
ENSCAPG00000004349	-	100	86.462	ENSOGAG00000002126	CSE1L	100	86.462	Otolemur_garnettii
ENSCAPG00000004349	-	100	88.066	ENSOARG00000012031	CSE1L	100	88.066	Ovis_aries
ENSCAPG00000004349	-	100	88.568	ENSPPAG00000038391	CSE1L	100	88.568	Pan_paniscus
ENSCAPG00000004349	-	100	88.568	ENSPPRG00000022681	CSE1L	100	88.568	Panthera_pardus
ENSCAPG00000004349	-	100	88.568	ENSPTIG00000011919	CSE1L	99	88.568	Panthera_tigris_altaica
ENSCAPG00000004349	-	100	88.568	ENSPTRG00000013599	CSE1L	100	88.568	Pan_troglodytes
ENSCAPG00000004349	-	100	89.146	ENSPANG00000026147	CSE1L	100	89.146	Papio_anubis
ENSCAPG00000004349	-	100	78.991	ENSPKIG00000024520	cse1l	100	78.991	Paramormyrops_kingsleyae
ENSCAPG00000004349	-	100	85.582	ENSPSIG00000010864	CSE1L	99	85.582	Pelodiscus_sinensis
ENSCAPG00000004349	-	100	88.363	ENSPEMG00000000944	Cse1l	100	88.363	Peromyscus_maniculatus_bairdii
ENSCAPG00000004349	-	100	86.509	ENSPCIG00000023472	CSE1L	100	86.509	Phascolarctos_cinereus
ENSCAPG00000004349	-	100	79.609	ENSPFOG00000001989	cse1l	100	79.609	Poecilia_formosa
ENSCAPG00000004349	-	100	79.506	ENSPLAG00000015012	cse1l	100	79.506	Poecilia_latipinna
ENSCAPG00000004349	-	100	79.609	ENSPMEG00000022671	cse1l	100	79.609	Poecilia_mexicana
ENSCAPG00000004349	-	100	79.403	ENSPREG00000009081	cse1l	100	79.403	Poecilia_reticulata
ENSCAPG00000004349	-	100	88.568	ENSPPYG00000011110	CSE1L	100	88.568	Pongo_abelii
ENSCAPG00000004349	-	77	94.652	ENSPCAG00000007508	CSE1L	80	94.652	Procavia_capensis
ENSCAPG00000004349	-	90	89.184	ENSPCOG00000026411	CSE1L	100	89.184	Propithecus_coquereli
ENSCAPG00000004349	-	99	86.243	ENSPVAG00000015014	CSE1L	99	86.243	Pteropus_vampyrus
ENSCAPG00000004349	-	100	79.300	ENSPNYG00000007058	cse1l	100	79.300	Pundamilia_nyererei
ENSCAPG00000004349	-	100	77.549	ENSPNAG00000012903	cse1l	100	77.549	Pygocentrus_nattereri
ENSCAPG00000004349	-	100	87.024	ENSRNOG00000007665	Cse1l	100	87.024	Rattus_norvegicus
ENSCAPG00000004349	-	100	88.568	ENSRBIG00000029361	CSE1L	100	88.568	Rhinopithecus_bieti
ENSCAPG00000004349	-	100	88.568	ENSRROG00000021686	CSE1L	100	88.568	Rhinopithecus_roxellana
ENSCAPG00000004349	-	95	34.059	YGL238W	CSE1	91	34.537	Saccharomyces_cerevisiae
ENSCAPG00000004349	-	100	88.465	ENSSBOG00000021396	CSE1L	100	88.465	Saimiri_boliviensis_boliviensis
ENSCAPG00000004349	-	100	78.167	ENSSFOG00015021428	cse1l	100	78.167	Scleropages_formosus
ENSCAPG00000004349	-	100	78.785	ENSSMAG00000000580	cse1l	96	78.785	Scophthalmus_maximus
ENSCAPG00000004349	-	100	79.094	ENSSDUG00000012110	cse1l	100	79.094	Seriola_dumerili
ENSCAPG00000004349	-	100	79.094	ENSSLDG00000022083	cse1l	100	79.094	Seriola_lalandi_dorsalis
ENSCAPG00000004349	-	100	85.067	ENSSPUG00000017941	CSE1L	100	85.067	Sphenodon_punctatus
ENSCAPG00000004349	-	100	79.094	ENSSPAG00000008182	cse1l	100	79.094	Stegastes_partitus
ENSCAPG00000004349	-	100	88.568	ENSSSCG00000025534	CSE1L	99	88.636	Sus_scrofa
ENSCAPG00000004349	-	100	84.552	ENSTGUG00000008823	CSE1L	100	84.552	Taeniopygia_guttata
ENSCAPG00000004349	-	98	77.623	ENSTRUG00000005496	cse1l	97	77.623	Takifugu_rubripes
ENSCAPG00000004349	-	99	79.471	ENSTNIG00000014631	cse1l	97	79.471	Tetraodon_nigroviridis
ENSCAPG00000004349	-	100	79.918	ENSTBEG00000008338	CSE1L	100	79.918	Tupaia_belangeri
ENSCAPG00000004349	-	91	85.961	ENSTTRG00000004279	CSE1L	91	85.961	Tursiops_truncatus
ENSCAPG00000004349	-	100	88.054	ENSUAMG00000025448	CSE1L	99	88.054	Ursus_americanus
ENSCAPG00000004349	-	100	88.054	ENSUMAG00000024476	CSE1L	99	88.054	Ursus_maritimus
ENSCAPG00000004349	-	100	85.212	ENSVPAG00000001312	CSE1L	100	85.212	Vicugna_pacos
ENSCAPG00000004349	-	100	88.465	ENSVVUG00000022322	CSE1L	99	88.465	Vulpes_vulpes
ENSCAPG00000004349	-	100	78.682	ENSXETG00000001784	cse1l	100	78.682	Xenopus_tropicalis
ENSCAPG00000004349	-	100	73.762	ENSXCOG00000000805	cse1l	100	73.762	Xiphophorus_couchianus
ENSCAPG00000004349	-	100	79.300	ENSXMAG00000001306	cse1l	100	79.300	Xiphophorus_maculatus