EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000004813 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 5280 bases
Position: chrAVPZ01000733.1:5654735-5660014
Accession: 18466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002185	RNase_H	PF00075.24	5.3e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000005316	RNASEH1-201	726	-	ENSCAPP00000002185	242 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000004813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000004813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000004813	RNASEH1	99	81.893	ENSG00000171865	RNASEH1	85	81.893	Homo_sapiens
ENSCAPG00000004813	RNASEH1	99	54.510	ENSAPOG00000000412	rnaseh1	83	55.159	Acanthochromis_polyacanthus
ENSCAPG00000004813	RNASEH1	99	82.305	ENSAMEG00000018433	RNASEH1	85	82.305	Ailuropoda_melanoleuca
ENSCAPG00000004813	RNASEH1	99	55.777	ENSACIG00000014666	rnaseh1	82	55.777	Amphilophus_citrinellus
ENSCAPG00000004813	RNASEH1	99	56.078	ENSAOCG00000015210	rnaseh1	83	56.078	Amphiprion_ocellaris
ENSCAPG00000004813	RNASEH1	99	56.471	ENSAPEG00000014104	rnaseh1	83	56.471	Amphiprion_percula
ENSCAPG00000004813	RNASEH1	99	56.349	ENSATEG00000000598	rnaseh1	88	56.349	Anabas_testudineus
ENSCAPG00000004813	RNASEH1	97	61.200	ENSAPLG00000001961	RNASEH1	97	61.200	Anas_platyrhynchos
ENSCAPG00000004813	RNASEH1	97	53.455	ENSACAG00000016857	rnaseh1	85	53.455	Anolis_carolinensis
ENSCAPG00000004813	RNASEH1	99	84.774	ENSANAG00000024055	RNASEH1	85	84.774	Aotus_nancymaae
ENSCAPG00000004813	RNASEH1	99	53.937	ENSACLG00000006741	rnaseh1	82	55.512	Astatotilapia_calliptera
ENSCAPG00000004813	RNASEH1	99	52.500	ENSAMXG00000042940	rnaseh1	91	51.600	Astyanax_mexicanus
ENSCAPG00000004813	RNASEH1	99	85.185	ENSBTAG00000016235	RNASEH1	86	85.185	Bos_taurus
ENSCAPG00000004813	RNASEH1	98	40.084	WBGene00004382	rnh-1.0	89	40.084	Caenorhabditis_elegans
ENSCAPG00000004813	RNASEH1	99	82.186	ENSCJAG00000035450	RNASEH1	85	82.186	Callithrix_jacchus
ENSCAPG00000004813	RNASEH1	99	83.128	ENSCAFG00000003259	RNASEH1	85	83.128	Canis_familiaris
ENSCAPG00000004813	RNASEH1	64	88.312	ENSCAFG00020004994	RNASEH1	99	88.312	Canis_lupus_dingo
ENSCAPG00000004813	RNASEH1	98	69.874	ENSCHIG00000022230	-	100	69.874	Capra_hircus
ENSCAPG00000004813	RNASEH1	99	85.185	ENSCHIG00000022264	-	85	85.185	Capra_hircus
ENSCAPG00000004813	RNASEH1	100	83.197	ENSTSYG00000012926	RNASEH1	84	83.197	Carlito_syrichta
ENSCAPG00000004813	RNASEH1	100	100.000	ENSCPOG00000022278	Rnaseh1	82	100.000	Cavia_porcellus
ENSCAPG00000004813	RNASEH1	99	82.996	ENSCCAG00000038017	RNASEH1	85	82.996	Cebus_capucinus
ENSCAPG00000004813	RNASEH1	99	74.486	ENSCATG00000016818	-	84	74.486	Cercocebus_atys
ENSCAPG00000004813	RNASEH1	99	81.481	ENSCATG00000016515	-	85	81.481	Cercocebus_atys
ENSCAPG00000004813	RNASEH1	99	92.116	ENSCLAG00000002440	RNASEH1	85	92.116	Chinchilla_lanigera
ENSCAPG00000004813	RNASEH1	99	81.070	ENSCSAG00000006943	RNASEH1	85	81.070	Chlorocebus_sabaeus
ENSCAPG00000004813	RNASEH1	81	81.218	ENSCHOG00000008547	RNASEH1	97	81.218	Choloepus_hoffmanni
ENSCAPG00000004813	RNASEH1	97	64.000	ENSCPBG00000021620	RNASEH1	92	64.000	Chrysemys_picta_bellii
ENSCAPG00000004813	RNASEH1	98	38.403	ENSCING00000014054	-	86	38.403	Ciona_intestinalis
ENSCAPG00000004813	RNASEH1	81	37.321	ENSCSAVG00000000009	-	88	37.321	Ciona_savignyi
ENSCAPG00000004813	RNASEH1	99	81.893	ENSCANG00000037763	RNASEH1	85	81.893	Colobus_angolensis_palliatus
ENSCAPG00000004813	RNASEH1	99	80.247	ENSCGRG00001008950	Rnaseh1	85	80.658	Cricetulus_griseus_chok1gshd
ENSCAPG00000004813	RNASEH1	99	80.247	ENSCGRG00000006029	Rnaseh1	85	80.658	Cricetulus_griseus_crigri
ENSCAPG00000004813	RNASEH1	98	52.282	ENSCSEG00000005741	rnaseh1	87	52.362	Cynoglossus_semilaevis
ENSCAPG00000004813	RNASEH1	99	56.000	ENSCVAG00000018717	rnaseh1	82	56.000	Cyprinodon_variegatus
ENSCAPG00000004813	RNASEH1	98	54.762	ENSDARG00000042571	rnaseh1	91	54.762	Danio_rerio
ENSCAPG00000004813	RNASEH1	99	78.601	ENSDNOG00000016056	RNASEH1	85	78.601	Dasypus_novemcinctus
ENSCAPG00000004813	RNASEH1	99	83.539	ENSDORG00000000704	Rnaseh1	85	83.539	Dipodomys_ordii
ENSCAPG00000004813	RNASEH1	97	35.294	FBgn0023171	rnh1	87	35.294	Drosophila_melanogaster
ENSCAPG00000004813	RNASEH1	99	74.486	ENSETEG00000012674	RNASEH1	85	74.486	Echinops_telfairi
ENSCAPG00000004813	RNASEH1	97	45.588	ENSEBUG00000008898	rnaseh1	91	45.588	Eptatretus_burgeri
ENSCAPG00000004813	RNASEH1	98	46.444	ENSEBUG00000006116	rnaseh1	73	46.444	Eptatretus_burgeri
ENSCAPG00000004813	RNASEH1	99	81.481	ENSEASG00005022200	RNASEH1	83	81.481	Equus_asinus_asinus
ENSCAPG00000004813	RNASEH1	99	81.481	ENSECAG00000020695	RNASEH1	83	81.481	Equus_caballus
ENSCAPG00000004813	RNASEH1	98	55.200	ENSELUG00000010112	rnaseh1	84	55.200	Esox_lucius
ENSCAPG00000004813	RNASEH1	99	82.305	ENSFCAG00000025832	RNASEH1	85	82.305	Felis_catus
ENSCAPG00000004813	RNASEH1	99	59.387	ENSFALG00000002069	RNASEH1	87	59.387	Ficedula_albicollis
ENSCAPG00000004813	RNASEH1	99	87.552	ENSFDAG00000002035	RNASEH1	75	87.552	Fukomys_damarensis
ENSCAPG00000004813	RNASEH1	98	55.918	ENSGMOG00000013818	rnaseh1	82	55.918	Gadus_morhua
ENSCAPG00000004813	RNASEH1	97	60.317	ENSGALG00000016389	RNASEH1	85	60.317	Gallus_gallus
ENSCAPG00000004813	RNASEH1	98	55.600	ENSGAFG00000001776	rnaseh1	84	55.600	Gambusia_affinis
ENSCAPG00000004813	RNASEH1	98	54.251	ENSGACG00000011935	rnaseh1	83	53.815	Gasterosteus_aculeatus
ENSCAPG00000004813	RNASEH1	97	61.600	ENSGAGG00000009150	RNASEH1	57	62.400	Gopherus_agassizii
ENSCAPG00000004813	RNASEH1	99	81.070	ENSGGOG00000034822	RNASEH1	85	81.070	Gorilla_gorilla
ENSCAPG00000004813	RNASEH1	99	53.150	ENSHBUG00000004666	rnaseh1	82	55.118	Haplochromis_burtoni
ENSCAPG00000004813	RNASEH1	99	90.000	ENSHGLG00000002585	Rnaseh1	78	90.000	Heterocephalus_glaber_female
ENSCAPG00000004813	RNASEH1	99	90.000	ENSHGLG00100005105	Rnaseh1	78	90.000	Heterocephalus_glaber_male
ENSCAPG00000004813	RNASEH1	98	54.331	ENSHCOG00000012329	rnaseh1	82	54.331	Hippocampus_comes
ENSCAPG00000004813	RNASEH1	99	62.500	ENSIPUG00000023060	rnaseh1	90	62.500	Ictalurus_punctatus
ENSCAPG00000004813	RNASEH1	99	83.539	ENSSTOG00000012774	RNASEH1	86	83.539	Ictidomys_tridecemlineatus
ENSCAPG00000004813	RNASEH1	99	73.444	ENSJJAG00000021481	-	84	73.444	Jaculus_jaculus
ENSCAPG00000004813	RNASEH1	88	79.812	ENSJJAG00000020238	Rnaseh1	83	79.812	Jaculus_jaculus
ENSCAPG00000004813	RNASEH1	99	67.220	ENSJJAG00000008994	-	86	67.220	Jaculus_jaculus
ENSCAPG00000004813	RNASEH1	99	56.000	ENSKMAG00000001373	rnaseh1	83	56.000	Kryptolebias_marmoratus
ENSCAPG00000004813	RNASEH1	99	53.571	ENSLBEG00000004480	rnaseh1	88	54.217	Labrus_bergylta
ENSCAPG00000004813	RNASEH1	99	54.264	ENSLACG00000007100	RNASEH1	83	55.039	Latimeria_chalumnae
ENSCAPG00000004813	RNASEH1	99	56.299	ENSLOCG00000017212	rnaseh1	91	56.299	Lepisosteus_oculatus
ENSCAPG00000004813	RNASEH1	99	78.926	ENSLAFG00000015091	RNASEH1	84	78.926	Loxodonta_africana
ENSCAPG00000004813	RNASEH1	99	81.481	ENSMFAG00000000063	-	85	81.481	Macaca_fascicularis
ENSCAPG00000004813	RNASEH1	99	74.074	ENSMFAG00000002323	-	84	74.074	Macaca_fascicularis
ENSCAPG00000004813	RNASEH1	99	73.663	ENSMMUG00000019280	-	84	73.663	Macaca_mulatta
ENSCAPG00000004813	RNASEH1	99	81.893	ENSMNEG00000040183	-	85	81.893	Macaca_nemestrina
ENSCAPG00000004813	RNASEH1	99	74.897	ENSMNEG00000029676	-	84	74.897	Macaca_nemestrina
ENSCAPG00000004813	RNASEH1	99	81.481	ENSMLEG00000039352	-	100	81.481	Mandrillus_leucophaeus
ENSCAPG00000004813	RNASEH1	99	76.955	ENSMLEG00000028662	-	84	76.955	Mandrillus_leucophaeus
ENSCAPG00000004813	RNASEH1	99	56.746	ENSMAMG00000019725	rnaseh1	88	56.746	Mastacembelus_armatus
ENSCAPG00000004813	RNASEH1	99	53.937	ENSMZEG00005013006	rnaseh1	82	55.512	Maylandia_zebra
ENSCAPG00000004813	RNASEH1	93	59.671	ENSMGAG00000013979	RNASEH1	98	59.671	Meleagris_gallopavo
ENSCAPG00000004813	RNASEH1	99	80.992	ENSMAUG00000014957	Rnaseh1	85	80.992	Mesocricetus_auratus
ENSCAPG00000004813	RNASEH1	100	84.836	ENSMICG00000033156	RNASEH1	84	84.836	Microcebus_murinus
ENSCAPG00000004813	RNASEH1	99	78.455	ENSMOCG00000015522	Rnaseh1	85	78.455	Microtus_ochrogaster
ENSCAPG00000004813	RNASEH1	98	54.065	ENSMMOG00000015902	rnaseh1	81	54.065	Mola_mola
ENSCAPG00000004813	RNASEH1	93	60.793	ENSMODG00000028814	-	92	61.233	Monodelphis_domestica
ENSCAPG00000004813	RNASEH1	99	70.902	ENSMODG00000014491	-	84	70.902	Monodelphis_domestica
ENSCAPG00000004813	RNASEH1	99	54.902	ENSMALG00000010565	rnaseh1	83	54.902	Monopterus_albus
ENSCAPG00000004813	RNASEH1	99	79.835	MGP_CAROLIEiJ_G0017660	Rnaseh1	85	79.835	Mus_caroli
ENSCAPG00000004813	RNASEH1	99	80.247	ENSMUSG00000020630	Rnaseh1	85	80.247	Mus_musculus
ENSCAPG00000004813	RNASEH1	99	80.165	MGP_PahariEiJ_G0029418	Rnaseh1	85	80.165	Mus_pahari
ENSCAPG00000004813	RNASEH1	99	80.247	MGP_SPRETEiJ_G0018502	Rnaseh1	85	80.247	Mus_spretus
ENSCAPG00000004813	RNASEH1	83	81.095	ENSMPUG00000012984	RNASEH1	97	81.095	Mustela_putorius_furo
ENSCAPG00000004813	RNASEH1	99	81.557	ENSNGAG00000015966	Rnaseh1	80	81.557	Nannospalax_galili
ENSCAPG00000004813	RNASEH1	99	54.331	ENSNBRG00000008739	rnaseh1	82	55.906	Neolamprologus_brichardi
ENSCAPG00000004813	RNASEH1	99	67.755	ENSNLEG00000015400	RNASEH1	83	67.755	Nomascus_leucogenys
ENSCAPG00000004813	RNASEH1	89	73.394	ENSNLEG00000000059	-	81	73.394	Nomascus_leucogenys
ENSCAPG00000004813	RNASEH1	98	47.083	ENSMEUG00000003610	-	84	47.083	Notamacropus_eugenii
ENSCAPG00000004813	RNASEH1	99	77.869	ENSOPRG00000005072	RNASEH1	85	77.869	Ochotona_princeps
ENSCAPG00000004813	RNASEH1	99	88.382	ENSODEG00000000235	Rnaseh1	82	88.382	Octodon_degus
ENSCAPG00000004813	RNASEH1	99	55.512	ENSONIG00000018697	rnaseh1	91	55.512	Oreochromis_niloticus
ENSCAPG00000004813	RNASEH1	99	81.481	ENSOCUG00000006117	RNASEH1	85	81.481	Oryctolagus_cuniculus
ENSCAPG00000004813	RNASEH1	99	58.065	ENSORLG00000018127	rnaseh1	89	58.065	Oryzias_latipes
ENSCAPG00000004813	RNASEH1	99	58.065	ENSORLG00020013660	rnaseh1	82	58.065	Oryzias_latipes_hni
ENSCAPG00000004813	RNASEH1	99	58.468	ENSORLG00015011338	rnaseh1	82	58.468	Oryzias_latipes_hsok
ENSCAPG00000004813	RNASEH1	88	54.545	ENSOMEG00000004710	rnaseh1	83	54.545	Oryzias_melastigma
ENSCAPG00000004813	RNASEH1	99	82.787	ENSOGAG00000017176	RNASEH1	85	82.787	Otolemur_garnettii
ENSCAPG00000004813	RNASEH1	99	71.486	ENSOARG00000005386	RNASEH1	85	71.486	Ovis_aries
ENSCAPG00000004813	RNASEH1	99	81.893	ENSPPAG00000034221	RNASEH1	85	81.893	Pan_paniscus
ENSCAPG00000004813	RNASEH1	99	81.893	ENSPPRG00000015513	RNASEH1	85	81.893	Panthera_pardus
ENSCAPG00000004813	RNASEH1	99	81.893	ENSPTIG00000019034	RNASEH1	85	81.893	Panthera_tigris_altaica
ENSCAPG00000004813	RNASEH1	99	81.893	ENSPTRG00000011614	RNASEH1	85	81.893	Pan_troglodytes
ENSCAPG00000004813	RNASEH1	90	74.554	ENSPTRG00000043403	-	85	74.554	Pan_troglodytes
ENSCAPG00000004813	RNASEH1	99	71.193	ENSPANG00000018246	-	84	71.193	Papio_anubis
ENSCAPG00000004813	RNASEH1	99	81.481	ENSPANG00000000443	RNASEH1	99	81.481	Papio_anubis
ENSCAPG00000004813	RNASEH1	97	51.867	ENSPKIG00000003146	rnaseh1	91	51.029	Paramormyrops_kingsleyae
ENSCAPG00000004813	RNASEH1	97	62.249	ENSPSIG00000002937	RNASEH1	92	62.249	Pelodiscus_sinensis
ENSCAPG00000004813	RNASEH1	98	54.959	ENSPMGG00000017463	rnaseh1	83	54.959	Periophthalmus_magnuspinnatus
ENSCAPG00000004813	RNASEH1	99	78.279	ENSPEMG00000022465	-	85	79.098	Peromyscus_maniculatus_bairdii
ENSCAPG00000004813	RNASEH1	61	42.282	ENSPCIG00000026047	-	83	42.857	Phascolarctos_cinereus
ENSCAPG00000004813	RNASEH1	99	69.672	ENSPCIG00000023334	-	84	69.672	Phascolarctos_cinereus
ENSCAPG00000004813	RNASEH1	97	57.317	ENSPFOG00000002841	rnaseh1	83	57.317	Poecilia_formosa
ENSCAPG00000004813	RNASEH1	68	50.296	ENSPLAG00000021349	-	67	50.296	Poecilia_latipinna
ENSCAPG00000004813	RNASEH1	97	56.911	ENSPMEG00000016826	rnaseh1	83	56.911	Poecilia_mexicana
ENSCAPG00000004813	RNASEH1	97	55.556	ENSPREG00000012197	rnaseh1	83	55.556	Poecilia_reticulata
ENSCAPG00000004813	RNASEH1	89	77.523	ENSPPYG00000008067	-	84	77.523	Pongo_abelii
ENSCAPG00000004813	RNASEH1	99	69.959	ENSPPYG00000025873	RNASEH1	83	69.959	Pongo_abelii
ENSCAPG00000004813	RNASEH1	99	76.349	ENSPCAG00000002500	RNASEH1	84	76.349	Procavia_capensis
ENSCAPG00000004813	RNASEH1	100	74.590	ENSPCOG00000019444	RNASEH1	84	74.590	Propithecus_coquereli
ENSCAPG00000004813	RNASEH1	99	79.339	ENSPVAG00000002070	RNASEH1	85	79.339	Pteropus_vampyrus
ENSCAPG00000004813	RNASEH1	99	53.543	ENSPNYG00000001292	rnaseh1	82	55.118	Pundamilia_nyererei
ENSCAPG00000004813	RNASEH1	99	59.756	ENSPNAG00000022344	rnaseh1	84	59.756	Pygocentrus_nattereri
ENSCAPG00000004813	RNASEH1	99	80.165	ENSRNOG00000008584	Rnaseh1	85	80.165	Rattus_norvegicus
ENSCAPG00000004813	RNASEH1	99	81.481	ENSRBIG00000034222	RNASEH1	84	81.481	Rhinopithecus_bieti
ENSCAPG00000004813	RNASEH1	99	81.481	ENSRROG00000041761	RNASEH1	84	81.481	Rhinopithecus_roxellana
ENSCAPG00000004813	RNASEH1	99	82.591	ENSSBOG00000025411	RNASEH1	85	82.591	Saimiri_boliviensis_boliviensis
ENSCAPG00000004813	RNASEH1	99	72.951	ENSSHAG00000013051	RNASEH1	83	72.951	Sarcophilus_harrisii
ENSCAPG00000004813	RNASEH1	99	51.737	ENSSFOG00015002709	rnaseh1	85	51.737	Scleropages_formosus
ENSCAPG00000004813	RNASEH1	99	55.556	ENSSMAG00000007586	rnaseh1	82	55.556	Scophthalmus_maximus
ENSCAPG00000004813	RNASEH1	99	54.183	ENSSDUG00000008217	rnaseh1	88	54.582	Seriola_dumerili
ENSCAPG00000004813	RNASEH1	99	55.556	ENSSLDG00000000442	rnaseh1	94	55.556	Seriola_lalandi_dorsalis
ENSCAPG00000004813	RNASEH1	98	59.449	ENSSPUG00000006644	RNASEH1	86	59.449	Sphenodon_punctatus
ENSCAPG00000004813	RNASEH1	99	56.175	ENSSPAG00000009353	rnaseh1	82	56.574	Stegastes_partitus
ENSCAPG00000004813	RNASEH1	99	81.328	ENSSSCG00000025305	RNASEH1	84	81.328	Sus_scrofa
ENSCAPG00000004813	RNASEH1	98	58.915	ENSTGUG00000012980	RNASEH1	86	59.302	Taeniopygia_guttata
ENSCAPG00000004813	RNASEH1	99	54.365	ENSTRUG00000015774	rnaseh1	90	54.365	Takifugu_rubripes
ENSCAPG00000004813	RNASEH1	99	57.480	ENSTNIG00000010715	rnaseh1	90	57.480	Tetraodon_nigroviridis
ENSCAPG00000004813	RNASEH1	99	76.955	ENSTTRG00000001615	RNASEH1	85	76.955	Tursiops_truncatus
ENSCAPG00000004813	RNASEH1	64	87.662	ENSUAMG00000018254	RNASEH1	80	87.662	Ursus_americanus
ENSCAPG00000004813	RNASEH1	79	79.688	ENSUMAG00000003941	RNASEH1	63	79.688	Ursus_maritimus
ENSCAPG00000004813	RNASEH1	99	69.008	ENSVPAG00000011589	RNASEH1	85	69.008	Vicugna_pacos
ENSCAPG00000004813	RNASEH1	99	84.362	ENSVVUG00000008633	RNASEH1	76	84.362	Vulpes_vulpes
ENSCAPG00000004813	RNASEH1	98	53.386	ENSXETG00000001212	rnaseh1	85	54.400	Xenopus_tropicalis
ENSCAPG00000004813	RNASEH1	98	44.304	ENSXETG00000030371	-	91	44.304	Xenopus_tropicalis
ENSCAPG00000004813	RNASEH1	97	54.217	ENSXMAG00000002357	rnaseh1	83	54.217	Xiphophorus_maculatus