EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000005150 (Gene tree)
Gene ID: -
Gene Symbol: PPARGC1A
Alias: PGC-1alpha|PGC1|PGC1A|PPARGC1
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 85694 bases
Position: chrAVPZ01000456.1:10637152-10722845
Accession: 9237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002329	RRM_1	PF00076.22	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000005739	PPARGC1A-201	2379	-	ENSCAPP00000002329	792 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000005150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000005150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000005150	PPARGC1A	96	92.718	ENSG00000109819	PPARGC1A	100	91.654	Homo_sapiens
ENSCAPG00000005150	PPARGC1A	64	79.581	ENSAPOG00000018632	ppargc1a	53	83.537	Acanthochromis_polyacanthus
ENSCAPG00000005150	PPARGC1A	96	91.157	ENSAMEG00000010421	PPARGC1A	97	91.157	Ailuropoda_melanoleuca
ENSCAPG00000005150	PPARGC1A	64	80.105	ENSAOCG00000006754	ppargc1a	57	84.146	Amphiprion_ocellaris
ENSCAPG00000005150	PPARGC1A	84	69.159	ENSATEG00000016702	ppargc1a	87	81.707	Anabas_testudineus
ENSCAPG00000005150	PPARGC1A	96	84.135	ENSAPLG00000005303	PPARGC1A	97	84.135	Anas_platyrhynchos
ENSCAPG00000005150	PPARGC1A	58	51.163	ENSAPLG00000009977	PPARGC1B	66	49.635	Anas_platyrhynchos
ENSCAPG00000005150	PPARGC1A	96	78.729	ENSACAG00000000741	PPARGC1A	97	78.729	Anolis_carolinensis
ENSCAPG00000005150	PPARGC1A	100	89.788	ENSANAG00000035930	PPARGC1A	100	89.788	Aotus_nancymaae
ENSCAPG00000005150	PPARGC1A	82	77.487	ENSACLG00000001002	ppargc1a	73	81.707	Astatotilapia_calliptera
ENSCAPG00000005150	PPARGC1A	91	67.980	ENSAMXG00000002461	ppargc1a	86	79.878	Astyanax_mexicanus
ENSCAPG00000005150	PPARGC1A	96	88.312	ENSBTAG00000017024	PPARGC1A	98	89.091	Bos_taurus
ENSCAPG00000005150	PPARGC1A	65	51.145	ENSBTAG00000012943	PPARGC1B	51	51.145	Bos_taurus
ENSCAPG00000005150	PPARGC1A	96	92.198	ENSCJAG00000013024	PPARGC1A	97	92.198	Callithrix_jacchus
ENSCAPG00000005150	PPARGC1A	96	91.417	ENSCAFG00000016519	PPARGC1A	97	91.417	Canis_familiaris
ENSCAPG00000005150	PPARGC1A	96	91.417	ENSCAFG00020027242	PPARGC1A	99	91.417	Canis_lupus_dingo
ENSCAPG00000005150	PPARGC1A	96	89.987	ENSCHIG00000015991	PPARGC1A	98	89.221	Capra_hircus
ENSCAPG00000005150	PPARGC1A	52	49.618	ENSCHIG00000004409	PPARGC1B	50	49.618	Capra_hircus
ENSCAPG00000005150	PPARGC1A	64	48.092	ENSTSYG00000034354	PPARGC1B	52	48.092	Carlito_syrichta
ENSCAPG00000005150	PPARGC1A	96	93.238	ENSTSYG00000010439	PPARGC1A	100	92.250	Carlito_syrichta
ENSCAPG00000005150	PPARGC1A	96	96.489	ENSCPOG00000001518	PPARGC1A	97	96.489	Cavia_porcellus
ENSCAPG00000005150	PPARGC1A	53	48.120	ENSCPOG00000001958	PPARGC1B	50	48.120	Cavia_porcellus
ENSCAPG00000005150	PPARGC1A	96	91.938	ENSCCAG00000024681	PPARGC1A	96	91.938	Cebus_capucinus
ENSCAPG00000005150	PPARGC1A	96	92.588	ENSCATG00000032575	PPARGC1A	100	91.505	Cercocebus_atys
ENSCAPG00000005150	PPARGC1A	96	93.498	ENSCLAG00000002058	PPARGC1A	97	93.498	Chinchilla_lanigera
ENSCAPG00000005150	PPARGC1A	63	49.630	ENSCLAG00000015452	PPARGC1B	52	49.630	Chinchilla_lanigera
ENSCAPG00000005150	PPARGC1A	96	92.588	ENSCSAG00000016575	PPARGC1A	96	92.588	Chlorocebus_sabaeus
ENSCAPG00000005150	PPARGC1A	51	51.908	ENSCSAG00000011792	PPARGC1B	50	51.908	Chlorocebus_sabaeus
ENSCAPG00000005150	PPARGC1A	52	50.000	ENSCPBG00000007891	PPARGC1B	54	50.000	Chrysemys_picta_bellii
ENSCAPG00000005150	PPARGC1A	96	92.718	ENSCANG00000033426	PPARGC1A	96	92.718	Colobus_angolensis_palliatus
ENSCAPG00000005150	PPARGC1A	53	51.136	ENSCGRG00001017949	Ppargc1b	59	48.905	Cricetulus_griseus_chok1gshd
ENSCAPG00000005150	PPARGC1A	96	90.247	ENSCGRG00001015534	Ppargc1a	97	90.247	Cricetulus_griseus_chok1gshd
ENSCAPG00000005150	PPARGC1A	53	51.136	ENSCGRG00000008387	Ppargc1b	61	48.905	Cricetulus_griseus_crigri
ENSCAPG00000005150	PPARGC1A	96	90.247	ENSCGRG00000000200	Ppargc1a	97	90.247	Cricetulus_griseus_crigri
ENSCAPG00000005150	PPARGC1A	63	81.818	ENSCSEG00000006884	ppargc1a	73	81.707	Cynoglossus_semilaevis
ENSCAPG00000005150	PPARGC1A	65	44.186	ENSCVAG00000016547	ppargc1a	58	78.049	Cyprinodon_variegatus
ENSCAPG00000005150	PPARGC1A	84	79.213	ENSDARG00000067829	ppargc1a	86	81.098	Danio_rerio
ENSCAPG00000005150	PPARGC1A	96	91.417	ENSDNOG00000041106	PPARGC1A	97	91.417	Dasypus_novemcinctus
ENSCAPG00000005150	PPARGC1A	96	91.547	ENSDORG00000016276	Ppargc1a	96	91.547	Dipodomys_ordii
ENSCAPG00000005150	PPARGC1A	96	92.198	ENSEASG00005007984	PPARGC1A	97	92.198	Equus_asinus_asinus
ENSCAPG00000005150	PPARGC1A	96	92.198	ENSECAG00000009164	PPARGC1A	96	92.198	Equus_caballus
ENSCAPG00000005150	PPARGC1A	96	86.104	ENSEEUG00000009219	PPARGC1A	99	88.571	Erinaceus_europaeus
ENSCAPG00000005150	PPARGC1A	64	75.728	ENSELUG00000017027	ppargc1a	89	82.927	Esox_lucius
ENSCAPG00000005150	PPARGC1A	96	91.157	ENSFCAG00000000043	PPARGC1A	97	91.157	Felis_catus
ENSCAPG00000005150	PPARGC1A	96	82.965	ENSFALG00000009211	PPARGC1A	97	82.965	Ficedula_albicollis
ENSCAPG00000005150	PPARGC1A	54	48.921	ENSFALG00000008858	PPARGC1B	53	48.921	Ficedula_albicollis
ENSCAPG00000005150	PPARGC1A	52	51.136	ENSFDAG00000008719	PPARGC1B	50	48.855	Fukomys_damarensis
ENSCAPG00000005150	PPARGC1A	96	92.718	ENSFDAG00000005659	PPARGC1A	97	92.718	Fukomys_damarensis
ENSCAPG00000005150	PPARGC1A	82	74.737	ENSFHEG00000021990	ppargc1a	58	78.049	Fundulus_heteroclitus
ENSCAPG00000005150	PPARGC1A	96	83.485	ENSGALG00000042851	PPARGC1A	98	83.485	Gallus_gallus
ENSCAPG00000005150	PPARGC1A	50	76.316	ENSGAFG00000015514	ppargc1a	67	44.505	Gambusia_affinis
ENSCAPG00000005150	PPARGC1A	55	47.436	ENSGAGG00000012870	PPARGC1B	56	46.795	Gopherus_agassizii
ENSCAPG00000005150	PPARGC1A	96	82.185	ENSGAGG00000007043	PPARGC1A	100	82.115	Gopherus_agassizii
ENSCAPG00000005150	PPARGC1A	96	92.718	ENSGGOG00000009810	PPARGC1A	96	92.718	Gorilla_gorilla
ENSCAPG00000005150	PPARGC1A	79	81.818	ENSHBUG00000005269	ppargc1a	86	85.714	Haplochromis_burtoni
ENSCAPG00000005150	PPARGC1A	52	50.000	ENSHGLG00000005967	PPARGC1B	51	48.889	Heterocephalus_glaber_female
ENSCAPG00000005150	PPARGC1A	96	91.417	ENSHGLG00000007022	PPARGC1A	99	89.597	Heterocephalus_glaber_female
ENSCAPG00000005150	PPARGC1A	96	91.417	ENSHGLG00100000133	PPARGC1A	97	89.597	Heterocephalus_glaber_male
ENSCAPG00000005150	PPARGC1A	87	71.354	ENSHCOG00000014886	ppargc1a	86	79.268	Hippocampus_comes
ENSCAPG00000005150	PPARGC1A	96	91.938	ENSSTOG00000012522	PPARGC1A	97	91.938	Ictidomys_tridecemlineatus
ENSCAPG00000005150	PPARGC1A	52	49.438	ENSJJAG00000018633	Ppargc1b	50	44.444	Jaculus_jaculus
ENSCAPG00000005150	PPARGC1A	91	69.756	ENSLBEG00000019562	ppargc1a	84	81.595	Labrus_bergylta
ENSCAPG00000005150	PPARGC1A	95	69.351	ENSLACG00000014054	PPARGC1A	98	67.922	Latimeria_chalumnae
ENSCAPG00000005150	PPARGC1A	88	36.269	ENSLACG00000011232	PPARGC1B	51	48.322	Latimeria_chalumnae
ENSCAPG00000005150	PPARGC1A	96	89.987	ENSLAFG00000012981	PPARGC1A	100	88.043	Loxodonta_africana
ENSCAPG00000005150	PPARGC1A	96	92.068	ENSMFAG00000000534	PPARGC1A	96	92.068	Macaca_fascicularis
ENSCAPG00000005150	PPARGC1A	96	92.198	ENSMMUG00000001844	PPARGC1A	96	92.198	Macaca_mulatta
ENSCAPG00000005150	PPARGC1A	96	92.198	ENSMNEG00000028682	PPARGC1A	97	92.198	Macaca_nemestrina
ENSCAPG00000005150	PPARGC1A	96	92.588	ENSMLEG00000034233	PPARGC1A	96	92.588	Mandrillus_leucophaeus
ENSCAPG00000005150	PPARGC1A	51	51.145	ENSMLEG00000040973	PPARGC1B	50	51.145	Mandrillus_leucophaeus
ENSCAPG00000005150	PPARGC1A	91	69.626	ENSMAMG00000005531	ppargc1a	87	83.537	Mastacembelus_armatus
ENSCAPG00000005150	PPARGC1A	82	77.487	ENSMZEG00005001739	ppargc1a	57	81.707	Maylandia_zebra
ENSCAPG00000005150	PPARGC1A	96	83.355	ENSMGAG00000012485	PPARGC1A	97	83.355	Meleagris_gallopavo
ENSCAPG00000005150	PPARGC1A	72	49.635	ENSMAUG00000014191	Ppargc1b	55	49.635	Mesocricetus_auratus
ENSCAPG00000005150	PPARGC1A	96	90.117	ENSMAUG00000011811	Ppargc1a	97	90.117	Mesocricetus_auratus
ENSCAPG00000005150	PPARGC1A	54	51.136	ENSMICG00000002702	PPARGC1B	50	51.145	Microcebus_murinus
ENSCAPG00000005150	PPARGC1A	100	90.286	ENSMICG00000015390	PPARGC1A	96	92.848	Microcebus_murinus
ENSCAPG00000005150	PPARGC1A	67	46.715	ENSMOCG00000014885	Ppargc1b	54	46.715	Microtus_ochrogaster
ENSCAPG00000005150	PPARGC1A	96	89.727	ENSMOCG00000008765	Ppargc1a	97	89.727	Microtus_ochrogaster
ENSCAPG00000005150	PPARGC1A	79	83.030	ENSMMOG00000011847	ppargc1a	93	82.927	Mola_mola
ENSCAPG00000005150	PPARGC1A	96	87.126	ENSMODG00000000549	PPARGC1A	97	87.126	Monodelphis_domestica
ENSCAPG00000005150	PPARGC1A	64	72.308	ENSMALG00000004625	ppargc1a	73	77.439	Monopterus_albus
ENSCAPG00000005150	PPARGC1A	96	89.597	MGP_CAROLIEiJ_G0027213	Ppargc1a	97	89.597	Mus_caroli
ENSCAPG00000005150	PPARGC1A	70	48.092	MGP_CAROLIEiJ_G0022323	Ppargc1b	54	48.092	Mus_caroli
ENSCAPG00000005150	PPARGC1A	96	89.740	ENSMUSG00000029167	Ppargc1a	97	89.740	Mus_musculus
ENSCAPG00000005150	PPARGC1A	51	51.136	ENSMUSG00000033871	Ppargc1b	52	48.092	Mus_musculus
ENSCAPG00000005150	PPARGC1A	52	50.000	MGP_PahariEiJ_G0019053	Ppargc1b	50	46.324	Mus_pahari
ENSCAPG00000005150	PPARGC1A	96	89.467	MGP_PahariEiJ_G0016995	Ppargc1a	97	89.467	Mus_pahari
ENSCAPG00000005150	PPARGC1A	96	89.481	MGP_SPRETEiJ_G0028208	Ppargc1a	97	89.481	Mus_spretus
ENSCAPG00000005150	PPARGC1A	52	51.136	MGP_SPRETEiJ_G0023235	Ppargc1b	54	46.324	Mus_spretus
ENSCAPG00000005150	PPARGC1A	96	90.767	ENSMPUG00000016736	PPARGC1A	97	90.767	Mustela_putorius_furo
ENSCAPG00000005150	PPARGC1A	96	90.767	ENSMLUG00000016307	PPARGC1A	97	90.767	Myotis_lucifugus
ENSCAPG00000005150	PPARGC1A	96	89.857	ENSNGAG00000015090	Ppargc1a	97	89.857	Nannospalax_galili
ENSCAPG00000005150	PPARGC1A	96	91.074	ENSNLEG00000016760	PPARGC1A	100	91.654	Nomascus_leucogenys
ENSCAPG00000005150	PPARGC1A	64	49.618	ENSOPRG00000010017	PPARGC1B	50	49.618	Ochotona_princeps
ENSCAPG00000005150	PPARGC1A	96	89.727	ENSOPRG00000012899	PPARGC1A	97	89.727	Ochotona_princeps
ENSCAPG00000005150	PPARGC1A	96	84.525	ENSOANG00000006680	PPARGC1A	97	84.525	Ornithorhynchus_anatinus
ENSCAPG00000005150	PPARGC1A	65	44.604	ENSOCUG00000013833	PPARGC1B	50	47.328	Oryctolagus_cuniculus
ENSCAPG00000005150	PPARGC1A	96	91.027	ENSOCUG00000014668	PPARGC1A	97	91.027	Oryctolagus_cuniculus
ENSCAPG00000005150	PPARGC1A	83	77.895	ENSORLG00000004788	ppargc1a	58	80.488	Oryzias_latipes
ENSCAPG00000005150	PPARGC1A	83	76.842	ENSORLG00020014690	ppargc1a	58	79.268	Oryzias_latipes_hni
ENSCAPG00000005150	PPARGC1A	83	77.368	ENSORLG00015012206	ppargc1a	85	83.673	Oryzias_latipes_hsok
ENSCAPG00000005150	PPARGC1A	65	77.083	ENSOMEG00000000670	ppargc1a	90	80.488	Oryzias_melastigma
ENSCAPG00000005150	PPARGC1A	96	91.027	ENSOGAG00000014559	PPARGC1A	96	91.027	Otolemur_garnettii
ENSCAPG00000005150	PPARGC1A	96	89.351	ENSOARG00000005581	PPARGC1A	94	89.351	Ovis_aries
ENSCAPG00000005150	PPARGC1A	96	92.588	ENSPPAG00000034694	PPARGC1A	100	91.654	Pan_paniscus
ENSCAPG00000005150	PPARGC1A	96	91.157	ENSPPRG00000001711	PPARGC1A	97	91.157	Panthera_pardus
ENSCAPG00000005150	PPARGC1A	96	91.157	ENSPTIG00000007378	PPARGC1A	97	91.157	Panthera_tigris_altaica
ENSCAPG00000005150	PPARGC1A	96	92.718	ENSPTRG00000015954	PPARGC1A	100	91.654	Pan_troglodytes
ENSCAPG00000005150	PPARGC1A	96	91.429	ENSPANG00000005420	PPARGC1A	96	91.429	Papio_anubis
ENSCAPG00000005150	PPARGC1A	96	83.485	ENSPSIG00000011790	PPARGC1A	97	83.485	Pelodiscus_sinensis
ENSCAPG00000005150	PPARGC1A	67	45.860	ENSPSIG00000008358	PPARGC1B	53	45.860	Pelodiscus_sinensis
ENSCAPG00000005150	PPARGC1A	96	90.130	ENSPEMG00000010892	Ppargc1a	97	90.130	Peromyscus_maniculatus_bairdii
ENSCAPG00000005150	PPARGC1A	68	45.455	ENSPEMG00000018822	Ppargc1b	51	48.175	Peromyscus_maniculatus_bairdii
ENSCAPG00000005150	PPARGC1A	96	85.696	ENSPCIG00000015835	PPARGC1A	97	85.696	Phascolarctos_cinereus
ENSCAPG00000005150	PPARGC1A	58	69.268	ENSPFOG00000001263	ppargc1a	69	41.796	Poecilia_formosa
ENSCAPG00000005150	PPARGC1A	91	69.268	ENSPMEG00000000720	ppargc1a	87	79.268	Poecilia_mexicana
ENSCAPG00000005150	PPARGC1A	82	76.316	ENSPREG00000019171	ppargc1a	68	79.268	Poecilia_reticulata
ENSCAPG00000005150	PPARGC1A	96	92.848	ENSPPYG00000014640	PPARGC1A	96	92.848	Pongo_abelii
ENSCAPG00000005150	PPARGC1A	96	87.906	ENSPCAG00000016308	PPARGC1A	97	87.906	Procavia_capensis
ENSCAPG00000005150	PPARGC1A	52	51.908	ENSPCOG00000024059	PPARGC1B	50	51.908	Propithecus_coquereli
ENSCAPG00000005150	PPARGC1A	96	92.848	ENSPCOG00000022858	PPARGC1A	96	92.848	Propithecus_coquereli
ENSCAPG00000005150	PPARGC1A	96	91.547	ENSPVAG00000004965	PPARGC1A	97	91.547	Pteropus_vampyrus
ENSCAPG00000005150	PPARGC1A	82	77.487	ENSPNYG00000006846	ppargc1a	57	81.707	Pundamilia_nyererei
ENSCAPG00000005150	PPARGC1A	91	68.473	ENSPNAG00000010393	ppargc1a	68	45.875	Pygocentrus_nattereri
ENSCAPG00000005150	PPARGC1A	65	47.059	ENSRNOG00000017503	Ppargc1b	52	47.059	Rattus_norvegicus
ENSCAPG00000005150	PPARGC1A	96	89.987	ENSRNOG00000004473	Ppargc1a	97	89.987	Rattus_norvegicus
ENSCAPG00000005150	PPARGC1A	96	92.588	ENSRBIG00000032333	PPARGC1A	96	92.588	Rhinopithecus_bieti
ENSCAPG00000005150	PPARGC1A	96	92.718	ENSRROG00000010419	PPARGC1A	97	92.718	Rhinopithecus_roxellana
ENSCAPG00000005150	PPARGC1A	96	92.068	ENSSBOG00000006423	PPARGC1A	97	92.068	Saimiri_boliviensis_boliviensis
ENSCAPG00000005150	PPARGC1A	96	87.256	ENSSHAG00000010033	PPARGC1A	97	85.578	Sarcophilus_harrisii
ENSCAPG00000005150	PPARGC1A	89	68.780	ENSSMAG00000011571	ppargc1a	50	82.317	Scophthalmus_maximus
ENSCAPG00000005150	PPARGC1A	64	47.464	ENSSDUG00000007408	ppargc1a	70	47.368	Seriola_dumerili
ENSCAPG00000005150	PPARGC1A	89	69.159	ENSSLDG00000006987	ppargc1a	88	82.927	Seriola_lalandi_dorsalis
ENSCAPG00000005150	PPARGC1A	96	84.395	ENSSARG00000000575	PPARGC1A	97	84.395	Sorex_araneus
ENSCAPG00000005150	PPARGC1A	96	83.745	ENSSPUG00000013556	PPARGC1A	97	83.745	Sphenodon_punctatus
ENSCAPG00000005150	PPARGC1A	64	50.400	ENSSPUG00000019271	PPARGC1B	53	50.400	Sphenodon_punctatus
ENSCAPG00000005150	PPARGC1A	64	79.058	ENSSPAG00000023514	ppargc1a	58	82.927	Stegastes_partitus
ENSCAPG00000005150	PPARGC1A	96	90.247	ENSSSCG00000029275	PPARGC1A	98	90.247	Sus_scrofa
ENSCAPG00000005150	PPARGC1A	96	82.965	ENSTGUG00000009487	PPARGC1A	97	82.965	Taeniopygia_guttata
ENSCAPG00000005150	PPARGC1A	71	84.337	ENSTRUG00000007210	ppargc1a	86	84.146	Takifugu_rubripes
ENSCAPG00000005150	PPARGC1A	96	88.947	ENSTTRG00000005327	PPARGC1A	97	88.947	Tursiops_truncatus
ENSCAPG00000005150	PPARGC1A	64	52.672	ENSTTRG00000008430	PPARGC1B	50	52.672	Tursiops_truncatus
ENSCAPG00000005150	PPARGC1A	92	88.156	ENSUAMG00000020843	PPARGC1A	100	89.717	Ursus_americanus
ENSCAPG00000005150	PPARGC1A	96	91.287	ENSUMAG00000003557	PPARGC1A	98	91.287	Ursus_maritimus
ENSCAPG00000005150	PPARGC1A	90	88.889	ENSVPAG00000003478	PPARGC1A	90	88.889	Vicugna_pacos
ENSCAPG00000005150	PPARGC1A	96	91.417	ENSVVUG00000013365	PPARGC1A	97	91.417	Vulpes_vulpes
ENSCAPG00000005150	PPARGC1A	73	45.833	ENSXETG00000012711	ppargc1b	60	47.742	Xenopus_tropicalis
ENSCAPG00000005150	PPARGC1A	96	69.051	ENSXETG00000020468	ppargc1a	97	69.051	Xenopus_tropicalis
ENSCAPG00000005150	PPARGC1A	82	75.789	ENSXMAG00000007748	ppargc1a	58	79.268	Xiphophorus_maculatus