EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000005161 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 9922 bases
Position: chrAVPZ01000067.1:37277237-37287158
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002309	zf-U1	PF06220.12	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000005690	SNRPC-201	429	-	ENSCAPP00000002309	142 (aa)	-	UPI0000F64AD3

Gene Model

Click here to download ENSCAPG00000005161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000005161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000005161	SNRPC	100	100.000	ENSG00000124562	SNRPC	100	100.000	Homo_sapiens
ENSCAPG00000005161	SNRPC	100	100.000	ENSAMEG00000000963	SNRPC	78	100.000	Ailuropoda_melanoleuca
ENSCAPG00000005161	SNRPC	100	97.183	ENSACAG00000015721	SNRPC	79	97.183	Anolis_carolinensis
ENSCAPG00000005161	SNRPC	100	99.296	ENSANAG00000007843	-	89	99.296	Aotus_nancymaae
ENSCAPG00000005161	SNRPC	100	92.958	ENSANAG00000020588	-	83	92.958	Aotus_nancymaae
ENSCAPG00000005161	SNRPC	100	100.000	ENSANAG00000019696	-	89	100.000	Aotus_nancymaae
ENSCAPG00000005161	SNRPC	100	96.479	ENSANAG00000019157	-	89	96.479	Aotus_nancymaae
ENSCAPG00000005161	SNRPC	89	93.701	ENSANAG00000021026	-	77	93.701	Aotus_nancymaae
ENSCAPG00000005161	SNRPC	100	88.028	ENSANAG00000019726	-	82	88.732	Aotus_nancymaae
ENSCAPG00000005161	SNRPC	100	83.099	ENSAMXG00000032641	snrpc	78	83.099	Astyanax_mexicanus
ENSCAPG00000005161	SNRPC	100	100.000	ENSBTAG00000024549	SNRPC	89	100.000	Bos_taurus
ENSCAPG00000005161	SNRPC	100	100.000	ENSCJAG00000015321	-	89	100.000	Callithrix_jacchus
ENSCAPG00000005161	SNRPC	100	98.592	ENSCJAG00000043055	-	89	98.592	Callithrix_jacchus
ENSCAPG00000005161	SNRPC	100	97.887	ENSCJAG00000041822	-	89	97.887	Callithrix_jacchus
ENSCAPG00000005161	SNRPC	71	100.000	ENSCAFG00000001231	-	80	100.000	Canis_familiaris
ENSCAPG00000005161	SNRPC	100	97.203	ENSCAFG00000028988	-	89	97.203	Canis_familiaris
ENSCAPG00000005161	SNRPC	100	76.761	ENSCAFG00000025525	-	89	76.761	Canis_familiaris
ENSCAPG00000005161	SNRPC	100	95.070	ENSCAFG00000031775	-	89	95.070	Canis_familiaris
ENSCAPG00000005161	SNRPC	100	100.000	ENSCAFG00020005945	-	89	100.000	Canis_lupus_dingo
ENSCAPG00000005161	SNRPC	100	90.141	ENSCAFG00020009944	-	82	90.141	Canis_lupus_dingo
ENSCAPG00000005161	SNRPC	100	96.479	ENSCAFG00020005758	-	89	96.479	Canis_lupus_dingo
ENSCAPG00000005161	SNRPC	100	83.230	ENSCAFG00020026577	-	90	83.230	Canis_lupus_dingo
ENSCAPG00000005161	SNRPC	100	95.070	ENSCAFG00020017383	-	89	95.070	Canis_lupus_dingo
ENSCAPG00000005161	SNRPC	100	70.423	ENSCHIG00000005039	-	89	69.014	Capra_hircus
ENSCAPG00000005161	SNRPC	100	99.296	ENSCHIG00000012087	-	89	99.296	Capra_hircus
ENSCAPG00000005161	SNRPC	100	100.000	ENSTSYG00000011216	-	89	100.000	Carlito_syrichta
ENSCAPG00000005161	SNRPC	99	89.286	ENSTSYG00000029745	-	53	94.340	Carlito_syrichta
ENSCAPG00000005161	SNRPC	100	81.690	ENSTSYG00000025721	-	88	73.944	Carlito_syrichta
ENSCAPG00000005161	SNRPC	100	100.000	ENSCPOG00000008563	SNRPC	89	100.000	Cavia_porcellus
ENSCAPG00000005161	SNRPC	100	92.254	ENSCCAG00000022751	-	87	92.254	Cebus_capucinus
ENSCAPG00000005161	SNRPC	100	66.901	ENSCCAG00000028293	-	50	89.231	Cebus_capucinus
ENSCAPG00000005161	SNRPC	96	78.723	ENSCCAG00000022209	-	92	78.723	Cebus_capucinus
ENSCAPG00000005161	SNRPC	99	80.714	ENSCCAG00000026624	-	58	74.286	Cebus_capucinus
ENSCAPG00000005161	SNRPC	100	94.366	ENSCCAG00000036059	-	79	94.366	Cebus_capucinus
ENSCAPG00000005161	SNRPC	100	100.000	ENSCATG00000035787	SNRPC	89	100.000	Cercocebus_atys
ENSCAPG00000005161	SNRPC	100	100.000	ENSCLAG00000016920	SNRPC	89	100.000	Chinchilla_lanigera
ENSCAPG00000005161	SNRPC	99	80.142	ENSCLAG00000010242	-	65	82.075	Chinchilla_lanigera
ENSCAPG00000005161	SNRPC	100	83.851	ENSCSAG00000009821	SNRPC	90	83.851	Chlorocebus_sabaeus
ENSCAPG00000005161	SNRPC	100	80.986	ENSCHOG00000011439	SNRPC	79	80.986	Choloepus_hoffmanni
ENSCAPG00000005161	SNRPC	100	97.183	ENSCPBG00000027142	SNRPC	89	97.183	Chrysemys_picta_bellii
ENSCAPG00000005161	SNRPC	100	100.000	ENSCANG00000028035	SNRPC	89	100.000	Colobus_angolensis_palliatus
ENSCAPG00000005161	SNRPC	100	86.620	ENSCGRG00001021483	-	88	84.507	Cricetulus_griseus_chok1gshd
ENSCAPG00000005161	SNRPC	100	99.296	ENSCGRG00001009011	-	89	99.296	Cricetulus_griseus_chok1gshd
ENSCAPG00000005161	SNRPC	100	99.296	ENSCGRG00000005005	Snrpc	89	99.296	Cricetulus_griseus_crigri
ENSCAPG00000005161	SNRPC	100	83.099	ENSDARG00000009871	snrpc	89	83.099	Danio_rerio
ENSCAPG00000005161	SNRPC	72	99.020	ENSDNOG00000042403	-	81	99.020	Dasypus_novemcinctus
ENSCAPG00000005161	SNRPC	100	98.592	ENSDNOG00000034699	-	89	98.592	Dasypus_novemcinctus
ENSCAPG00000005161	SNRPC	100	80.986	ENSDORG00000005955	Snrpc	59	78.873	Dipodomys_ordii
ENSCAPG00000005161	SNRPC	98	92.086	ENSETEG00000011265	-	89	92.086	Echinops_telfairi
ENSCAPG00000005161	SNRPC	98	95.683	ENSETEG00000008268	-	89	95.683	Echinops_telfairi
ENSCAPG00000005161	SNRPC	100	100.000	ENSEASG00005021007	SNRPC	89	100.000	Equus_asinus_asinus
ENSCAPG00000005161	SNRPC	100	100.000	ENSECAG00000026848	SNRPC	89	100.000	Equus_caballus
ENSCAPG00000005161	SNRPC	100	78.169	ENSEEUG00000014633	SNRPC	81	78.169	Erinaceus_europaeus
ENSCAPG00000005161	SNRPC	100	100.000	ENSFCAG00000044077	-	89	100.000	Felis_catus
ENSCAPG00000005161	SNRPC	100	92.254	ENSFCAG00000031775	-	78	92.254	Felis_catus
ENSCAPG00000005161	SNRPC	100	98.592	ENSFALG00000003756	SNRPC	89	98.592	Ficedula_albicollis
ENSCAPG00000005161	SNRPC	100	100.000	ENSFDAG00000018111	SNRPC	89	100.000	Fukomys_damarensis
ENSCAPG00000005161	SNRPC	100	96.503	ENSGALG00000002773	SNRPC	89	96.503	Gallus_gallus
ENSCAPG00000005161	SNRPC	100	97.183	ENSGAGG00000003063	SNRPC	89	97.183	Gopherus_agassizii
ENSCAPG00000005161	SNRPC	100	100.000	ENSGGOG00000012499	SNRPC	89	100.000	Gorilla_gorilla
ENSCAPG00000005161	SNRPC	100	100.000	ENSHGLG00000013981	SNRPC	90	100.000	Heterocephalus_glaber_female
ENSCAPG00000005161	SNRPC	100	79.577	ENSHGLG00000017741	-	89	76.761	Heterocephalus_glaber_female
ENSCAPG00000005161	SNRPC	78	74.775	ENSHGLG00000005871	-	87	75.177	Heterocephalus_glaber_female
ENSCAPG00000005161	SNRPC	100	94.366	ENSHGLG00100017764	-	89	94.366	Heterocephalus_glaber_male
ENSCAPG00000005161	SNRPC	100	79.577	ENSHGLG00100010786	-	89	76.761	Heterocephalus_glaber_male
ENSCAPG00000005161	SNRPC	100	100.000	ENSHGLG00100009478	SNRPC	90	100.000	Heterocephalus_glaber_male
ENSCAPG00000005161	SNRPC	100	83.803	ENSIPUG00000024851	snrpc	89	83.803	Ictalurus_punctatus
ENSCAPG00000005161	SNRPC	100	100.000	ENSSTOG00000013786	SNRPC	89	100.000	Ictidomys_tridecemlineatus
ENSCAPG00000005161	SNRPC	100	99.296	ENSJJAG00000021741	Snrpc	89	99.296	Jaculus_jaculus
ENSCAPG00000005161	SNRPC	100	88.811	ENSLACG00000013753	SNRPC	79	91.608	Latimeria_chalumnae
ENSCAPG00000005161	SNRPC	100	100.000	ENSLAFG00000013534	SNRPC	89	100.000	Loxodonta_africana
ENSCAPG00000005161	SNRPC	100	100.000	ENSMFAG00000031764	-	89	100.000	Macaca_fascicularis
ENSCAPG00000005161	SNRPC	100	99.296	ENSMFAG00000030525	-	89	99.296	Macaca_fascicularis
ENSCAPG00000005161	SNRPC	100	90.141	ENSMMUG00000045425	-	89	90.141	Macaca_mulatta
ENSCAPG00000005161	SNRPC	100	98.592	ENSMMUG00000039415	-	89	98.592	Macaca_mulatta
ENSCAPG00000005161	SNRPC	100	100.000	ENSMMUG00000000869	-	87	100.000	Macaca_mulatta
ENSCAPG00000005161	SNRPC	100	100.000	ENSMNEG00000032731	SNRPC	89	100.000	Macaca_nemestrina
ENSCAPG00000005161	SNRPC	100	90.845	ENSMLEG00000040224	-	82	90.845	Mandrillus_leucophaeus
ENSCAPG00000005161	SNRPC	100	100.000	ENSMLEG00000033916	-	89	100.000	Mandrillus_leucophaeus
ENSCAPG00000005161	SNRPC	100	96.479	ENSMGAG00000006054	SNRPC	89	96.479	Meleagris_gallopavo
ENSCAPG00000005161	SNRPC	100	99.296	ENSMICG00000007339	-	89	99.296	Microcebus_murinus
ENSCAPG00000005161	SNRPC	100	85.915	ENSMICG00000036552	-	78	80.282	Microcebus_murinus
ENSCAPG00000005161	SNRPC	100	99.296	ENSMICG00000032183	-	89	99.296	Microcebus_murinus
ENSCAPG00000005161	SNRPC	100	86.620	ENSMICG00000009130	-	88	87.324	Microcebus_murinus
ENSCAPG00000005161	SNRPC	100	99.296	ENSMOCG00000017609	Snrpc	89	99.296	Microtus_ochrogaster
ENSCAPG00000005161	SNRPC	100	98.592	ENSMODG00000013904	-	89	98.592	Monodelphis_domestica
ENSCAPG00000005161	SNRPC	100	99.296	MGP_CAROLIEiJ_G0021308	Snrpc	89	99.296	Mus_caroli
ENSCAPG00000005161	SNRPC	100	99.296	ENSMUSG00000024217	Snrpc	90	99.296	Mus_musculus
ENSCAPG00000005161	SNRPC	71	99.010	MGP_SPRETEiJ_G0022221	-	84	99.010	Mus_spretus
ENSCAPG00000005161	SNRPC	100	100.000	ENSMPUG00000003210	SNRPC	89	100.000	Mustela_putorius_furo
ENSCAPG00000005161	SNRPC	100	100.000	ENSMLUG00000002488	SNRPC	89	100.000	Myotis_lucifugus
ENSCAPG00000005161	SNRPC	100	99.296	ENSNGAG00000019686	Snrpc	89	99.296	Nannospalax_galili
ENSCAPG00000005161	SNRPC	100	100.000	ENSNLEG00000034810	SNRPC	89	100.000	Nomascus_leucogenys
ENSCAPG00000005161	SNRPC	100	99.296	ENSMEUG00000009300	SNRPC	100	99.296	Notamacropus_eugenii
ENSCAPG00000005161	SNRPC	100	99.296	ENSODEG00000020201	-	89	99.296	Octodon_degus
ENSCAPG00000005161	SNRPC	81	93.913	ENSODEG00000006008	-	83	93.913	Octodon_degus
ENSCAPG00000005161	SNRPC	100	98.592	ENSODEG00000019633	-	89	98.592	Octodon_degus
ENSCAPG00000005161	SNRPC	100	100.000	ENSODEG00000020370	-	89	100.000	Octodon_degus
ENSCAPG00000005161	SNRPC	100	100.000	ENSODEG00000017080	-	89	100.000	Octodon_degus
ENSCAPG00000005161	SNRPC	100	100.000	ENSODEG00000018985	-	89	100.000	Octodon_degus
ENSCAPG00000005161	SNRPC	100	96.575	ENSOANG00000003405	SNRPC	99	96.575	Ornithorhynchus_anatinus
ENSCAPG00000005161	SNRPC	100	100.000	ENSOCUG00000026668	-	89	100.000	Oryctolagus_cuniculus
ENSCAPG00000005161	SNRPC	100	98.592	ENSOCUG00000026430	-	88	98.592	Oryctolagus_cuniculus
ENSCAPG00000005161	SNRPC	100	97.183	ENSOCUG00000023292	-	89	97.183	Oryctolagus_cuniculus
ENSCAPG00000005161	SNRPC	62	78.409	ENSORLG00020012607	SNRPC	53	78.409	Oryzias_latipes_hni
ENSCAPG00000005161	SNRPC	62	78.409	ENSOMEG00000012014	snrpc	76	76.761	Oryzias_melastigma
ENSCAPG00000005161	SNRPC	100	98.592	ENSOGAG00000026269	-	89	98.592	Otolemur_garnettii
ENSCAPG00000005161	SNRPC	100	100.000	ENSOGAG00000008755	-	80	100.000	Otolemur_garnettii
ENSCAPG00000005161	SNRPC	97	83.333	ENSOGAG00000028405	-	89	80.435	Otolemur_garnettii
ENSCAPG00000005161	SNRPC	100	100.000	ENSOARG00000010823	SNRPC	89	100.000	Ovis_aries
ENSCAPG00000005161	SNRPC	100	100.000	ENSPPAG00000043871	SNRPC	89	100.000	Pan_paniscus
ENSCAPG00000005161	SNRPC	100	100.000	ENSPPRG00000008647	-	89	100.000	Panthera_pardus
ENSCAPG00000005161	SNRPC	100	100.000	ENSPTIG00000021867	-	89	100.000	Panthera_tigris_altaica
ENSCAPG00000005161	SNRPC	100	100.000	ENSPTRG00000018070	SNRPC	89	100.000	Pan_troglodytes
ENSCAPG00000005161	SNRPC	100	100.000	ENSPANG00000022802	-	89	100.000	Papio_anubis
ENSCAPG00000005161	SNRPC	100	88.732	ENSPANG00000018228	-	84	88.732	Papio_anubis
ENSCAPG00000005161	SNRPC	62	85.227	ENSPKIG00000003136	snrpc	57	85.227	Paramormyrops_kingsleyae
ENSCAPG00000005161	SNRPC	100	79.720	ENSPKIG00000001671	SNRPC	90	77.465	Paramormyrops_kingsleyae
ENSCAPG00000005161	SNRPC	100	96.479	ENSPSIG00000004876	SNRPC	70	96.479	Pelodiscus_sinensis
ENSCAPG00000005161	SNRPC	100	85.915	ENSPEMG00000002763	-	89	82.394	Peromyscus_maniculatus_bairdii
ENSCAPG00000005161	SNRPC	100	99.296	ENSPEMG00000010773	Snrpc	89	99.296	Peromyscus_maniculatus_bairdii
ENSCAPG00000005161	SNRPC	100	100.000	ENSPCAG00000016885	SNRPC	81	100.000	Procavia_capensis
ENSCAPG00000005161	SNRPC	100	100.000	ENSPCOG00000004904	SNRPC	89	100.000	Propithecus_coquereli
ENSCAPG00000005161	SNRPC	100	99.296	ENSPVAG00000015597	SNRPC	78	99.296	Pteropus_vampyrus
ENSCAPG00000005161	SNRPC	100	77.465	ENSPNAG00000012799	snrpc	89	80.282	Pygocentrus_nattereri
ENSCAPG00000005161	SNRPC	100	99.296	ENSRNOG00000000493	Snrpc	89	99.296	Rattus_norvegicus
ENSCAPG00000005161	SNRPC	100	99.296	ENSRBIG00000014819	-	89	99.296	Rhinopithecus_bieti
ENSCAPG00000005161	SNRPC	100	100.000	ENSRBIG00000037567	-	89	100.000	Rhinopithecus_bieti
ENSCAPG00000005161	SNRPC	100	90.141	ENSRBIG00000036353	-	74	90.141	Rhinopithecus_bieti
ENSCAPG00000005161	SNRPC	100	99.296	ENSRBIG00000022998	-	89	99.296	Rhinopithecus_bieti
ENSCAPG00000005161	SNRPC	100	100.000	ENSRROG00000041300	SNRPC	89	100.000	Rhinopithecus_roxellana
ENSCAPG00000005161	SNRPC	98	81.295	ENSSBOG00000023189	-	81	81.295	Saimiri_boliviensis_boliviensis
ENSCAPG00000005161	SNRPC	100	80.986	ENSSBOG00000032882	-	84	80.986	Saimiri_boliviensis_boliviensis
ENSCAPG00000005161	SNRPC	94	82.090	ENSSBOG00000032361	-	53	79.747	Saimiri_boliviensis_boliviensis
ENSCAPG00000005161	SNRPC	100	100.000	ENSSBOG00000031528	-	89	100.000	Saimiri_boliviensis_boliviensis
ENSCAPG00000005161	SNRPC	100	99.296	ENSSHAG00000000945	-	79	99.296	Sarcophilus_harrisii
ENSCAPG00000005161	SNRPC	100	78.873	ENSSFOG00015019150	snrpc	89	78.873	Scleropages_formosus
ENSCAPG00000005161	SNRPC	62	84.091	ENSSFOG00015022422	snrpc	68	85.849	Scleropages_formosus
ENSCAPG00000005161	SNRPC	100	74.648	ENSSARG00000008970	SNRPC	79	74.648	Sorex_araneus
ENSCAPG00000005161	SNRPC	100	97.887	ENSSPUG00000002502	SNRPC	89	97.887	Sphenodon_punctatus
ENSCAPG00000005161	SNRPC	100	100.000	ENSSSCG00000001531	SNRPC	89	100.000	Sus_scrofa
ENSCAPG00000005161	SNRPC	100	98.592	ENSTGUG00000001773	SNRPC	89	98.592	Taeniopygia_guttata
ENSCAPG00000005161	SNRPC	98	71.942	ENSTBEG00000015356	-	56	92.405	Tupaia_belangeri
ENSCAPG00000005161	SNRPC	98	92.806	ENSTBEG00000013022	-	89	92.806	Tupaia_belangeri
ENSCAPG00000005161	SNRPC	100	100.000	ENSTTRG00000007827	SNRPC	78	100.000	Tursiops_truncatus
ENSCAPG00000005161	SNRPC	71	100.000	ENSUAMG00000014125	SNRPC	68	100.000	Ursus_americanus
ENSCAPG00000005161	SNRPC	100	88.199	ENSUMAG00000010869	SNRPC	90	88.199	Ursus_maritimus
ENSCAPG00000005161	SNRPC	100	74.648	ENSVPAG00000003106	SNRPC	79	74.648	Vicugna_pacos
ENSCAPG00000005161	SNRPC	100	98.592	ENSVVUG00000021947	-	89	98.592	Vulpes_vulpes
ENSCAPG00000005161	SNRPC	100	94.366	ENSVVUG00000010467	-	79	94.366	Vulpes_vulpes
ENSCAPG00000005161	SNRPC	100	88.732	ENSXETG00000024721	snrpc	89	88.732	Xenopus_tropicalis