EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000005358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 3969 bases
Position: chrAVPZ01000112.1:22387881-22391849
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002399	zf-CCHC	PF00098.23	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000005890	-	327	-	ENSCAPP00000002399	108 (aa)	-	UPI000BAD3740

Gene Model

Click here to download ENSCAPG00000005358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000005358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000005358	-	98	64.844	ENSAPLG00000005968	ZCCHC9	100	58.416	Anas_platyrhynchos
ENSCAPG00000005358	-	100	63.359	ENSACAG00000010965	ZCCHC9	50	63.359	Anolis_carolinensis
ENSCAPG00000005358	-	97	65.625	ENSANAG00000022269	-	51	65.625	Aotus_nancymaae
ENSCAPG00000005358	-	100	71.756	ENSTSYG00000034641	-	58	71.756	Carlito_syrichta
ENSCAPG00000005358	-	100	100.000	ENSCPOG00000003947	ZCCHC9	100	100.000	Cavia_porcellus
ENSCAPG00000005358	-	100	91.667	ENSCLAG00000005289	ZCCHC9	100	91.667	Chinchilla_lanigera
ENSCAPG00000005358	-	100	43.165	ENSCING00000008173	-	62	43.165	Ciona_intestinalis
ENSCAPG00000005358	-	100	87.037	ENSCGRG00000016428	Zcchc9	100	87.037	Cricetulus_griseus_crigri
ENSCAPG00000005358	-	100	88.889	ENSDORG00000001300	Zcchc9	100	88.889	Dipodomys_ordii
ENSCAPG00000005358	-	64	63.768	ENSEBUG00000015943	zcchc9	57	44.030	Eptatretus_burgeri
ENSCAPG00000005358	-	100	71.756	ENSEEUG00000010726	-	92	71.756	Erinaceus_europaeus
ENSCAPG00000005358	-	100	89.815	ENSFDAG00000000163	-	100	89.815	Fukomys_damarensis
ENSCAPG00000005358	-	100	65.741	ENSGMOG00000016323	zcchc9	75	65.741	Gadus_morhua
ENSCAPG00000005358	-	100	75.000	ENSGALG00000015603	ZCCHC9	50	75.000	Gallus_gallus
ENSCAPG00000005358	-	100	55.725	ENSHBUG00000007612	zcchc9	82	55.725	Haplochromis_burtoni
ENSCAPG00000005358	-	100	91.667	ENSHGLG00000005793	-	100	91.667	Heterocephalus_glaber_female
ENSCAPG00000005358	-	100	91.667	ENSHGLG00100001090	-	100	91.667	Heterocephalus_glaber_male
ENSCAPG00000005358	-	100	88.889	ENSSTOG00000001407	ZCCHC9	100	88.889	Ictidomys_tridecemlineatus
ENSCAPG00000005358	-	100	88.889	ENSJJAG00000015479	Zcchc9	100	88.889	Jaculus_jaculus
ENSCAPG00000005358	-	100	56.489	ENSLOCG00000005331	zcchc9	51	56.489	Lepisosteus_oculatus
ENSCAPG00000005358	-	100	80.556	ENSMAUG00000022026	Zcchc9	100	80.556	Mesocricetus_auratus
ENSCAPG00000005358	-	100	87.037	ENSMOCG00000012433	Zcchc9	100	87.037	Microtus_ochrogaster
ENSCAPG00000005358	-	72	57.426	ENSMODG00000004970	-	100	57.426	Monodelphis_domestica
ENSCAPG00000005358	-	100	67.939	ENSMODG00000020261	-	50	67.939	Monodelphis_domestica
ENSCAPG00000005358	-	100	84.259	MGP_CAROLIEiJ_G0018764	Zcchc9	100	84.259	Mus_caroli
ENSCAPG00000005358	-	100	82.407	ENSMUSG00000021621	Zcchc9	100	82.407	Mus_musculus
ENSCAPG00000005358	-	100	83.333	MGP_PahariEiJ_G0015843	Zcchc9	100	83.333	Mus_pahari
ENSCAPG00000005358	-	100	81.481	MGP_SPRETEiJ_G0019648	Zcchc9	100	81.481	Mus_spretus
ENSCAPG00000005358	-	100	92.593	ENSNGAG00000017736	Zcchc9	100	92.593	Nannospalax_galili
ENSCAPG00000005358	-	100	55.725	ENSNBRG00000005258	zcchc9	54	77.612	Neolamprologus_brichardi
ENSCAPG00000005358	-	100	89.815	ENSODEG00000004349	-	100	89.815	Octodon_degus
ENSCAPG00000005358	-	100	73.282	ENSOCUG00000011215	ZCCHC9	50	73.282	Oryctolagus_cuniculus
ENSCAPG00000005358	-	100	53.435	ENSORLG00000020135	zcchc9	50	53.435	Oryzias_latipes
ENSCAPG00000005358	-	100	52.672	ENSORLG00020018090	zcchc9	50	52.672	Oryzias_latipes_hni
ENSCAPG00000005358	-	100	53.435	ENSORLG00015005137	zcchc9	50	53.435	Oryzias_latipes_hsok
ENSCAPG00000005358	-	100	52.672	ENSOMEG00000004423	zcchc9	50	52.672	Oryzias_melastigma
ENSCAPG00000005358	-	100	56.489	ENSPKIG00000006659	zcchc9	50	56.489	Paramormyrops_kingsleyae
ENSCAPG00000005358	-	100	52.672	ENSPMGG00000000044	zcchc9	52	52.672	Periophthalmus_magnuspinnatus
ENSCAPG00000005358	-	100	87.963	ENSPEMG00000016614	Zcchc9	100	87.963	Peromyscus_maniculatus_bairdii
ENSCAPG00000005358	-	100	73.282	ENSPCOG00000018504	ZCCHC9	92	73.282	Propithecus_coquereli
ENSCAPG00000005358	-	100	61.940	ENSSHAG00000014504	ZCCHC9	51	61.940	Sarcophilus_harrisii
ENSCAPG00000005358	-	100	56.391	ENSTGUG00000006994	ZCCHC9	77	56.391	Taeniopygia_guttata
ENSCAPG00000005358	-	100	63.077	ENSXETG00000027804	zcchc9	53	63.077	Xenopus_tropicalis
ENSCAPG00000005358	-	100	52.672	ENSXMAG00000024144	zcchc9	50	52.672	Xiphophorus_maculatus