EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000005386 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 35455 bases
Position: chrAVPZ01000023.1:11215611-11251065
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002433	Suf	PF05843.14	1.1e-13	1	1
ENSCAPP00000002433	S1	PF00575.23	5.2e-38	1	2
ENSCAPP00000002433	S1	PF00575.23	5.2e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000005950	PDCD11-201	4644	-	ENSCAPP00000002433	1547 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000005386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000005386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000005386	PDCD11	99	72.898	ENSG00000148843	PDCD11	91	72.898	Homo_sapiens
ENSCAPG00000005386	PDCD11	99	39.088	ENSAPOG00000015629	pdcd11	91	39.283	Acanthochromis_polyacanthus
ENSCAPG00000005386	PDCD11	99	70.721	ENSAMEG00000017935	PDCD11	91	70.978	Ailuropoda_melanoleuca
ENSCAPG00000005386	PDCD11	99	38.697	ENSAOCG00000015287	pdcd11	92	39.023	Amphiprion_ocellaris
ENSCAPG00000005386	PDCD11	99	39.974	ENSATEG00000021043	pdcd11	91	40.078	Anabas_testudineus
ENSCAPG00000005386	PDCD11	99	48.803	ENSAPLG00000010301	PDCD11	92	48.837	Anas_platyrhynchos
ENSCAPG00000005386	PDCD11	99	50.276	ENSACAG00000004796	PDCD11	96	50.276	Anolis_carolinensis
ENSCAPG00000005386	PDCD11	99	72.940	ENSANAG00000034576	PDCD11	92	72.940	Aotus_nancymaae
ENSCAPG00000005386	PDCD11	88	60.767	ENSACLG00000018236	pdcd11	90	60.767	Astatotilapia_calliptera
ENSCAPG00000005386	PDCD11	92	45.771	ENSAMXG00000005458	pdcd11	97	45.274	Astyanax_mexicanus
ENSCAPG00000005386	PDCD11	100	67.103	ENSBTAG00000009715	PDCD11	93	67.249	Bos_taurus
ENSCAPG00000005386	PDCD11	99	72.438	ENSCJAG00000018257	PDCD11	92	72.438	Callithrix_jacchus
ENSCAPG00000005386	PDCD11	99	71.493	ENSCAFG00000010411	PDCD11	91	71.686	Canis_familiaris
ENSCAPG00000005386	PDCD11	99	72.237	ENSCAFG00020010369	PDCD11	91	71.622	Canis_lupus_dingo
ENSCAPG00000005386	PDCD11	99	76.087	ENSCHIG00000025218	PDCD11	91	76.087	Capra_hircus
ENSCAPG00000005386	PDCD11	100	66.289	ENSTSYG00000033423	PDCD11	94	67.885	Carlito_syrichta
ENSCAPG00000005386	PDCD11	99	87.435	ENSCPOG00000010957	PDCD11	94	87.435	Cavia_porcellus
ENSCAPG00000005386	PDCD11	99	72.374	ENSCCAG00000018950	PDCD11	91	72.374	Cebus_capucinus
ENSCAPG00000005386	PDCD11	99	72.997	ENSCATG00000044331	PDCD11	91	72.997	Cercocebus_atys
ENSCAPG00000005386	PDCD11	99	75.665	ENSCLAG00000001029	PDCD11	91	75.665	Chinchilla_lanigera
ENSCAPG00000005386	PDCD11	99	72.962	ENSCSAG00000005346	PDCD11	91	72.962	Chlorocebus_sabaeus
ENSCAPG00000005386	PDCD11	76	93.798	ENSCHOG00000004796	PDCD11	77	93.798	Choloepus_hoffmanni
ENSCAPG00000005386	PDCD11	99	52.641	ENSCPBG00000024487	PDCD11	95	72.414	Chrysemys_picta_bellii
ENSCAPG00000005386	PDCD11	89	44.106	ENSCING00000002715	-	74	44.106	Ciona_intestinalis
ENSCAPG00000005386	PDCD11	99	73.174	ENSCANG00000043300	PDCD11	91	73.157	Colobus_angolensis_palliatus
ENSCAPG00000005386	PDCD11	99	70.233	ENSCGRG00001006458	Pdcd11	96	69.619	Cricetulus_griseus_chok1gshd
ENSCAPG00000005386	PDCD11	99	70.123	ENSCGRG00000003583	Pdcd11	91	70.123	Cricetulus_griseus_crigri
ENSCAPG00000005386	PDCD11	96	36.336	ENSCSEG00000010739	pdcd11	95	36.397	Cynoglossus_semilaevis
ENSCAPG00000005386	PDCD11	87	64.201	ENSCVAG00000018903	pdcd11	95	47.302	Cyprinodon_variegatus
ENSCAPG00000005386	PDCD11	99	40.055	ENSDARG00000052480	pdcd11	94	40.191	Danio_rerio
ENSCAPG00000005386	PDCD11	99	69.330	ENSDNOG00000013838	PDCD11	91	73.913	Dasypus_novemcinctus
ENSCAPG00000005386	PDCD11	99	79.891	ENSDORG00000010420	Pdcd11	91	79.891	Dipodomys_ordii
ENSCAPG00000005386	PDCD11	91	91.071	ENSETEG00000000813	PDCD11	88	91.071	Echinops_telfairi
ENSCAPG00000005386	PDCD11	99	71.286	ENSEASG00005015159	PDCD11	97	71.286	Equus_asinus_asinus
ENSCAPG00000005386	PDCD11	100	70.518	ENSECAG00000020507	PDCD11	93	70.518	Equus_caballus
ENSCAPG00000005386	PDCD11	96	94.643	ENSEEUG00000009245	PDCD11	87	94.643	Erinaceus_europaeus
ENSCAPG00000005386	PDCD11	99	40.039	ENSELUG00000004211	pdcd11	90	40.586	Esox_lucius
ENSCAPG00000005386	PDCD11	99	71.373	ENSFCAG00000002384	PDCD11	91	71.180	Felis_catus
ENSCAPG00000005386	PDCD11	99	49.642	ENSFALG00000008775	PDCD11	91	49.707	Ficedula_albicollis
ENSCAPG00000005386	PDCD11	99	77.487	ENSFDAG00000009532	PDCD11	91	76.963	Fukomys_damarensis
ENSCAPG00000005386	PDCD11	99	66.777	ENSFHEG00000022997	pdcd11	87	66.777	Fundulus_heteroclitus
ENSCAPG00000005386	PDCD11	91	42.409	ENSGMOG00000004186	pdcd11	85	42.409	Gadus_morhua
ENSCAPG00000005386	PDCD11	71	50.000	ENSGALG00000008265	PDCD11	89	50.000	Gallus_gallus
ENSCAPG00000005386	PDCD11	98	53.333	ENSGAFG00000012806	pdcd11	97	48.087	Gambusia_affinis
ENSCAPG00000005386	PDCD11	99	39.701	ENSGACG00000018233	pdcd11	96	58.730	Gasterosteus_aculeatus
ENSCAPG00000005386	PDCD11	99	52.198	ENSGAGG00000024314	PDCD11	96	52.198	Gopherus_agassizii
ENSCAPG00000005386	PDCD11	99	72.962	ENSGGOG00000011621	PDCD11	91	72.962	Gorilla_gorilla
ENSCAPG00000005386	PDCD11	99	40.252	ENSHBUG00000020226	pdcd11	92	40.601	Haplochromis_burtoni
ENSCAPG00000005386	PDCD11	99	79.891	ENSHGLG00000001462	PDCD11	91	79.891	Heterocephalus_glaber_female
ENSCAPG00000005386	PDCD11	99	79.891	ENSHGLG00100018779	PDCD11	91	79.891	Heterocephalus_glaber_male
ENSCAPG00000005386	PDCD11	99	38.384	ENSHCOG00000016006	pdcd11	92	37.909	Hippocampus_comes
ENSCAPG00000005386	PDCD11	56	37.143	ENSIPUG00000015102	pdcd11	82	37.143	Ictalurus_punctatus
ENSCAPG00000005386	PDCD11	99	73.990	ENSSTOG00000014553	PDCD11	91	73.990	Ictidomys_tridecemlineatus
ENSCAPG00000005386	PDCD11	99	72.733	ENSJJAG00000015523	Pdcd11	91	73.072	Jaculus_jaculus
ENSCAPG00000005386	PDCD11	99	43.467	ENSLOCG00000011818	pdcd11	91	43.891	Lepisosteus_oculatus
ENSCAPG00000005386	PDCD11	99	70.730	ENSLAFG00000008398	PDCD11	91	70.730	Loxodonta_africana
ENSCAPG00000005386	PDCD11	99	73.045	ENSMFAG00000044058	PDCD11	91	73.027	Macaca_fascicularis
ENSCAPG00000005386	PDCD11	99	73.109	ENSMMUG00000007058	PDCD11	91	73.092	Macaca_mulatta
ENSCAPG00000005386	PDCD11	99	73.174	ENSMNEG00000040726	PDCD11	91	73.157	Macaca_nemestrina
ENSCAPG00000005386	PDCD11	99	72.284	ENSMLEG00000040978	PDCD11	91	72.031	Mandrillus_leucophaeus
ENSCAPG00000005386	PDCD11	99	39.364	ENSMAMG00000009572	pdcd11	91	39.559	Mastacembelus_armatus
ENSCAPG00000005386	PDCD11	98	40.182	ENSMZEG00005008949	pdcd11	89	40.531	Maylandia_zebra
ENSCAPG00000005386	PDCD11	99	50.000	ENSMGAG00000010482	PDCD11	92	50.000	Meleagris_gallopavo
ENSCAPG00000005386	PDCD11	96	67.024	ENSMAUG00000014924	Pdcd11	90	67.560	Mesocricetus_auratus
ENSCAPG00000005386	PDCD11	99	73.087	ENSMICG00000012421	PDCD11	91	73.087	Microcebus_murinus
ENSCAPG00000005386	PDCD11	100	69.571	ENSMOCG00000021792	Pdcd11	92	69.701	Microtus_ochrogaster
ENSCAPG00000005386	PDCD11	97	37.189	ENSMMOG00000007572	pdcd11	86	36.022	Mola_mola
ENSCAPG00000005386	PDCD11	99	55.130	ENSMODG00000011077	PDCD11	91	55.217	Monodelphis_domestica
ENSCAPG00000005386	PDCD11	99	35.165	ENSMALG00000003859	pdcd11	97	34.949	Monopterus_albus
ENSCAPG00000005386	PDCD11	99	68.350	MGP_CAROLIEiJ_G0023050	Pdcd11	91	68.350	Mus_caroli
ENSCAPG00000005386	PDCD11	99	68.633	ENSMUSG00000025047	Pdcd11	91	68.633	Mus_musculus
ENSCAPG00000005386	PDCD11	99	68.282	MGP_PahariEiJ_G0014540	Pdcd11	91	68.282	Mus_pahari
ENSCAPG00000005386	PDCD11	99	68.462	MGP_SPRETEiJ_G0023971	Pdcd11	91	68.592	Mus_spretus
ENSCAPG00000005386	PDCD11	99	70.444	ENSMPUG00000016829	PDCD11	91	70.509	Mustela_putorius_furo
ENSCAPG00000005386	PDCD11	100	71.125	ENSMLUG00000004997	PDCD11	91	71.254	Myotis_lucifugus
ENSCAPG00000005386	PDCD11	99	70.277	ENSNGAG00000018143	Pdcd11	91	70.490	Nannospalax_galili
ENSCAPG00000005386	PDCD11	85	58.252	ENSNBRG00000021596	pdcd11	91	54.674	Neolamprologus_brichardi
ENSCAPG00000005386	PDCD11	99	69.819	ENSNLEG00000026700	PDCD11	92	69.819	Nomascus_leucogenys
ENSCAPG00000005386	PDCD11	74	77.729	ENSMEUG00000013719	-	67	77.729	Notamacropus_eugenii
ENSCAPG00000005386	PDCD11	99	67.539	ENSOPRG00000010593	PDCD11	91	67.539	Ochotona_princeps
ENSCAPG00000005386	PDCD11	99	75.596	ENSODEG00000008079	PDCD11	91	75.596	Octodon_degus
ENSCAPG00000005386	PDCD11	99	39.902	ENSONIG00000018835	pdcd11	92	40.601	Oreochromis_niloticus
ENSCAPG00000005386	PDCD11	99	53.048	ENSOANG00000001636	-	91	53.437	Ornithorhynchus_anatinus
ENSCAPG00000005386	PDCD11	99	72.111	ENSOCUG00000006312	PDCD11	91	72.158	Oryctolagus_cuniculus
ENSCAPG00000005386	PDCD11	99	37.943	ENSORLG00020003642	pdcd11	95	38.208	Oryzias_latipes_hni
ENSCAPG00000005386	PDCD11	99	37.943	ENSORLG00015001618	pdcd11	95	38.067	Oryzias_latipes_hsok
ENSCAPG00000005386	PDCD11	76	42.520	ENSOMEG00000010904	pdcd11	98	42.822	Oryzias_melastigma
ENSCAPG00000005386	PDCD11	100	70.858	ENSOGAG00000008683	PDCD11	92	71.171	Otolemur_garnettii
ENSCAPG00000005386	PDCD11	99	68.689	ENSOARG00000003719	PDCD11	91	77.174	Ovis_aries
ENSCAPG00000005386	PDCD11	100	67.667	ENSPPAG00000024593	PDCD11	96	67.667	Pan_paniscus
ENSCAPG00000005386	PDCD11	99	71.438	ENSPPRG00000015133	PDCD11	91	71.438	Panthera_pardus
ENSCAPG00000005386	PDCD11	99	71.548	ENSPTIG00000011433	PDCD11	91	71.548	Panthera_tigris_altaica
ENSCAPG00000005386	PDCD11	99	72.833	ENSPTRG00000002911	PDCD11	91	72.833	Pan_troglodytes
ENSCAPG00000005386	PDCD11	99	73.027	ENSPANG00000020959	PDCD11	91	73.027	Papio_anubis
ENSCAPG00000005386	PDCD11	98	40.903	ENSPKIG00000000973	pdcd11	89	41.411	Paramormyrops_kingsleyae
ENSCAPG00000005386	PDCD11	73	55.191	ENSPSIG00000005102	PDCD11	85	55.191	Pelodiscus_sinensis
ENSCAPG00000005386	PDCD11	75	47.722	ENSPMGG00000007289	pdcd11	81	48.156	Periophthalmus_magnuspinnatus
ENSCAPG00000005386	PDCD11	99	69.568	ENSPEMG00000010315	Pdcd11	91	69.677	Peromyscus_maniculatus_bairdii
ENSCAPG00000005386	PDCD11	99	38.710	ENSPMAG00000003098	pdcd11	94	38.500	Petromyzon_marinus
ENSCAPG00000005386	PDCD11	100	57.343	ENSPCIG00000001118	PDCD11	96	57.560	Phascolarctos_cinereus
ENSCAPG00000005386	PDCD11	98	40.381	ENSPFOG00000006012	pdcd11	92	40.521	Poecilia_formosa
ENSCAPG00000005386	PDCD11	99	38.673	ENSPLAG00000014494	pdcd11	92	38.803	Poecilia_latipinna
ENSCAPG00000005386	PDCD11	99	36.424	ENSPMEG00000018177	pdcd11	93	36.093	Poecilia_mexicana
ENSCAPG00000005386	PDCD11	98	40.295	ENSPREG00000000475	pdcd11	90	40.295	Poecilia_reticulata
ENSCAPG00000005386	PDCD11	99	72.278	ENSPPYG00000002621	PDCD11	91	72.278	Pongo_abelii
ENSCAPG00000005386	PDCD11	71	77.019	ENSPCAG00000011663	PDCD11	61	77.019	Procavia_capensis
ENSCAPG00000005386	PDCD11	65	81.522	ENSPCOG00000023327	PDCD11	70	81.522	Propithecus_coquereli
ENSCAPG00000005386	PDCD11	99	70.148	ENSPVAG00000004176	PDCD11	91	70.213	Pteropus_vampyrus
ENSCAPG00000005386	PDCD11	99	40.420	ENSPNYG00000003979	pdcd11	92	40.769	Pundamilia_nyererei
ENSCAPG00000005386	PDCD11	99	41.961	ENSPNAG00000017225	pdcd11	96	42.298	Pygocentrus_nattereri
ENSCAPG00000005386	PDCD11	99	68.235	ENSRNOG00000020304	Pdcd11	91	68.235	Rattus_norvegicus
ENSCAPG00000005386	PDCD11	99	72.851	ENSRBIG00000011889	PDCD11	91	72.833	Rhinopithecus_bieti
ENSCAPG00000005386	PDCD11	99	72.851	ENSRROG00000030483	PDCD11	91	72.833	Rhinopithecus_roxellana
ENSCAPG00000005386	PDCD11	66	48.315	YMR229C	-	70	33.059	Saccharomyces_cerevisiae
ENSCAPG00000005386	PDCD11	99	74.430	ENSSBOG00000030308	PDCD11	91	74.614	Saimiri_boliviensis_boliviensis
ENSCAPG00000005386	PDCD11	99	56.611	ENSSHAG00000018258	PDCD11	91	56.722	Sarcophilus_harrisii
ENSCAPG00000005386	PDCD11	99	41.748	ENSSFOG00015003881	pdcd11	91	41.525	Scleropages_formosus
ENSCAPG00000005386	PDCD11	99	38.439	ENSSMAG00000006612	pdcd11	95	38.439	Scophthalmus_maximus
ENSCAPG00000005386	PDCD11	96	46.718	ENSSDUG00000021302	pdcd11	97	47.465	Seriola_dumerili
ENSCAPG00000005386	PDCD11	67	85.714	ENSSARG00000002540	PDCD11	59	85.714	Sorex_araneus
ENSCAPG00000005386	PDCD11	96	36.665	ENSSPAG00000017558	pdcd11	94	36.876	Stegastes_partitus
ENSCAPG00000005386	PDCD11	99	70.554	ENSSSCG00000010599	PDCD11	95	70.554	Sus_scrofa
ENSCAPG00000005386	PDCD11	65	38.798	ENSTRUG00000014291	pdcd11	87	38.830	Takifugu_rubripes
ENSCAPG00000005386	PDCD11	99	38.809	ENSTNIG00000012085	pdcd11	94	38.767	Tetraodon_nigroviridis
ENSCAPG00000005386	PDCD11	98	68.084	ENSTBEG00000001893	PDCD11	90	68.194	Tupaia_belangeri
ENSCAPG00000005386	PDCD11	96	80.851	ENSTTRG00000003356	PDCD11	85	80.851	Tursiops_truncatus
ENSCAPG00000005386	PDCD11	99	70.482	ENSUAMG00000018015	PDCD11	91	70.868	Ursus_americanus
ENSCAPG00000005386	PDCD11	99	69.171	ENSUMAG00000023567	PDCD11	91	69.493	Ursus_maritimus
ENSCAPG00000005386	PDCD11	65	89.286	ENSVPAG00000007405	PDCD11	67	89.286	Vicugna_pacos
ENSCAPG00000005386	PDCD11	99	71.893	ENSVVUG00000004457	PDCD11	91	71.750	Vulpes_vulpes
ENSCAPG00000005386	PDCD11	98	44.709	ENSXETG00000009482	pdcd11	92	45.413	Xenopus_tropicalis
ENSCAPG00000005386	PDCD11	95	43.750	ENSXCOG00000012420	pdcd11	92	34.653	Xiphophorus_couchianus
ENSCAPG00000005386	PDCD11	99	39.611	ENSXMAG00000004638	pdcd11	92	39.548	Xiphophorus_maculatus