EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000005843 (Gene tree)
Gene ID: -
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 38925 bases
Position: chrAVPZ01000023.1:49397039-49435963
Accession: 17103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000002963	Xpo1	PF08389.12	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000006520	TNPO3-201	1728	-	ENSCAPP00000002963	576 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000005843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000005843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000005843	TNPO3	91	97.849	ENSG00000064419	TNPO3	76	97.849	Homo_sapiens
ENSCAPG00000005843	TNPO3	91	86.022	ENSAPOG00000018347	tnpo3	72	86.022	Acanthochromis_polyacanthus
ENSCAPG00000005843	TNPO3	91	97.849	ENSAMEG00000005135	TNPO3	67	97.849	Ailuropoda_melanoleuca
ENSCAPG00000005843	TNPO3	91	84.946	ENSACIG00000005897	tnpo3	74	84.946	Amphilophus_citrinellus
ENSCAPG00000005843	TNPO3	91	86.022	ENSAOCG00000008264	tnpo3	72	86.022	Amphiprion_ocellaris
ENSCAPG00000005843	TNPO3	91	86.022	ENSAPEG00000024300	tnpo3	75	86.022	Amphiprion_percula
ENSCAPG00000005843	TNPO3	91	83.871	ENSATEG00000003197	tnpo3	72	83.871	Anabas_testudineus
ENSCAPG00000005843	TNPO3	82	86.170	ENSAPLG00000005946	TNPO3	75	86.170	Anas_platyrhynchos
ENSCAPG00000005843	TNPO3	76	88.298	ENSACAG00000013470	TNPO3	71	88.298	Anolis_carolinensis
ENSCAPG00000005843	TNPO3	91	97.849	ENSANAG00000037940	TNPO3	70	97.849	Aotus_nancymaae
ENSCAPG00000005843	TNPO3	91	84.946	ENSACLG00000005561	tnpo3	72	84.946	Astatotilapia_calliptera
ENSCAPG00000005843	TNPO3	91	86.022	ENSAMXG00000016236	tnpo3	72	86.022	Astyanax_mexicanus
ENSCAPG00000005843	TNPO3	91	97.849	ENSBTAG00000004992	TNPO3	76	97.849	Bos_taurus
ENSCAPG00000005843	TNPO3	91	97.849	ENSCJAG00000018085	TNPO3	70	97.849	Callithrix_jacchus
ENSCAPG00000005843	TNPO3	91	97.849	ENSCAFG00000001543	TNPO3	70	97.849	Canis_familiaris
ENSCAPG00000005843	TNPO3	91	97.849	ENSCAFG00020022462	TNPO3	71	97.849	Canis_lupus_dingo
ENSCAPG00000005843	TNPO3	91	97.849	ENSCHIG00000011721	TNPO3	70	97.849	Capra_hircus
ENSCAPG00000005843	TNPO3	91	97.849	ENSTSYG00000002989	TNPO3	70	97.849	Carlito_syrichta
ENSCAPG00000005843	TNPO3	91	98.925	ENSCPOG00000039784	TNPO3	70	98.925	Cavia_porcellus
ENSCAPG00000005843	TNPO3	91	97.849	ENSCCAG00000033826	TNPO3	76	97.849	Cebus_capucinus
ENSCAPG00000005843	TNPO3	91	97.849	ENSCATG00000030018	TNPO3	76	97.849	Cercocebus_atys
ENSCAPG00000005843	TNPO3	91	97.849	ENSCLAG00000016298	TNPO3	71	97.849	Chinchilla_lanigera
ENSCAPG00000005843	TNPO3	91	97.849	ENSCSAG00000009966	TNPO3	70	97.849	Chlorocebus_sabaeus
ENSCAPG00000005843	TNPO3	91	92.553	ENSCPBG00000017497	TNPO3	77	92.553	Chrysemys_picta_bellii
ENSCAPG00000005843	TNPO3	91	57.407	ENSCING00000005042	-	66	56.881	Ciona_intestinalis
ENSCAPG00000005843	TNPO3	91	54.630	ENSCSAVG00000008623	-	66	54.630	Ciona_savignyi
ENSCAPG00000005843	TNPO3	91	97.849	ENSCANG00000033070	TNPO3	76	97.849	Colobus_angolensis_palliatus
ENSCAPG00000005843	TNPO3	91	97.849	ENSCGRG00001015925	Tnpo3	70	97.849	Cricetulus_griseus_chok1gshd
ENSCAPG00000005843	TNPO3	91	97.849	ENSCGRG00000010379	Tnpo3	70	97.849	Cricetulus_griseus_crigri
ENSCAPG00000005843	TNPO3	91	82.796	ENSCSEG00000005952	tnpo3	72	82.796	Cynoglossus_semilaevis
ENSCAPG00000005843	TNPO3	91	84.946	ENSCVAG00000020285	tnpo3	72	84.946	Cyprinodon_variegatus
ENSCAPG00000005843	TNPO3	91	84.946	ENSDARG00000045680	tnpo3	73	84.946	Danio_rerio
ENSCAPG00000005843	TNPO3	91	97.849	ENSDNOG00000002556	TNPO3	70	97.849	Dasypus_novemcinctus
ENSCAPG00000005843	TNPO3	52	95.699	ENSDORG00000002433	Tnpo3	60	95.699	Dipodomys_ordii
ENSCAPG00000005843	TNPO3	89	42.991	FBgn0031456	Tnpo-SR	65	42.991	Drosophila_melanogaster
ENSCAPG00000005843	TNPO3	74	99.083	ENSETEG00000002101	TNPO3	50	99.083	Echinops_telfairi
ENSCAPG00000005843	TNPO3	91	75.269	ENSEBUG00000016931	tnpo3	66	75.269	Eptatretus_burgeri
ENSCAPG00000005843	TNPO3	91	97.849	ENSEASG00005008677	TNPO3	70	97.849	Equus_asinus_asinus
ENSCAPG00000005843	TNPO3	91	97.849	ENSECAG00000012815	TNPO3	76	97.849	Equus_caballus
ENSCAPG00000005843	TNPO3	91	97.849	ENSEEUG00000005178	TNPO3	68	97.849	Erinaceus_europaeus
ENSCAPG00000005843	TNPO3	91	87.097	ENSELUG00000012153	tnpo3	72	87.097	Esox_lucius
ENSCAPG00000005843	TNPO3	91	97.849	ENSFCAG00000018186	TNPO3	76	97.849	Felis_catus
ENSCAPG00000005843	TNPO3	91	89.362	ENSFALG00000010667	TNPO3	74	89.362	Ficedula_albicollis
ENSCAPG00000005843	TNPO3	91	96.774	ENSFDAG00000019578	TNPO3	70	96.774	Fukomys_damarensis
ENSCAPG00000005843	TNPO3	91	83.871	ENSFHEG00000012859	tnpo3	72	83.871	Fundulus_heteroclitus
ENSCAPG00000005843	TNPO3	91	84.946	ENSGMOG00000007324	tnpo3	72	84.946	Gadus_morhua
ENSCAPG00000005843	TNPO3	50	92.553	ENSGALG00000039420	TNPO3	61	92.553	Gallus_gallus
ENSCAPG00000005843	TNPO3	91	86.022	ENSGACG00000000699	tnpo3	72	86.022	Gasterosteus_aculeatus
ENSCAPG00000005843	TNPO3	91	92.553	ENSGAGG00000006777	TNPO3	77	92.553	Gopherus_agassizii
ENSCAPG00000005843	TNPO3	91	97.849	ENSGGOG00000008339	TNPO3	76	97.849	Gorilla_gorilla
ENSCAPG00000005843	TNPO3	91	84.946	ENSHBUG00000008351	tnpo3	72	84.946	Haplochromis_burtoni
ENSCAPG00000005843	TNPO3	91	97.849	ENSHGLG00000004463	TNPO3	70	97.849	Heterocephalus_glaber_female
ENSCAPG00000005843	TNPO3	91	97.849	ENSHGLG00100005509	TNPO3	70	97.849	Heterocephalus_glaber_male
ENSCAPG00000005843	TNPO3	91	83.696	ENSHCOG00000007221	tnpo3	72	83.696	Hippocampus_comes
ENSCAPG00000005843	TNPO3	91	88.172	ENSIPUG00000014979	TNPO3	72	88.172	Ictalurus_punctatus
ENSCAPG00000005843	TNPO3	91	97.849	ENSSTOG00000004885	TNPO3	76	97.849	Ictidomys_tridecemlineatus
ENSCAPG00000005843	TNPO3	91	95.699	ENSJJAG00000013530	Tnpo3	72	95.699	Jaculus_jaculus
ENSCAPG00000005843	TNPO3	91	82.796	ENSKMAG00000010497	tnpo3	72	82.796	Kryptolebias_marmoratus
ENSCAPG00000005843	TNPO3	91	71.088	ENSLBEG00000011988	-	73	85.333	Labrus_bergylta
ENSCAPG00000005843	TNPO3	91	84.946	ENSLBEG00000016595	tnpo3	77	84.946	Labrus_bergylta
ENSCAPG00000005843	TNPO3	77	90.566	ENSLACG00000002351	TNPO3	67	90.566	Latimeria_chalumnae
ENSCAPG00000005843	TNPO3	92	89.247	ENSLOCG00000015556	tnpo3	72	89.247	Lepisosteus_oculatus
ENSCAPG00000005843	TNPO3	91	97.849	ENSLAFG00000002738	TNPO3	71	97.849	Loxodonta_africana
ENSCAPG00000005843	TNPO3	91	97.849	ENSMFAG00000032385	TNPO3	76	97.849	Macaca_fascicularis
ENSCAPG00000005843	TNPO3	91	97.849	ENSMMUG00000004311	TNPO3	76	97.849	Macaca_mulatta
ENSCAPG00000005843	TNPO3	91	97.849	ENSMNEG00000045277	TNPO3	76	97.849	Macaca_nemestrina
ENSCAPG00000005843	TNPO3	91	97.849	ENSMLEG00000037881	TNPO3	76	97.849	Mandrillus_leucophaeus
ENSCAPG00000005843	TNPO3	91	84.946	ENSMAMG00000021096	tnpo3	72	84.946	Mastacembelus_armatus
ENSCAPG00000005843	TNPO3	91	84.946	ENSMZEG00005015084	tnpo3	72	84.946	Maylandia_zebra
ENSCAPG00000005843	TNPO3	70	92.553	ENSMGAG00000002839	TNPO3	66	92.553	Meleagris_gallopavo
ENSCAPG00000005843	TNPO3	91	97.849	ENSMAUG00000013463	Tnpo3	70	97.849	Mesocricetus_auratus
ENSCAPG00000005843	TNPO3	91	97.849	ENSMICG00000000140	TNPO3	70	97.849	Microcebus_murinus
ENSCAPG00000005843	TNPO3	91	97.849	ENSMOCG00000013264	Tnpo3	71	97.849	Microtus_ochrogaster
ENSCAPG00000005843	TNPO3	91	83.871	ENSMMOG00000005887	tnpo3	72	83.871	Mola_mola
ENSCAPG00000005843	TNPO3	91	97.849	ENSMODG00000014700	TNPO3	70	97.849	Monodelphis_domestica
ENSCAPG00000005843	TNPO3	91	84.946	ENSMALG00000006675	tnpo3	73	84.946	Monopterus_albus
ENSCAPG00000005843	TNPO3	91	97.849	MGP_CAROLIEiJ_G0028176	Tnpo3	71	97.849	Mus_caroli
ENSCAPG00000005843	TNPO3	91	97.849	ENSMUSG00000012535	Tnpo3	71	97.849	Mus_musculus
ENSCAPG00000005843	TNPO3	91	97.849	MGP_PahariEiJ_G0021934	Tnpo3	71	97.849	Mus_pahari
ENSCAPG00000005843	TNPO3	91	97.849	MGP_SPRETEiJ_G0029176	Tnpo3	71	97.849	Mus_spretus
ENSCAPG00000005843	TNPO3	91	97.849	ENSMPUG00000006021	TNPO3	70	97.849	Mustela_putorius_furo
ENSCAPG00000005843	TNPO3	83	97.849	ENSMLUG00000000947	TNPO3	69	97.849	Myotis_lucifugus
ENSCAPG00000005843	TNPO3	91	97.849	ENSNGAG00000008722	Tnpo3	70	97.849	Nannospalax_galili
ENSCAPG00000005843	TNPO3	91	84.946	ENSNBRG00000019001	tnpo3	75	84.946	Neolamprologus_brichardi
ENSCAPG00000005843	TNPO3	91	97.849	ENSNLEG00000012491	TNPO3	71	97.849	Nomascus_leucogenys
ENSCAPG00000005843	TNPO3	81	96.939	ENSMEUG00000002445	TNPO3	51	96.939	Notamacropus_eugenii
ENSCAPG00000005843	TNPO3	91	96.774	ENSODEG00000012826	TNPO3	72	96.774	Octodon_degus
ENSCAPG00000005843	TNPO3	91	86.022	ENSONIG00000007604	tnpo3	72	86.022	Oreochromis_niloticus
ENSCAPG00000005843	TNPO3	91	97.849	ENSOANG00000011451	TNPO3	71	97.849	Ornithorhynchus_anatinus
ENSCAPG00000005843	TNPO3	91	97.849	ENSOCUG00000010105	TNPO3	67	97.849	Oryctolagus_cuniculus
ENSCAPG00000005843	TNPO3	91	86.022	ENSORLG00000029369	tnpo3	72	86.022	Oryzias_latipes
ENSCAPG00000005843	TNPO3	91	86.022	ENSORLG00020003464	tnpo3	72	86.022	Oryzias_latipes_hni
ENSCAPG00000005843	TNPO3	91	86.022	ENSORLG00015002610	tnpo3	72	86.022	Oryzias_latipes_hsok
ENSCAPG00000005843	TNPO3	91	83.871	ENSOMEG00000021006	tnpo3	72	83.871	Oryzias_melastigma
ENSCAPG00000005843	TNPO3	91	97.849	ENSOGAG00000015340	TNPO3	70	97.849	Otolemur_garnettii
ENSCAPG00000005843	TNPO3	91	97.849	ENSOARG00000004026	TNPO3	70	97.849	Ovis_aries
ENSCAPG00000005843	TNPO3	91	97.849	ENSPPAG00000034975	TNPO3	76	97.849	Pan_paniscus
ENSCAPG00000005843	TNPO3	91	97.849	ENSPPRG00000002050	TNPO3	70	97.849	Panthera_pardus
ENSCAPG00000005843	TNPO3	91	97.849	ENSPTIG00000016167	TNPO3	70	97.849	Panthera_tigris_altaica
ENSCAPG00000005843	TNPO3	91	97.849	ENSPTRG00000019676	TNPO3	76	97.849	Pan_troglodytes
ENSCAPG00000005843	TNPO3	91	97.849	ENSPANG00000022226	TNPO3	71	97.849	Papio_anubis
ENSCAPG00000005843	TNPO3	91	76.344	ENSPKIG00000008628	-	72	76.344	Paramormyrops_kingsleyae
ENSCAPG00000005843	TNPO3	91	79.570	ENSPKIG00000023234	tnpo3	72	79.570	Paramormyrops_kingsleyae
ENSCAPG00000005843	TNPO3	91	97.849	ENSPEMG00000000422	Tnpo3	70	97.849	Peromyscus_maniculatus_bairdii
ENSCAPG00000005843	TNPO3	91	78.495	ENSPMAG00000008621	tnpo3	68	78.495	Petromyzon_marinus
ENSCAPG00000005843	TNPO3	91	96.774	ENSPCIG00000011366	TNPO3	70	96.774	Phascolarctos_cinereus
ENSCAPG00000005843	TNPO3	91	83.871	ENSPFOG00000013592	tnpo3	72	83.871	Poecilia_formosa
ENSCAPG00000005843	TNPO3	91	83.871	ENSPLAG00000010188	tnpo3	72	83.871	Poecilia_latipinna
ENSCAPG00000005843	TNPO3	91	83.871	ENSPMEG00000022731	tnpo3	72	83.871	Poecilia_mexicana
ENSCAPG00000005843	TNPO3	91	97.849	ENSPPYG00000017990	TNPO3	70	97.849	Pongo_abelii
ENSCAPG00000005843	TNPO3	91	94.681	ENSPCAG00000010158	TNPO3	67	94.681	Procavia_capensis
ENSCAPG00000005843	TNPO3	73	97.561	ENSPCOG00000023901	TNPO3	63	97.561	Propithecus_coquereli
ENSCAPG00000005843	TNPO3	91	98.925	ENSPVAG00000015757	TNPO3	68	98.925	Pteropus_vampyrus
ENSCAPG00000005843	TNPO3	91	84.946	ENSPNYG00000002349	tnpo3	72	84.946	Pundamilia_nyererei
ENSCAPG00000005843	TNPO3	91	89.247	ENSPNAG00000001142	tnpo3	72	89.247	Pygocentrus_nattereri
ENSCAPG00000005843	TNPO3	91	97.849	ENSRNOG00000021758	Tnpo3	76	97.849	Rattus_norvegicus
ENSCAPG00000005843	TNPO3	91	96.774	ENSRBIG00000042549	TNPO3	76	96.774	Rhinopithecus_bieti
ENSCAPG00000005843	TNPO3	91	96.774	ENSRROG00000039264	TNPO3	70	96.774	Rhinopithecus_roxellana
ENSCAPG00000005843	TNPO3	82	74.545	ENSSBOG00000029642	TNPO3	64	74.545	Saimiri_boliviensis_boliviensis
ENSCAPG00000005843	TNPO3	91	97.849	ENSSHAG00000006837	TNPO3	74	97.849	Sarcophilus_harrisii
ENSCAPG00000005843	TNPO3	91	86.022	ENSSFOG00015004256	tnpo3	69	86.022	Scleropages_formosus
ENSCAPG00000005843	TNPO3	91	85.185	ENSSFOG00015001474	tnpo3	66	85.185	Scleropages_formosus
ENSCAPG00000005843	TNPO3	91	86.022	ENSSMAG00000010422	tnpo3	70	86.022	Scophthalmus_maximus
ENSCAPG00000005843	TNPO3	91	86.022	ENSSDUG00000004850	tnpo3	72	86.022	Seriola_dumerili
ENSCAPG00000005843	TNPO3	91	86.022	ENSSLDG00000016927	tnpo3	72	86.022	Seriola_lalandi_dorsalis
ENSCAPG00000005843	TNPO3	91	96.774	ENSSARG00000013893	TNPO3	71	96.774	Sorex_araneus
ENSCAPG00000005843	TNPO3	91	90.426	ENSSPUG00000007457	TNPO3	70	90.426	Sphenodon_punctatus
ENSCAPG00000005843	TNPO3	70	84.946	ENSSPAG00000014209	tnpo3	67	84.946	Stegastes_partitus
ENSCAPG00000005843	TNPO3	91	97.849	ENSSSCG00000016572	TNPO3	76	97.849	Sus_scrofa
ENSCAPG00000005843	TNPO3	91	83.871	ENSTNIG00000003347	tnpo3	72	83.871	Tetraodon_nigroviridis
ENSCAPG00000005843	TNPO3	77	100.000	ENSTBEG00000007220	TNPO3	60	100.000	Tupaia_belangeri
ENSCAPG00000005843	TNPO3	75	97.561	ENSTTRG00000014618	TNPO3	57	97.561	Tursiops_truncatus
ENSCAPG00000005843	TNPO3	91	97.849	ENSUAMG00000021281	TNPO3	70	97.849	Ursus_americanus
ENSCAPG00000005843	TNPO3	91	97.849	ENSUMAG00000006882	TNPO3	72	97.849	Ursus_maritimus
ENSCAPG00000005843	TNPO3	91	97.849	ENSVVUG00000011004	TNPO3	77	97.561	Vulpes_vulpes
ENSCAPG00000005843	TNPO3	91	89.011	ENSXETG00000015009	tnpo3	66	88.172	Xenopus_tropicalis
ENSCAPG00000005843	TNPO3	91	81.720	ENSXMAG00000013062	tnpo3	72	81.720	Xiphophorus_maculatus