EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006040 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 5482 bases
Position: chrAVPZ01000111.1:19963496-19968977
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003212	PseudoU_synth_2	PF00849.22	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000006770	RPUSD4-201	753	-	ENSCAPP00000003212	250 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006040	RPUSD4	100	79.457	ENSG00000165526	RPUSD4	68	79.457	Homo_sapiens
ENSCAPG00000006040	RPUSD4	93	50.612	ENSAPOG00000011024	rpusd4	61	50.612	Acanthochromis_polyacanthus
ENSCAPG00000006040	RPUSD4	100	76.744	ENSAMEG00000005953	-	77	76.744	Ailuropoda_melanoleuca
ENSCAPG00000006040	RPUSD4	100	78.682	ENSAMEG00000000127	-	68	78.682	Ailuropoda_melanoleuca
ENSCAPG00000006040	RPUSD4	93	47.154	ENSACIG00000003533	rpusd4	73	47.737	Amphilophus_citrinellus
ENSCAPG00000006040	RPUSD4	93	51.837	ENSAOCG00000015409	rpusd4	61	51.837	Amphiprion_ocellaris
ENSCAPG00000006040	RPUSD4	93	51.837	ENSAPEG00000018935	rpusd4	61	51.837	Amphiprion_percula
ENSCAPG00000006040	RPUSD4	93	49.388	ENSATEG00000008059	rpusd4	61	49.388	Anabas_testudineus
ENSCAPG00000006040	RPUSD4	93	55.556	ENSAPLG00000013250	RPUSD4	83	55.556	Anas_platyrhynchos
ENSCAPG00000006040	RPUSD4	95	59.438	ENSACAG00000000189	RPUSD4	68	59.438	Anolis_carolinensis
ENSCAPG00000006040	RPUSD4	98	79.051	ENSANAG00000024050	RPUSD4	68	79.051	Aotus_nancymaae
ENSCAPG00000006040	RPUSD4	93	48.980	ENSACLG00000020996	rpusd4	63	48.980	Astatotilapia_calliptera
ENSCAPG00000006040	RPUSD4	93	49.388	ENSAMXG00000031479	rpusd4	69	49.388	Astyanax_mexicanus
ENSCAPG00000006040	RPUSD4	98	75.794	ENSBTAG00000020900	RPUSD4	67	75.794	Bos_taurus
ENSCAPG00000006040	RPUSD4	97	78.486	ENSCJAG00000042850	RPUSD4	63	78.486	Callithrix_jacchus
ENSCAPG00000006040	RPUSD4	100	78.682	ENSCAFG00000010488	RPUSD4	68	78.682	Canis_familiaris
ENSCAPG00000006040	RPUSD4	100	78.682	ENSCAFG00020010621	RPUSD4	68	78.682	Canis_lupus_dingo
ENSCAPG00000006040	RPUSD4	98	75.794	ENSCHIG00000009975	RPUSD4	67	75.794	Capra_hircus
ENSCAPG00000006040	RPUSD4	100	82.558	ENSTSYG00000008456	RPUSD4	69	82.558	Carlito_syrichta
ENSCAPG00000006040	RPUSD4	100	96.124	ENSCPOG00000014971	RPUSD4	69	96.124	Cavia_porcellus
ENSCAPG00000006040	RPUSD4	98	79.842	ENSCCAG00000027838	RPUSD4	68	79.842	Cebus_capucinus
ENSCAPG00000006040	RPUSD4	100	79.457	ENSCATG00000041570	RPUSD4	68	79.457	Cercocebus_atys
ENSCAPG00000006040	RPUSD4	100	88.760	ENSCLAG00000016553	RPUSD4	68	88.760	Chinchilla_lanigera
ENSCAPG00000006040	RPUSD4	100	79.457	ENSCSAG00000002274	RPUSD4	68	79.457	Chlorocebus_sabaeus
ENSCAPG00000006040	RPUSD4	100	77.519	ENSCHOG00000010249	RPUSD4	91	77.519	Choloepus_hoffmanni
ENSCAPG00000006040	RPUSD4	95	62.097	ENSCPBG00000011175	RPUSD4	86	62.097	Chrysemys_picta_bellii
ENSCAPG00000006040	RPUSD4	99	38.491	ENSCSAVG00000000872	-	51	38.491	Ciona_savignyi
ENSCAPG00000006040	RPUSD4	100	78.682	ENSCANG00000039684	RPUSD4	68	78.682	Colobus_angolensis_palliatus
ENSCAPG00000006040	RPUSD4	100	81.008	ENSCGRG00001024141	Rpusd4	68	81.008	Cricetulus_griseus_chok1gshd
ENSCAPG00000006040	RPUSD4	100	81.008	ENSCGRG00000014415	Rpusd4	68	81.008	Cricetulus_griseus_crigri
ENSCAPG00000006040	RPUSD4	93	48.571	ENSCVAG00000008761	rpusd4	62	48.571	Cyprinodon_variegatus
ENSCAPG00000006040	RPUSD4	93	48.980	ENSCVAG00000000392	rpusd4	69	48.980	Cyprinodon_variegatus
ENSCAPG00000006040	RPUSD4	94	51.012	ENSDARG00000012674	rpusd4	68	51.012	Danio_rerio
ENSCAPG00000006040	RPUSD4	100	77.907	ENSDNOG00000020026	RPUSD4	69	77.907	Dasypus_novemcinctus
ENSCAPG00000006040	RPUSD4	98	78.968	ENSDORG00000016717	Rpusd4	67	78.968	Dipodomys_ordii
ENSCAPG00000006040	RPUSD4	97	76.378	ENSETEG00000013953	RPUSD4	69	76.378	Echinops_telfairi
ENSCAPG00000006040	RPUSD4	100	80.620	ENSEASG00005022982	RPUSD4	68	80.620	Equus_asinus_asinus
ENSCAPG00000006040	RPUSD4	100	80.620	ENSECAG00000000557	RPUSD4	68	80.620	Equus_caballus
ENSCAPG00000006040	RPUSD4	72	73.262	ENSEEUG00000014036	RPUSD4	50	73.262	Erinaceus_europaeus
ENSCAPG00000006040	RPUSD4	93	56.379	ENSELUG00000008075	rpusd4	63	56.379	Esox_lucius
ENSCAPG00000006040	RPUSD4	100	76.744	ENSFCAG00000029789	RPUSD4	68	76.744	Felis_catus
ENSCAPG00000006040	RPUSD4	94	58.197	ENSFALG00000005171	RPUSD4	71	58.197	Ficedula_albicollis
ENSCAPG00000006040	RPUSD4	100	84.109	ENSFDAG00000014307	RPUSD4	69	84.109	Fukomys_damarensis
ENSCAPG00000006040	RPUSD4	93	48.571	ENSFHEG00000004329	rpusd4	63	48.571	Fundulus_heteroclitus
ENSCAPG00000006040	RPUSD4	91	48.319	ENSGMOG00000017726	rpusd4	72	48.319	Gadus_morhua
ENSCAPG00000006040	RPUSD4	94	57.724	ENSGALG00000024326	RPUSD4	69	57.724	Gallus_gallus
ENSCAPG00000006040	RPUSD4	93	46.939	ENSGAFG00000021559	rpusd4	62	46.939	Gambusia_affinis
ENSCAPG00000006040	RPUSD4	92	49.383	ENSGACG00000001657	rpusd4	85	49.383	Gasterosteus_aculeatus
ENSCAPG00000006040	RPUSD4	96	60.643	ENSGAGG00000000132	RPUSD4	69	60.643	Gopherus_agassizii
ENSCAPG00000006040	RPUSD4	100	78.682	ENSGGOG00000016494	RPUSD4	68	78.682	Gorilla_gorilla
ENSCAPG00000006040	RPUSD4	93	48.980	ENSHBUG00000022838	rpusd4	63	48.980	Haplochromis_burtoni
ENSCAPG00000006040	RPUSD4	100	86.434	ENSHGLG00000002285	RPUSD4	68	86.434	Heterocephalus_glaber_female
ENSCAPG00000006040	RPUSD4	100	86.434	ENSHGLG00100006385	RPUSD4	68	86.434	Heterocephalus_glaber_male
ENSCAPG00000006040	RPUSD4	93	51.822	ENSHCOG00000006612	rpusd4	63	51.822	Hippocampus_comes
ENSCAPG00000006040	RPUSD4	94	53.252	ENSIPUG00000023879	rusd4	63	53.252	Ictalurus_punctatus
ENSCAPG00000006040	RPUSD4	95	82.449	ENSSTOG00000025280	RPUSD4	67	82.449	Ictidomys_tridecemlineatus
ENSCAPG00000006040	RPUSD4	98	81.818	ENSJJAG00000018673	Rpusd4	69	81.818	Jaculus_jaculus
ENSCAPG00000006040	RPUSD4	94	51.417	ENSKMAG00000021805	rpusd4	64	51.417	Kryptolebias_marmoratus
ENSCAPG00000006040	RPUSD4	93	51.020	ENSLBEG00000020394	rpusd4	68	51.230	Labrus_bergylta
ENSCAPG00000006040	RPUSD4	94	61.066	ENSLACG00000011028	RPUSD4	62	61.066	Latimeria_chalumnae
ENSCAPG00000006040	RPUSD4	94	45.122	ENSLOCG00000003124	rpusd4	64	45.122	Lepisosteus_oculatus
ENSCAPG00000006040	RPUSD4	100	76.744	ENSLAFG00000005211	RPUSD4	89	67.816	Loxodonta_africana
ENSCAPG00000006040	RPUSD4	100	80.233	ENSMFAG00000039513	RPUSD4	68	80.233	Macaca_fascicularis
ENSCAPG00000006040	RPUSD4	100	80.233	ENSMMUG00000007933	RPUSD4	68	80.233	Macaca_mulatta
ENSCAPG00000006040	RPUSD4	100	79.845	ENSMNEG00000027414	RPUSD4	68	79.845	Macaca_nemestrina
ENSCAPG00000006040	RPUSD4	100	79.845	ENSMLEG00000042461	RPUSD4	68	79.845	Mandrillus_leucophaeus
ENSCAPG00000006040	RPUSD4	93	46.531	ENSMAMG00000023839	rpusd4	63	46.531	Mastacembelus_armatus
ENSCAPG00000006040	RPUSD4	93	48.980	ENSMZEG00005011999	rpusd4	63	48.980	Maylandia_zebra
ENSCAPG00000006040	RPUSD4	94	56.504	ENSMGAG00000000840	RPUSD4	77	56.504	Meleagris_gallopavo
ENSCAPG00000006040	RPUSD4	100	78.682	ENSMAUG00000010280	Rpusd4	68	78.682	Mesocricetus_auratus
ENSCAPG00000006040	RPUSD4	100	81.008	ENSMICG00000015979	RPUSD4	78	81.008	Microcebus_murinus
ENSCAPG00000006040	RPUSD4	100	76.744	ENSMOCG00000000661	Rpusd4	68	76.744	Microtus_ochrogaster
ENSCAPG00000006040	RPUSD4	92	52.066	ENSMMOG00000021731	rpusd4	73	52.066	Mola_mola
ENSCAPG00000006040	RPUSD4	88	71.806	ENSMODG00000004521	RPUSD4	58	71.806	Monodelphis_domestica
ENSCAPG00000006040	RPUSD4	94	49.393	ENSMALG00000005839	rpusd4	74	49.393	Monopterus_albus
ENSCAPG00000006040	RPUSD4	100	79.457	MGP_CAROLIEiJ_G0031954	Rpusd4	68	79.457	Mus_caroli
ENSCAPG00000006040	RPUSD4	100	79.070	ENSMUSG00000032044	Rpusd4	68	79.070	Mus_musculus
ENSCAPG00000006040	RPUSD4	100	80.233	MGP_PahariEiJ_G0014819	Rpusd4	68	80.233	Mus_pahari
ENSCAPG00000006040	RPUSD4	100	79.845	MGP_SPRETEiJ_G0033078	Rpusd4	68	79.845	Mus_spretus
ENSCAPG00000006040	RPUSD4	98	77.778	ENSMPUG00000006608	RPUSD4	67	77.778	Mustela_putorius_furo
ENSCAPG00000006040	RPUSD4	95	81.633	ENSMLUG00000029348	-	96	81.633	Myotis_lucifugus
ENSCAPG00000006040	RPUSD4	96	80.972	ENSMLUG00000017328	-	65	80.972	Myotis_lucifugus
ENSCAPG00000006040	RPUSD4	98	82.143	ENSNGAG00000020847	Rpusd4	67	82.143	Nannospalax_galili
ENSCAPG00000006040	RPUSD4	93	49.388	ENSNBRG00000005207	rpusd4	71	49.388	Neolamprologus_brichardi
ENSCAPG00000006040	RPUSD4	100	79.845	ENSNLEG00000007465	RPUSD4	68	79.845	Nomascus_leucogenys
ENSCAPG00000006040	RPUSD4	97	67.331	ENSMEUG00000004370	RPUSD4	68	67.331	Notamacropus_eugenii
ENSCAPG00000006040	RPUSD4	58	86.301	ENSOPRG00000013141	-	55	86.301	Ochotona_princeps
ENSCAPG00000006040	RPUSD4	100	87.209	ENSODEG00000004577	RPUSD4	68	87.209	Octodon_degus
ENSCAPG00000006040	RPUSD4	93	48.980	ENSONIG00000018879	rpusd4	66	48.980	Oreochromis_niloticus
ENSCAPG00000006040	RPUSD4	93	63.525	ENSOANG00000007247	RPUSD4	79	63.415	Ornithorhynchus_anatinus
ENSCAPG00000006040	RPUSD4	98	80.392	ENSOCUG00000017039	RPUSD4	68	80.392	Oryctolagus_cuniculus
ENSCAPG00000006040	RPUSD4	92	51.029	ENSORLG00000002750	rpusd4	66	51.046	Oryzias_latipes
ENSCAPG00000006040	RPUSD4	91	51.250	ENSORLG00020002044	rpusd4	60	51.250	Oryzias_latipes_hni
ENSCAPG00000006040	RPUSD4	91	50.833	ENSORLG00015020034	rpusd4	60	50.833	Oryzias_latipes_hsok
ENSCAPG00000006040	RPUSD4	97	51.362	ENSOMEG00000004861	rpusd4	64	51.362	Oryzias_melastigma
ENSCAPG00000006040	RPUSD4	100	80.233	ENSOGAG00000008922	RPUSD4	68	80.233	Otolemur_garnettii
ENSCAPG00000006040	RPUSD4	98	76.190	ENSOARG00000012238	RPUSD4	66	76.190	Ovis_aries
ENSCAPG00000006040	RPUSD4	100	79.457	ENSPPAG00000042883	RPUSD4	64	79.457	Pan_paniscus
ENSCAPG00000006040	RPUSD4	100	77.132	ENSPPRG00000003081	RPUSD4	68	77.132	Panthera_pardus
ENSCAPG00000006040	RPUSD4	100	77.132	ENSPTIG00000012059	RPUSD4	74	77.132	Panthera_tigris_altaica
ENSCAPG00000006040	RPUSD4	100	79.457	ENSPTRG00000004454	RPUSD4	68	79.457	Pan_troglodytes
ENSCAPG00000006040	RPUSD4	100	80.620	ENSPANG00000015040	RPUSD4	68	80.620	Papio_anubis
ENSCAPG00000006040	RPUSD4	94	58.300	ENSPKIG00000023986	rpusd4	63	58.300	Paramormyrops_kingsleyae
ENSCAPG00000006040	RPUSD4	94	61.224	ENSPSIG00000014268	RPUSD4	78	61.224	Pelodiscus_sinensis
ENSCAPG00000006040	RPUSD4	92	48.770	ENSPMGG00000002806	rpusd4	68	48.954	Periophthalmus_magnuspinnatus
ENSCAPG00000006040	RPUSD4	100	72.000	ENSPEMG00000000278	Rpusd4	66	72.000	Peromyscus_maniculatus_bairdii
ENSCAPG00000006040	RPUSD4	95	42.294	ENSPMAG00000008183	rpusd4	81	42.294	Petromyzon_marinus
ENSCAPG00000006040	RPUSD4	95	69.796	ENSPCIG00000010212	RPUSD4	67	69.796	Phascolarctos_cinereus
ENSCAPG00000006040	RPUSD4	93	48.178	ENSPFOG00000019030	rpusd4	64	48.178	Poecilia_formosa
ENSCAPG00000006040	RPUSD4	93	48.980	ENSPLAG00000016848	rpusd4	62	48.980	Poecilia_latipinna
ENSCAPG00000006040	RPUSD4	93	47.347	ENSPMEG00000017534	rpusd4	62	47.347	Poecilia_mexicana
ENSCAPG00000006040	RPUSD4	89	47.458	ENSPREG00000005689	rpusd4	61	47.458	Poecilia_reticulata
ENSCAPG00000006040	RPUSD4	100	79.845	ENSPPYG00000004043	RPUSD4	68	79.845	Pongo_abelii
ENSCAPG00000006040	RPUSD4	70	73.370	ENSPCAG00000000753	RPUSD4	50	73.370	Procavia_capensis
ENSCAPG00000006040	RPUSD4	87	82.222	ENSPCOG00000020694	RPUSD4	66	82.222	Propithecus_coquereli
ENSCAPG00000006040	RPUSD4	96	80.080	ENSPVAG00000000988	RPUSD4	67	80.080	Pteropus_vampyrus
ENSCAPG00000006040	RPUSD4	93	48.163	ENSPNYG00000009652	rpusd4	63	48.163	Pundamilia_nyererei
ENSCAPG00000006040	RPUSD4	94	49.796	ENSPNAG00000012264	rpusd4	65	49.796	Pygocentrus_nattereri
ENSCAPG00000006040	RPUSD4	100	79.070	ENSRNOG00000011567	Rpusd4	68	79.070	Rattus_norvegicus
ENSCAPG00000006040	RPUSD4	94	82.231	ENSRBIG00000034842	RPUSD4	68	79.845	Rhinopithecus_bieti
ENSCAPG00000006040	RPUSD4	94	82.231	ENSRROG00000039753	RPUSD4	68	79.845	Rhinopithecus_roxellana
ENSCAPG00000006040	RPUSD4	98	77.866	ENSSBOG00000030413	RPUSD4	68	77.866	Saimiri_boliviensis_boliviensis
ENSCAPG00000006040	RPUSD4	95	70.204	ENSSHAG00000008304	RPUSD4	81	70.204	Sarcophilus_harrisii
ENSCAPG00000006040	RPUSD4	94	57.895	ENSSFOG00015006203	rpusd4	67	57.895	Scleropages_formosus
ENSCAPG00000006040	RPUSD4	93	49.796	ENSSMAG00000020978	rpusd4	64	49.796	Scophthalmus_maximus
ENSCAPG00000006040	RPUSD4	92	50.413	ENSSDUG00000013399	rpusd4	64	50.413	Seriola_dumerili
ENSCAPG00000006040	RPUSD4	92	50.413	ENSSLDG00000023507	rpusd4	64	50.413	Seriola_lalandi_dorsalis
ENSCAPG00000006040	RPUSD4	95	63.563	ENSSPUG00000001401	RPUSD4	68	63.563	Sphenodon_punctatus
ENSCAPG00000006040	RPUSD4	93	50.204	ENSSPAG00000012163	rpusd4	63	50.204	Stegastes_partitus
ENSCAPG00000006040	RPUSD4	98	81.746	ENSSSCG00000015233	RPUSD4	67	81.746	Sus_scrofa
ENSCAPG00000006040	RPUSD4	94	57.787	ENSTGUG00000000773	RPUSD4	81	57.787	Taeniopygia_guttata
ENSCAPG00000006040	RPUSD4	92	49.180	ENSTRUG00000012283	rpusd4	63	49.180	Takifugu_rubripes
ENSCAPG00000006040	RPUSD4	92	50.000	ENSTNIG00000014676	rpusd4	62	50.000	Tetraodon_nigroviridis
ENSCAPG00000006040	RPUSD4	58	89.394	ENSTBEG00000014664	-	56	89.394	Tupaia_belangeri
ENSCAPG00000006040	RPUSD4	98	78.571	ENSTTRG00000001555	RPUSD4	67	78.571	Tursiops_truncatus
ENSCAPG00000006040	RPUSD4	61	68.750	ENSUAMG00000005500	-	100	68.750	Ursus_americanus
ENSCAPG00000006040	RPUSD4	100	77.907	ENSUMAG00000002219	RPUSD4	68	77.907	Ursus_maritimus
ENSCAPG00000006040	RPUSD4	58	86.301	ENSVPAG00000001066	RPUSD4	55	86.301	Vicugna_pacos
ENSCAPG00000006040	RPUSD4	100	78.682	ENSVVUG00000020101	RPUSD4	68	78.682	Vulpes_vulpes
ENSCAPG00000006040	RPUSD4	93	48.571	ENSXCOG00000004676	rpusd4	65	48.571	Xiphophorus_couchianus
ENSCAPG00000006040	RPUSD4	93	48.571	ENSXMAG00000023351	rpusd4	62	48.571	Xiphophorus_maculatus