EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006065 (Gene tree)
Gene ID: -
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 9218 bases
Position: chrAVPZ01000367.1:6704758-6713975
Accession: 10769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003255	DUF382	PF04037.13	3.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000006814	SF3B2-201	1521	-	ENSCAPP00000003255	507 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006065	SF3B2	93	100.000	ENSG00000087365	SF3B2	95	96.053	Homo_sapiens
ENSCAPG00000006065	SF3B2	93	99.160	ENSAMEG00000017206	SF3B2	62	80.870	Ailuropoda_melanoleuca
ENSCAPG00000006065	SF3B2	85	91.525	ENSAOCG00000009207	sf3b2	50	60.317	Amphiprion_ocellaris
ENSCAPG00000006065	SF3B2	93	100.000	ENSANAG00000029120	SF3B2	61	97.895	Aotus_nancymaae
ENSCAPG00000006065	SF3B2	79	89.831	ENSACLG00000014771	sf3b2	50	61.628	Astatotilapia_calliptera
ENSCAPG00000006065	SF3B2	93	100.000	ENSBTAG00000002778	SF3B2	62	80.870	Bos_taurus
ENSCAPG00000006065	SF3B2	67	53.913	WBGene00021004	sftb-2	56	54.783	Caenorhabditis_elegans
ENSCAPG00000006065	SF3B2	93	100.000	ENSCJAG00000001656	SF3B2	61	98.947	Callithrix_jacchus
ENSCAPG00000006065	SF3B2	93	100.000	ENSCAFG00000013033	SF3B2	62	80.870	Canis_familiaris
ENSCAPG00000006065	SF3B2	93	100.000	ENSCAFG00020015382	SF3B2	62	80.870	Canis_lupus_dingo
ENSCAPG00000006065	SF3B2	93	100.000	ENSCHIG00000011211	SF3B2	62	80.870	Capra_hircus
ENSCAPG00000006065	SF3B2	93	100.000	ENSTSYG00000000959	SF3B2	61	96.842	Carlito_syrichta
ENSCAPG00000006065	SF3B2	93	100.000	ENSCPOG00000008294	SF3B2	67	100.000	Cavia_porcellus
ENSCAPG00000006065	SF3B2	93	100.000	ENSCCAG00000035256	SF3B2	61	98.947	Cebus_capucinus
ENSCAPG00000006065	SF3B2	93	100.000	ENSCATG00000042240	SF3B2	61	98.947	Cercocebus_atys
ENSCAPG00000006065	SF3B2	93	100.000	ENSCLAG00000016852	SF3B2	61	100.000	Chinchilla_lanigera
ENSCAPG00000006065	SF3B2	93	100.000	ENSCSAG00000008121	SF3B2	62	83.929	Chlorocebus_sabaeus
ENSCAPG00000006065	SF3B2	86	98.667	ENSCHOG00000001476	SF3B2	51	98.667	Choloepus_hoffmanni
ENSCAPG00000006065	SF3B2	90	96.610	ENSCPBG00000022465	SF3B2	77	59.147	Chrysemys_picta_bellii
ENSCAPG00000006065	SF3B2	67	67.797	ENSCING00000005665	-	59	67.797	Ciona_intestinalis
ENSCAPG00000006065	SF3B2	68	69.748	ENSCSAVG00000002029	-	55	68.908	Ciona_savignyi
ENSCAPG00000006065	SF3B2	93	100.000	ENSCANG00000039680	SF3B2	61	98.947	Colobus_angolensis_palliatus
ENSCAPG00000006065	SF3B2	93	100.000	ENSCGRG00001015741	Sf3b2	61	95.789	Cricetulus_griseus_chok1gshd
ENSCAPG00000006065	SF3B2	93	100.000	ENSCGRG00000018110	Sf3b2	63	95.789	Cricetulus_griseus_crigri
ENSCAPG00000006065	SF3B2	67	82.096	ENSCSEG00000000230	sf3b2	53	58.605	Cynoglossus_semilaevis
ENSCAPG00000006065	SF3B2	81	89.831	ENSCVAG00000003357	sf3b2	50	61.538	Cyprinodon_variegatus
ENSCAPG00000006065	SF3B2	89	100.000	ENSDNOG00000009484	SF3B2	65	95.122	Dasypus_novemcinctus
ENSCAPG00000006065	SF3B2	93	100.000	ENSDORG00000002495	Sf3b2	61	97.895	Dipodomys_ordii
ENSCAPG00000006065	SF3B2	93	100.000	ENSEASG00005004508	SF3B2	62	79.310	Equus_asinus_asinus
ENSCAPG00000006065	SF3B2	93	100.000	ENSECAG00000024461	SF3B2	62	79.310	Equus_caballus
ENSCAPG00000006065	SF3B2	86	94.068	ENSELUG00000005586	sf3b2	52	63.221	Esox_lucius
ENSCAPG00000006065	SF3B2	93	100.000	ENSFCAG00000013289	SF3B2	59	98.667	Felis_catus
ENSCAPG00000006065	SF3B2	68	83.051	ENSFALG00000014653	SF3B2	59	57.627	Ficedula_albicollis
ENSCAPG00000006065	SF3B2	93	100.000	ENSFDAG00000019806	SF3B2	61	98.947	Fukomys_damarensis
ENSCAPG00000006065	SF3B2	68	90.678	ENSGMOG00000012131	sf3b2	58	90.678	Gadus_morhua
ENSCAPG00000006065	SF3B2	68	88.136	ENSGACG00000019012	sf3b2	56	88.136	Gasterosteus_aculeatus
ENSCAPG00000006065	SF3B2	87	96.610	ENSGAGG00000023916	SF3B2	59	71.831	Gopherus_agassizii
ENSCAPG00000006065	SF3B2	93	100.000	ENSGGOG00000028448	SF3B2	61	94.000	Gorilla_gorilla
ENSCAPG00000006065	SF3B2	68	89.831	ENSHBUG00000017349	sf3b2	50	61.628	Haplochromis_burtoni
ENSCAPG00000006065	SF3B2	93	100.000	ENSHGLG00000010807	SF3B2	61	98.947	Heterocephalus_glaber_female
ENSCAPG00000006065	SF3B2	93	100.000	ENSHGLG00100006361	SF3B2	61	98.947	Heterocephalus_glaber_male
ENSCAPG00000006065	SF3B2	93	100.000	ENSSTOG00000028892	SF3B2	61	97.895	Ictidomys_tridecemlineatus
ENSCAPG00000006065	SF3B2	93	100.000	ENSJJAG00000018193	Sf3b2	61	98.947	Jaculus_jaculus
ENSCAPG00000006065	SF3B2	78	91.525	ENSLBEG00000027739	sf3b2	60	61.574	Labrus_bergylta
ENSCAPG00000006065	SF3B2	89	99.153	ENSLAFG00000002128	SF3B2	59	97.561	Loxodonta_africana
ENSCAPG00000006065	SF3B2	93	99.160	ENSMFAG00000003064	SF3B2	61	98.947	Macaca_fascicularis
ENSCAPG00000006065	SF3B2	93	100.000	ENSMNEG00000034437	SF3B2	62	92.157	Macaca_nemestrina
ENSCAPG00000006065	SF3B2	93	100.000	ENSMLEG00000029373	SF3B2	62	91.176	Mandrillus_leucophaeus
ENSCAPG00000006065	SF3B2	56	100.000	ENSMAUG00000017040	Sf3b2	51	95.789	Mesocricetus_auratus
ENSCAPG00000006065	SF3B2	89	98.319	ENSMICG00000016942	-	59	88.060	Microcebus_murinus
ENSCAPG00000006065	SF3B2	93	100.000	ENSMICG00000008565	-	61	95.789	Microcebus_murinus
ENSCAPG00000006065	SF3B2	93	99.153	ENSMOCG00000003136	Sf3b2	61	94.737	Microtus_ochrogaster
ENSCAPG00000006065	SF3B2	88	100.000	ENSMODG00000008490	-	63	80.519	Monodelphis_domestica
ENSCAPG00000006065	SF3B2	74	85.593	ENSMODG00000025020	-	59	83.525	Monodelphis_domestica
ENSCAPG00000006065	SF3B2	68	82.759	ENSMALG00000015137	sf3b2	50	60.140	Monopterus_albus
ENSCAPG00000006065	SF3B2	93	100.000	MGP_CAROLIEiJ_G0022539	Sf3b2	61	95.789	Mus_caroli
ENSCAPG00000006065	SF3B2	93	100.000	ENSMUSG00000024853	Sf3b2	61	95.789	Mus_musculus
ENSCAPG00000006065	SF3B2	93	100.000	MGP_PahariEiJ_G0014036	Sf3b2	61	95.789	Mus_pahari
ENSCAPG00000006065	SF3B2	93	100.000	MGP_SPRETEiJ_G0023453	Sf3b2	61	95.789	Mus_spretus
ENSCAPG00000006065	SF3B2	93	100.000	ENSMPUG00000011349	SF3B2	62	80.870	Mustela_putorius_furo
ENSCAPG00000006065	SF3B2	93	100.000	ENSMLUG00000011136	SF3B2	62	79.130	Myotis_lucifugus
ENSCAPG00000006065	SF3B2	93	100.000	ENSNGAG00000012103	Sf3b2	61	97.895	Nannospalax_galili
ENSCAPG00000006065	SF3B2	97	100.000	ENSNLEG00000006007	SF3B2	57	96.970	Nomascus_leucogenys
ENSCAPG00000006065	SF3B2	91	100.000	ENSODEG00000017764	SF3B2	60	98.592	Octodon_degus
ENSCAPG00000006065	SF3B2	81	89.831	ENSONIG00000013068	sf3b2	55	68.889	Oreochromis_niloticus
ENSCAPG00000006065	SF3B2	94	78.947	ENSOANG00000012482	SF3B2	59	83.099	Ornithorhynchus_anatinus
ENSCAPG00000006065	SF3B2	74	66.154	ENSOCUG00000024154	-	76	65.625	Oryctolagus_cuniculus
ENSCAPG00000006065	SF3B2	93	100.000	ENSOCUG00000015722	-	63	81.188	Oryctolagus_cuniculus
ENSCAPG00000006065	SF3B2	96	90.678	ENSORLG00015022454	sf3b2	59	60.235	Oryzias_latipes_hsok
ENSCAPG00000006065	SF3B2	93	100.000	ENSOGAG00000005799	SF3B2	62	83.036	Otolemur_garnettii
ENSCAPG00000006065	SF3B2	88	100.000	ENSOARG00000002125	SF3B2	60	100.000	Ovis_aries
ENSCAPG00000006065	SF3B2	93	100.000	ENSPPAG00000007359	SF3B2	61	94.000	Pan_paniscus
ENSCAPG00000006065	SF3B2	93	100.000	ENSPPRG00000013334	SF3B2	59	98.667	Panthera_pardus
ENSCAPG00000006065	SF3B2	93	100.000	ENSPTIG00000015022	SF3B2	59	98.667	Panthera_tigris_altaica
ENSCAPG00000006065	SF3B2	93	100.000	ENSPTRG00000003912	SF3B2	61	94.000	Pan_troglodytes
ENSCAPG00000006065	SF3B2	93	100.000	ENSPANG00000008593	SF3B2	61	98.947	Papio_anubis
ENSCAPG00000006065	SF3B2	90	93.220	ENSPKIG00000016576	sf3b2	69	93.220	Paramormyrops_kingsleyae
ENSCAPG00000006065	SF3B2	95	95.763	ENSPSIG00000003158	SF3B2	67	70.423	Pelodiscus_sinensis
ENSCAPG00000006065	SF3B2	93	100.000	ENSPEMG00000015437	Sf3b2	61	95.789	Peromyscus_maniculatus_bairdii
ENSCAPG00000006065	SF3B2	94	86.441	ENSPEMG00000015451	-	65	74.444	Peromyscus_maniculatus_bairdii
ENSCAPG00000006065	SF3B2	88	100.000	ENSPCIG00000008381	SF3B2	62	78.161	Phascolarctos_cinereus
ENSCAPG00000006065	SF3B2	68	90.678	ENSPREG00000002665	sf3b2	50	61.343	Poecilia_reticulata
ENSCAPG00000006065	SF3B2	70	96.169	ENSPPYG00000003034	-	55	96.169	Pongo_abelii
ENSCAPG00000006065	SF3B2	89	100.000	ENSPCAG00000005129	SF3B2	60	80.808	Procavia_capensis
ENSCAPG00000006065	SF3B2	93	100.000	ENSPCOG00000025375	SF3B2	61	96.842	Propithecus_coquereli
ENSCAPG00000006065	SF3B2	84	100.000	ENSPVAG00000005466	-	68	84.173	Pteropus_vampyrus
ENSCAPG00000006065	SF3B2	68	62.954	ENSPNYG00000023594	sf3b2	57	61.201	Pundamilia_nyererei
ENSCAPG00000006065	SF3B2	93	98.305	ENSRNOG00000020412	Sf3b2	61	95.789	Rattus_norvegicus
ENSCAPG00000006065	SF3B2	93	100.000	ENSRBIG00000034065	SF3B2	61	98.947	Rhinopithecus_bieti
ENSCAPG00000006065	SF3B2	93	100.000	ENSRROG00000034496	SF3B2	61	98.947	Rhinopithecus_roxellana
ENSCAPG00000006065	SF3B2	93	100.000	ENSSBOG00000026337	SF3B2	63	78.992	Saimiri_boliviensis_boliviensis
ENSCAPG00000006065	SF3B2	90	61.982	ENSSHAG00000018043	-	61	61.991	Sarcophilus_harrisii
ENSCAPG00000006065	SF3B2	85	100.000	ENSSHAG00000010933	-	57	68.235	Sarcophilus_harrisii
ENSCAPG00000006065	SF3B2	79	90.678	ENSSMAG00000004079	sf3b2	50	61.628	Scophthalmus_maximus
ENSCAPG00000006065	SF3B2	67	91.525	ENSSDUG00000008499	sf3b2	75	63.990	Seriola_dumerili
ENSCAPG00000006065	SF3B2	79	91.525	ENSSLDG00000006838	sf3b2	57	62.181	Seriola_lalandi_dorsalis
ENSCAPG00000006065	SF3B2	77	53.755	ENSSARG00000003707	-	57	53.755	Sorex_araneus
ENSCAPG00000006065	SF3B2	82	98.305	ENSSPUG00000009198	SF3B2	58	70.588	Sphenodon_punctatus
ENSCAPG00000006065	SF3B2	93	100.000	ENSSSCG00000012957	SF3B2	71	78.947	Sus_scrofa
ENSCAPG00000006065	SF3B2	68	73.522	ENSTRUG00000007611	sf3b2	78	59.347	Takifugu_rubripes
ENSCAPG00000006065	SF3B2	68	63.840	ENSTNIG00000007441	sf3b2	51	56.542	Tetraodon_nigroviridis
ENSCAPG00000006065	SF3B2	93	100.000	ENSTTRG00000014339	SF3B2	62	80.000	Tursiops_truncatus
ENSCAPG00000006065	SF3B2	93	100.000	ENSUAMG00000020754	SF3B2	67	80.870	Ursus_americanus
ENSCAPG00000006065	SF3B2	93	100.000	ENSUMAG00000010994	SF3B2	62	80.870	Ursus_maritimus
ENSCAPG00000006065	SF3B2	93	100.000	ENSVVUG00000027029	SF3B2	62	80.870	Vulpes_vulpes
ENSCAPG00000006065	SF3B2	90	89.831	ENSXCOG00000008943	sf3b2	74	54.614	Xiphophorus_couchianus