EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006213 (Gene tree)
Gene ID: -
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 58279 bases
Position: chrAVPZ01000012.1:13237240-13295518
Accession: 7880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003496	RRM_1	PF00076.22	5.5e-06	1	1
ENSCAPP00000003488	RRM_1	PF00076.22	6.7e-06	1	1
ENSCAPP00000003483	RRM_1	PF00076.22	7.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007043	CNOT4-201	2133	-	ENSCAPP00000003483	710 (aa)	-	-
ENSCAPT00000007056	CNOT4-203	1743	-	ENSCAPP00000003496	580 (aa)	-	-
ENSCAPT00000007048	CNOT4-202	1929	-	ENSCAPP00000003488	642 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006213	CNOT4	100	95.639	ENSG00000080802	CNOT4	99	99.020	Homo_sapiens
ENSCAPG00000006213	CNOT4	93	90.189	ENSAPOG00000016272	cnot4a	82	90.189	Acanthochromis_polyacanthus
ENSCAPG00000006213	CNOT4	92	99.070	ENSAMEG00000012081	CNOT4	99	97.059	Ailuropoda_melanoleuca
ENSCAPG00000006213	CNOT4	99	90.189	ENSACIG00000003011	cnot4a	91	90.189	Amphilophus_citrinellus
ENSCAPG00000006213	CNOT4	99	90.189	ENSAOCG00000010792	cnot4a	91	90.189	Amphiprion_ocellaris
ENSCAPG00000006213	CNOT4	99	90.189	ENSAPEG00000004680	cnot4a	91	90.189	Amphiprion_percula
ENSCAPG00000006213	CNOT4	99	89.811	ENSATEG00000017580	cnot4a	91	89.811	Anabas_testudineus
ENSCAPG00000006213	CNOT4	100	85.827	ENSAPLG00000016441	CNOT4	100	85.827	Anas_platyrhynchos
ENSCAPG00000006213	CNOT4	100	85.433	ENSACAG00000011154	CNOT4	100	85.433	Anolis_carolinensis
ENSCAPG00000006213	CNOT4	100	95.634	ENSANAG00000032156	CNOT4	99	99.020	Aotus_nancymaae
ENSCAPG00000006213	CNOT4	99	90.189	ENSACLG00000002514	cnot4a	91	90.189	Astatotilapia_calliptera
ENSCAPG00000006213	CNOT4	100	84.437	ENSAMXG00000001373	cnot4a	95	84.437	Astyanax_mexicanus
ENSCAPG00000006213	CNOT4	100	71.028	ENSAMXG00000011473	cnot4b	100	70.519	Astyanax_mexicanus
ENSCAPG00000006213	CNOT4	100	95.639	ENSBTAG00000017919	CNOT4	99	97.059	Bos_taurus
ENSCAPG00000006213	CNOT4	100	95.634	ENSCJAG00000012532	CNOT4	99	99.020	Callithrix_jacchus
ENSCAPG00000006213	CNOT4	100	95.794	ENSCAFG00000003223	CNOT4	99	98.039	Canis_familiaris
ENSCAPG00000006213	CNOT4	100	95.171	ENSCAFG00020000093	CNOT4	100	95.171	Canis_lupus_dingo
ENSCAPG00000006213	CNOT4	100	94.704	ENSCHIG00000010955	CNOT4	100	94.704	Capra_hircus
ENSCAPG00000006213	CNOT4	100	95.483	ENSTSYG00000000893	CNOT4	99	97.059	Carlito_syrichta
ENSCAPG00000006213	CNOT4	99	99.020	ENSCPOG00000011526	CNOT4	99	99.020	Cavia_porcellus
ENSCAPG00000006213	CNOT4	100	95.639	ENSCCAG00000024414	CNOT4	99	99.020	Cebus_capucinus
ENSCAPG00000006213	CNOT4	100	95.639	ENSCATG00000022607	CNOT4	99	99.020	Cercocebus_atys
ENSCAPG00000006213	CNOT4	99	99.020	ENSCLAG00000001857	CNOT4	99	99.020	Chinchilla_lanigera
ENSCAPG00000006213	CNOT4	100	95.634	ENSCSAG00000009096	CNOT4	99	99.020	Chlorocebus_sabaeus
ENSCAPG00000006213	CNOT4	68	98.930	ENSCHOG00000010412	CNOT4	63	98.930	Choloepus_hoffmanni
ENSCAPG00000006213	CNOT4	100	92.286	ENSCPBG00000004959	CNOT4	100	92.286	Chrysemys_picta_bellii
ENSCAPG00000006213	CNOT4	66	69.323	ENSCING00000004364	-	66	69.323	Ciona_intestinalis
ENSCAPG00000006213	CNOT4	100	95.483	ENSCANG00000029319	CNOT4	99	99.020	Colobus_angolensis_palliatus
ENSCAPG00000006213	CNOT4	100	95.493	ENSCGRG00001014651	Cnot4	99	98.039	Cricetulus_griseus_chok1gshd
ENSCAPG00000006213	CNOT4	100	95.493	ENSCGRG00000005727	Cnot4	99	98.039	Cricetulus_griseus_crigri
ENSCAPG00000006213	CNOT4	94	90.189	ENSCSEG00000015080	cnot4a	84	90.189	Cynoglossus_semilaevis
ENSCAPG00000006213	CNOT4	99	90.189	ENSCVAG00000009399	cnot4a	91	90.189	Cyprinodon_variegatus
ENSCAPG00000006213	CNOT4	100	88.971	ENSDARG00000007045	cnot4a	91	88.971	Danio_rerio
ENSCAPG00000006213	CNOT4	99	93.585	ENSDARG00000007639	cnot4b	92	92.251	Danio_rerio
ENSCAPG00000006213	CNOT4	100	94.250	ENSDNOG00000009409	CNOT4	100	94.250	Dasypus_novemcinctus
ENSCAPG00000006213	CNOT4	100	95.070	ENSDORG00000012268	Cnot4	100	95.070	Dipodomys_ordii
ENSCAPG00000006213	CNOT4	100	89.060	ENSETEG00000013407	CNOT4	88	95.082	Echinops_telfairi
ENSCAPG00000006213	CNOT4	100	95.483	ENSEASG00005014430	CNOT4	99	98.039	Equus_asinus_asinus
ENSCAPG00000006213	CNOT4	100	95.483	ENSECAG00000020262	CNOT4	99	98.039	Equus_caballus
ENSCAPG00000006213	CNOT4	100	73.591	ENSELUG00000011540	cnot4b	96	73.373	Esox_lucius
ENSCAPG00000006213	CNOT4	99	90.262	ENSELUG00000008742	cnot4a	90	90.262	Esox_lucius
ENSCAPG00000006213	CNOT4	100	95.493	ENSFCAG00000011904	CNOT4	99	98.039	Felis_catus
ENSCAPG00000006213	CNOT4	100	85.827	ENSFALG00000011194	CNOT4	100	85.827	Ficedula_albicollis
ENSCAPG00000006213	CNOT4	100	95.639	ENSFDAG00000013525	CNOT4	100	95.639	Fukomys_damarensis
ENSCAPG00000006213	CNOT4	100	88.889	ENSFHEG00000006608	cnot4a	91	88.889	Fundulus_heteroclitus
ENSCAPG00000006213	CNOT4	96	57.951	ENSGMOG00000001329	cnot4a	97	59.149	Gadus_morhua
ENSCAPG00000006213	CNOT4	100	92.006	ENSGALG00000011682	CNOT4	100	92.006	Gallus_gallus
ENSCAPG00000006213	CNOT4	99	89.811	ENSGACG00000004276	cnot4a	91	89.811	Gasterosteus_aculeatus
ENSCAPG00000006213	CNOT4	99	94.118	ENSGAGG00000017331	CNOT4	100	92.286	Gopherus_agassizii
ENSCAPG00000006213	CNOT4	92	94.970	ENSGGOG00000000142	CNOT4	97	99.020	Gorilla_gorilla
ENSCAPG00000006213	CNOT4	99	90.189	ENSHBUG00000000027	cnot4a	91	90.189	Haplochromis_burtoni
ENSCAPG00000006213	CNOT4	100	95.639	ENSHGLG00000011533	CNOT4	100	95.639	Heterocephalus_glaber_female
ENSCAPG00000006213	CNOT4	98	91.754	ENSHGLG00100013058	CNOT4	99	91.754	Heterocephalus_glaber_male
ENSCAPG00000006213	CNOT4	98	89.057	ENSHCOG00000015815	cnot4a	91	89.057	Hippocampus_comes
ENSCAPG00000006213	CNOT4	100	92.251	ENSIPUG00000016994	cnot4b	100	69.276	Ictalurus_punctatus
ENSCAPG00000006213	CNOT4	100	84.385	ENSIPUG00000006393	cnot4	100	70.000	Ictalurus_punctatus
ENSCAPG00000006213	CNOT4	100	95.634	ENSSTOG00000007717	CNOT4	99	97.059	Ictidomys_tridecemlineatus
ENSCAPG00000006213	CNOT4	98	76.316	ENSJJAG00000019991	-	99	76.316	Jaculus_jaculus
ENSCAPG00000006213	CNOT4	100	95.493	ENSJJAG00000016618	Cnot4	99	98.039	Jaculus_jaculus
ENSCAPG00000006213	CNOT4	94	90.189	ENSKMAG00000004581	cnot4a	100	70.213	Kryptolebias_marmoratus
ENSCAPG00000006213	CNOT4	99	90.566	ENSLBEG00000009999	cnot4a	91	90.566	Labrus_bergylta
ENSCAPG00000006213	CNOT4	100	81.385	ENSLACG00000002647	CNOT4	99	81.385	Latimeria_chalumnae
ENSCAPG00000006213	CNOT4	100	93.015	ENSLOCG00000016126	cnot4a	92	93.015	Lepisosteus_oculatus
ENSCAPG00000006213	CNOT4	100	93.689	ENSLAFG00000000709	CNOT4	99	96.078	Loxodonta_africana
ENSCAPG00000006213	CNOT4	100	95.639	ENSMFAG00000046349	CNOT4	99	99.020	Macaca_fascicularis
ENSCAPG00000006213	CNOT4	100	95.639	ENSMMUG00000016181	CNOT4	99	99.020	Macaca_mulatta
ENSCAPG00000006213	CNOT4	100	95.091	ENSMNEG00000042164	CNOT4	99	99.020	Macaca_nemestrina
ENSCAPG00000006213	CNOT4	100	95.639	ENSMLEG00000032709	CNOT4	99	99.020	Mandrillus_leucophaeus
ENSCAPG00000006213	CNOT4	99	90.189	ENSMAMG00000023194	cnot4a	91	90.189	Mastacembelus_armatus
ENSCAPG00000006213	CNOT4	99	90.189	ENSMZEG00005007312	cnot4a	91	90.189	Maylandia_zebra
ENSCAPG00000006213	CNOT4	100	86.089	ENSMGAG00000011788	CNOT4	100	86.089	Meleagris_gallopavo
ENSCAPG00000006213	CNOT4	100	95.171	ENSMAUG00000020415	Cnot4	100	95.171	Mesocricetus_auratus
ENSCAPG00000006213	CNOT4	100	95.950	ENSMICG00000001667	CNOT4	99	99.020	Microcebus_murinus
ENSCAPG00000006213	CNOT4	100	95.327	ENSMOCG00000020955	Cnot4	99	98.039	Microtus_ochrogaster
ENSCAPG00000006213	CNOT4	96	71.337	ENSMMOG00000014565	cnot4a	97	72.546	Mola_mola
ENSCAPG00000006213	CNOT4	100	93.803	ENSMODG00000014068	CNOT4	100	93.803	Monodelphis_domestica
ENSCAPG00000006213	CNOT4	93	90.189	ENSMALG00000011662	cnot4a	80	90.189	Monopterus_albus
ENSCAPG00000006213	CNOT4	100	94.803	MGP_CAROLIEiJ_G0028217	Cnot4	100	94.803	Mus_caroli
ENSCAPG00000006213	CNOT4	100	94.930	ENSMUSG00000038784	Cnot4	100	94.930	Mus_musculus
ENSCAPG00000006213	CNOT4	100	94.930	MGP_PahariEiJ_G0021974	Cnot4	100	94.930	Mus_pahari
ENSCAPG00000006213	CNOT4	100	94.789	MGP_SPRETEiJ_G0029216	Cnot4	100	94.789	Mus_spretus
ENSCAPG00000006213	CNOT4	100	95.634	ENSMPUG00000004089	CNOT4	99	98.039	Mustela_putorius_furo
ENSCAPG00000006213	CNOT4	100	95.483	ENSMLUG00000008260	CNOT4	100	95.171	Myotis_lucifugus
ENSCAPG00000006213	CNOT4	100	95.070	ENSNGAG00000015030	Cnot4	100	95.070	Nannospalax_galili
ENSCAPG00000006213	CNOT4	100	68.872	ENSNBRG00000021144	cnot4a	100	68.722	Neolamprologus_brichardi
ENSCAPG00000006213	CNOT4	100	95.327	ENSNLEG00000013352	CNOT4	99	99.020	Nomascus_leucogenys
ENSCAPG00000006213	CNOT4	86	92.348	ENSOPRG00000001023	CNOT4	86	98.361	Ochotona_princeps
ENSCAPG00000006213	CNOT4	100	97.042	ENSODEG00000012975	CNOT4	100	97.042	Octodon_degus
ENSCAPG00000006213	CNOT4	99	90.189	ENSONIG00000008656	cnot4a	91	90.189	Oreochromis_niloticus
ENSCAPG00000006213	CNOT4	100	92.416	ENSOANG00000005006	CNOT4	100	92.416	Ornithorhynchus_anatinus
ENSCAPG00000006213	CNOT4	100	95.493	ENSOCUG00000013448	CNOT4	99	99.020	Oryctolagus_cuniculus
ENSCAPG00000006213	CNOT4	99	90.566	ENSORLG00000003727	cnot4a	91	90.566	Oryzias_latipes
ENSCAPG00000006213	CNOT4	99	90.943	ENSORLG00020015684	cnot4a	91	90.943	Oryzias_latipes_hni
ENSCAPG00000006213	CNOT4	99	90.943	ENSORLG00015008470	cnot4a	91	90.943	Oryzias_latipes_hsok
ENSCAPG00000006213	CNOT4	99	90.566	ENSOMEG00000011084	cnot4a	91	90.566	Oryzias_melastigma
ENSCAPG00000006213	CNOT4	100	95.231	ENSOGAG00000015499	CNOT4	100	95.231	Otolemur_garnettii
ENSCAPG00000006213	CNOT4	100	94.811	ENSOARG00000008803	CNOT4	99	96.078	Ovis_aries
ENSCAPG00000006213	CNOT4	100	95.327	ENSPPAG00000041937	CNOT4	100	95.327	Pan_paniscus
ENSCAPG00000006213	CNOT4	100	95.794	ENSPPRG00000023940	CNOT4	99	98.039	Panthera_pardus
ENSCAPG00000006213	CNOT4	100	95.352	ENSPTIG00000016601	CNOT4	99	97.059	Panthera_tigris_altaica
ENSCAPG00000006213	CNOT4	100	95.483	ENSPTRG00000019727	CNOT4	100	95.483	Pan_troglodytes
ENSCAPG00000006213	CNOT4	100	95.483	ENSPANG00000017724	CNOT4	99	99.020	Papio_anubis
ENSCAPG00000006213	CNOT4	100	70.543	ENSPKIG00000018137	cnot4a	100	70.233	Paramormyrops_kingsleyae
ENSCAPG00000006213	CNOT4	100	84.010	ENSPSIG00000011256	CNOT4	99	93.137	Pelodiscus_sinensis
ENSCAPG00000006213	CNOT4	100	71.235	ENSPMGG00000005671	cnot4a	100	71.084	Periophthalmus_magnuspinnatus
ENSCAPG00000006213	CNOT4	100	95.352	ENSPEMG00000021566	Cnot4	99	98.039	Peromyscus_maniculatus_bairdii
ENSCAPG00000006213	CNOT4	100	93.380	ENSPCIG00000029622	CNOT4	96	93.380	Phascolarctos_cinereus
ENSCAPG00000006213	CNOT4	99	90.189	ENSPFOG00000002228	cnot4a	91	90.189	Poecilia_formosa
ENSCAPG00000006213	CNOT4	99	90.189	ENSPLAG00000001780	cnot4a	91	90.189	Poecilia_latipinna
ENSCAPG00000006213	CNOT4	99	90.189	ENSPMEG00000006852	cnot4a	91	90.189	Poecilia_mexicana
ENSCAPG00000006213	CNOT4	99	90.189	ENSPREG00000008171	cnot4a	91	90.189	Poecilia_reticulata
ENSCAPG00000006213	CNOT4	100	95.352	ENSPPYG00000018026	CNOT4	99	97.059	Pongo_abelii
ENSCAPG00000006213	CNOT4	100	95.794	ENSPCOG00000019907	CNOT4	99	98.039	Propithecus_coquereli
ENSCAPG00000006213	CNOT4	97	93.043	ENSPVAG00000004905	CNOT4	88	93.006	Pteropus_vampyrus
ENSCAPG00000006213	CNOT4	99	90.189	ENSPNYG00000004276	cnot4a	91	90.189	Pundamilia_nyererei
ENSCAPG00000006213	CNOT4	100	74.256	ENSPNAG00000008679	cnot4b	100	72.917	Pygocentrus_nattereri
ENSCAPG00000006213	CNOT4	100	84.768	ENSPNAG00000020433	cnot4a	95	84.768	Pygocentrus_nattereri
ENSCAPG00000006213	CNOT4	100	94.789	ENSRNOG00000010795	Cnot4	100	94.789	Rattus_norvegicus
ENSCAPG00000006213	CNOT4	100	95.639	ENSRBIG00000043977	CNOT4	99	99.020	Rhinopithecus_bieti
ENSCAPG00000006213	CNOT4	100	95.493	ENSSBOG00000020808	CNOT4	99	97.059	Saimiri_boliviensis_boliviensis
ENSCAPG00000006213	CNOT4	100	93.521	ENSSHAG00000013639	CNOT4	100	93.521	Sarcophilus_harrisii
ENSCAPG00000006213	CNOT4	100	81.905	ENSSFOG00015017285	CNOT4	100	76.543	Scleropages_formosus
ENSCAPG00000006213	CNOT4	100	72.136	ENSSFOG00015002019	cnot4a	100	72.136	Scleropages_formosus
ENSCAPG00000006213	CNOT4	99	90.189	ENSSMAG00000008614	cnot4a	91	90.189	Scophthalmus_maximus
ENSCAPG00000006213	CNOT4	99	90.189	ENSSDUG00000022635	cnot4a	91	90.189	Seriola_dumerili
ENSCAPG00000006213	CNOT4	100	69.585	ENSSDUG00000018585	cnot4b	100	69.585	Seriola_dumerili
ENSCAPG00000006213	CNOT4	99	90.189	ENSSLDG00000015770	cnot4a	91	90.189	Seriola_lalandi_dorsalis
ENSCAPG00000006213	CNOT4	100	69.963	ENSSLDG00000014347	cnot4b	91	70.330	Seriola_lalandi_dorsalis
ENSCAPG00000006213	CNOT4	100	92.523	ENSSPUG00000004677	CNOT4	100	92.523	Sphenodon_punctatus
ENSCAPG00000006213	CNOT4	99	90.189	ENSSPAG00000012329	cnot4a	91	90.189	Stegastes_partitus
ENSCAPG00000006213	CNOT4	100	95.639	ENSSSCG00000021354	CNOT4	99	98.039	Sus_scrofa
ENSCAPG00000006213	CNOT4	100	85.958	ENSTGUG00000009161	CNOT4	100	85.958	Taeniopygia_guttata
ENSCAPG00000006213	CNOT4	100	82.178	ENSTRUG00000016861	cnot4a	100	69.925	Takifugu_rubripes
ENSCAPG00000006213	CNOT4	100	67.886	ENSTNIG00000016000	cnot4a	100	67.209	Tetraodon_nigroviridis
ENSCAPG00000006213	CNOT4	95	90.381	ENSTBEG00000002202	CNOT4	86	89.435	Tupaia_belangeri
ENSCAPG00000006213	CNOT4	95	93.659	ENSTTRG00000005122	CNOT4	88	94.651	Tursiops_truncatus
ENSCAPG00000006213	CNOT4	100	95.794	ENSUAMG00000026759	CNOT4	100	95.794	Ursus_americanus
ENSCAPG00000006213	CNOT4	99	95.768	ENSUMAG00000015351	CNOT4	94	97.959	Ursus_maritimus
ENSCAPG00000006213	CNOT4	100	95.171	ENSVVUG00000006200	CNOT4	99	98.039	Vulpes_vulpes
ENSCAPG00000006213	CNOT4	100	97.818	ENSXETG00000010594	cnot4	90	97.818	Xenopus_tropicalis
ENSCAPG00000006213	CNOT4	94	69.151	ENSXCOG00000020824	cnot4a	98	69.066	Xiphophorus_couchianus
ENSCAPG00000006213	CNOT4	99	90.189	ENSXMAG00000016984	cnot4a	91	90.189	Xiphophorus_maculatus