EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006275 (Gene tree)
Gene ID: -
Gene Symbol: RBM17
Alias: MGC14439|SPF45
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 14117 bases
Position: chrAVPZ01000078.1:17086467-17100583
Accession: 16944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003554	RRM_1	PF00076.22	3.8e-05	1	1
ENSCAPP00000003548	RRM_1	PF00076.22	4.2e-05	1	1
ENSCAPP00000003559	RRM_1	PF00076.22	4.3e-05	1	1
ENSCAPP00000003554	G-patch	PF01585.23	1.6e-13	1	1
ENSCAPP00000003548	G-patch	PF01585.23	1.7e-13	1	1
ENSCAPP00000003559	G-patch	PF01585.23	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007119	RBM17-203	1014	-	ENSCAPP00000003559	337 (aa)	-	-
ENSCAPT00000007108	RBM17-201	993	-	ENSCAPP00000003548	330 (aa)	-	-
ENSCAPT00000007114	RBM17-202	984	-	ENSCAPP00000003554	327 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006275	RBM17	100	79.235	ENSG00000134453	RBM17	97	81.466	Homo_sapiens
ENSCAPG00000006275	RBM17	99	67.302	ENSAPOG00000007101	rbm17	95	63.660	Acanthochromis_polyacanthus
ENSCAPG00000006275	RBM17	100	79.235	ENSAMEG00000002107	RBM17	96	75.844	Ailuropoda_melanoleuca
ENSCAPG00000006275	RBM17	100	67.297	ENSACIG00000006251	rbm17	96	63.776	Amphilophus_citrinellus
ENSCAPG00000006275	RBM17	100	67.575	ENSAOCG00000014892	rbm17	96	63.776	Amphiprion_ocellaris
ENSCAPG00000006275	RBM17	100	67.575	ENSAPEG00000022779	rbm17	96	63.776	Amphiprion_percula
ENSCAPG00000006275	RBM17	100	67.209	ENSATEG00000004406	rbm17	96	63.566	Anabas_testudineus
ENSCAPG00000006275	RBM17	100	77.596	ENSAPLG00000004190	RBM17	96	73.316	Anas_platyrhynchos
ENSCAPG00000006275	RBM17	99	73.854	ENSACAG00000005418	RBM17	99	74.933	Anolis_carolinensis
ENSCAPG00000006275	RBM17	100	72.113	ENSANAG00000019330	-	96	71.429	Aotus_nancymaae
ENSCAPG00000006275	RBM17	100	81.492	ENSANAG00000030127	RBM17	96	76.104	Aotus_nancymaae
ENSCAPG00000006275	RBM17	100	68.508	ENSACLG00000003928	rbm17	90	68.508	Astatotilapia_calliptera
ENSCAPG00000006275	RBM17	100	65.479	ENSAMXG00000005853	rbm17	96	60.494	Astyanax_mexicanus
ENSCAPG00000006275	RBM17	100	77.322	ENSBTAG00000011094	-	96	74.026	Bos_taurus
ENSCAPG00000006275	RBM17	100	78.689	ENSBTAG00000021951	RBM17	96	75.325	Bos_taurus
ENSCAPG00000006275	RBM17	81	32.234	WBGene00010233	F58B3.7	69	31.985	Caenorhabditis_elegans
ENSCAPG00000006275	RBM17	100	82.817	ENSCJAG00000020573	RBM17	96	78.342	Callithrix_jacchus
ENSCAPG00000006275	RBM17	100	79.235	ENSCAFG00000005206	RBM17	96	75.844	Canis_familiaris
ENSCAPG00000006275	RBM17	100	83.003	ENSCAFG00020005420	RBM17	96	78.495	Canis_lupus_dingo
ENSCAPG00000006275	RBM17	100	77.747	ENSCHIG00000019921	-	96	75.000	Capra_hircus
ENSCAPG00000006275	RBM17	100	84.150	ENSCHIG00000023204	-	96	79.508	Capra_hircus
ENSCAPG00000006275	RBM17	100	78.962	ENSTSYG00000001165	RBM17	75	96.629	Carlito_syrichta
ENSCAPG00000006275	RBM17	100	86.455	ENSCPOG00000005679	RBM17	96	80.811	Cavia_porcellus
ENSCAPG00000006275	RBM17	100	79.508	ENSCCAG00000018655	RBM17	96	76.104	Cebus_capucinus
ENSCAPG00000006275	RBM17	100	84.726	ENSCATG00000041566	RBM17	96	80.055	Cercocebus_atys
ENSCAPG00000006275	RBM17	100	80.601	ENSCLAG00000012195	RBM17	96	76.350	Chinchilla_lanigera
ENSCAPG00000006275	RBM17	100	79.235	ENSCSAG00000013564	RBM17	96	75.844	Chlorocebus_sabaeus
ENSCAPG00000006275	RBM17	79	64.865	ENSCHOG00000005131	RBM17	78	66.553	Choloepus_hoffmanni
ENSCAPG00000006275	RBM17	100	76.503	ENSCPBG00000019836	RBM17	96	72.280	Chrysemys_picta_bellii
ENSCAPG00000006275	RBM17	56	51.053	ENSCING00000004543	-	99	51.562	Ciona_intestinalis
ENSCAPG00000006275	RBM17	97	41.576	ENSCSAVG00000008782	-	95	37.221	Ciona_savignyi
ENSCAPG00000006275	RBM17	100	78.962	ENSCANG00000030987	RBM17	96	75.781	Colobus_angolensis_palliatus
ENSCAPG00000006275	RBM17	100	73.699	ENSCANG00000023715	-	98	66.757	Colobus_angolensis_palliatus
ENSCAPG00000006275	RBM17	100	67.622	ENSCGRG00001009256	-	88	67.751	Cricetulus_griseus_chok1gshd
ENSCAPG00000006275	RBM17	100	80.328	ENSCGRG00001013842	Rbm17	96	76.093	Cricetulus_griseus_chok1gshd
ENSCAPG00000006275	RBM17	100	80.328	ENSCGRG00000006907	Rbm17	96	76.093	Cricetulus_griseus_crigri
ENSCAPG00000006275	RBM17	100	68.817	ENSCSEG00000018164	rbm17	96	61.975	Cynoglossus_semilaevis
ENSCAPG00000006275	RBM17	100	64.167	ENSCVAG00000002476	rbm17	90	66.667	Cyprinodon_variegatus
ENSCAPG00000006275	RBM17	100	65.445	ENSDARG00000031346	rbm17	96	59.069	Danio_rerio
ENSCAPG00000006275	RBM17	100	78.962	ENSDNOG00000035920	RBM17	96	75.584	Dasypus_novemcinctus
ENSCAPG00000006275	RBM17	96	32.905	FBgn0086683	Spf45	99	33.333	Drosophila_melanogaster
ENSCAPG00000006275	RBM17	88	66.972	ENSETEG00000006642	RBM17	67	100.000	Echinops_telfairi
ENSCAPG00000006275	RBM17	61	54.630	ENSEBUG00000010253	rbm17	70	55.024	Eptatretus_burgeri
ENSCAPG00000006275	RBM17	100	85.303	ENSEASG00005019205	-	96	79.515	Equus_asinus_asinus
ENSCAPG00000006275	RBM17	100	77.808	ENSEASG00005009236	-	98	77.008	Equus_asinus_asinus
ENSCAPG00000006275	RBM17	100	75.145	ENSECAG00000008939	RBM17	89	76.488	Equus_caballus
ENSCAPG00000006275	RBM17	100	71.429	ENSECAG00000001379	-	96	71.858	Equus_caballus
ENSCAPG00000006275	RBM17	83	69.903	ENSEEUG00000013077	RBM17	96	68.421	Erinaceus_europaeus
ENSCAPG00000006275	RBM17	100	62.725	ENSELUG00000006440	rbm17	96	59.420	Esox_lucius
ENSCAPG00000006275	RBM17	100	79.235	ENSFCAG00000031988	RBM17	96	75.844	Felis_catus
ENSCAPG00000006275	RBM17	100	77.596	ENSFALG00000001790	RBM17	96	72.634	Ficedula_albicollis
ENSCAPG00000006275	RBM17	100	80.601	ENSFDAG00000007470	RBM17	96	76.350	Fukomys_damarensis
ENSCAPG00000006275	RBM17	100	70.455	ENSFHEG00000001266	rbm17	90	69.714	Fundulus_heteroclitus
ENSCAPG00000006275	RBM17	99	64.456	ENSGMOG00000008438	rbm17	96	58.955	Gadus_morhua
ENSCAPG00000006275	RBM17	100	77.322	ENSGALG00000006332	RBM17	96	73.247	Gallus_gallus
ENSCAPG00000006275	RBM17	100	68.524	ENSGAFG00000019879	rbm17	90	68.524	Gambusia_affinis
ENSCAPG00000006275	RBM17	99	66.757	ENSGACG00000019174	rbm17	96	61.440	Gasterosteus_aculeatus
ENSCAPG00000006275	RBM17	100	76.503	ENSGAGG00000019906	RBM17	96	72.280	Gopherus_agassizii
ENSCAPG00000006275	RBM17	100	68.508	ENSHBUG00000016624	rbm17	96	64.103	Haplochromis_burtoni
ENSCAPG00000006275	RBM17	100	80.601	ENSHGLG00000011580	RBM17	96	76.350	Heterocephalus_glaber_female
ENSCAPG00000006275	RBM17	100	80.601	ENSHGLG00100010460	RBM17	96	76.350	Heterocephalus_glaber_male
ENSCAPG00000006275	RBM17	100	68.588	ENSHGLG00100010556	-	93	66.859	Heterocephalus_glaber_male
ENSCAPG00000006275	RBM17	99	64.550	ENSHCOG00000010865	rbm17	96	58.561	Hippocampus_comes
ENSCAPG00000006275	RBM17	100	66.758	ENSIPUG00000007699	Rbm17	96	62.745	Ictalurus_punctatus
ENSCAPG00000006275	RBM17	100	80.328	ENSSTOG00000013591	RBM17	96	76.093	Ictidomys_tridecemlineatus
ENSCAPG00000006275	RBM17	100	80.328	ENSJJAG00000022886	Rbm17	96	76.093	Jaculus_jaculus
ENSCAPG00000006275	RBM17	100	64.286	ENSJJAG00000000993	-	92	62.099	Jaculus_jaculus
ENSCAPG00000006275	RBM17	100	68.785	ENSKMAG00000021400	rbm17	90	67.403	Kryptolebias_marmoratus
ENSCAPG00000006275	RBM17	100	68.564	ENSLBEG00000000881	rbm17	96	62.010	Labrus_bergylta
ENSCAPG00000006275	RBM17	99	52.073	ENSLACG00000017297	RBM17	90	52.332	Latimeria_chalumnae
ENSCAPG00000006275	RBM17	100	70.461	ENSLOCG00000015659	rbm17	90	70.461	Lepisosteus_oculatus
ENSCAPG00000006275	RBM17	100	79.781	ENSLAFG00000011629	RBM17	96	75.448	Loxodonta_africana
ENSCAPG00000006275	RBM17	100	84.726	ENSMFAG00000035521	RBM17	96	80.055	Macaca_fascicularis
ENSCAPG00000006275	RBM17	100	79.235	ENSMMUG00000015152	RBM17	97	81.897	Macaca_mulatta
ENSCAPG00000006275	RBM17	100	84.726	ENSMNEG00000017264	RBM17	96	80.055	Macaca_nemestrina
ENSCAPG00000006275	RBM17	100	84.726	ENSMLEG00000029340	RBM17	96	80.055	Mandrillus_leucophaeus
ENSCAPG00000006275	RBM17	100	64.146	ENSMAMG00000000387	rbm17	96	60.294	Mastacembelus_armatus
ENSCAPG00000006275	RBM17	100	68.508	ENSMZEG00005015179	rbm17	96	62.716	Maylandia_zebra
ENSCAPG00000006275	RBM17	100	77.174	ENSMGAG00000003981	RBM17	96	72.194	Meleagris_gallopavo
ENSCAPG00000006275	RBM17	100	80.328	ENSMAUG00000019247	Rbm17	96	76.093	Mesocricetus_auratus
ENSCAPG00000006275	RBM17	100	80.387	ENSMICG00000003976	-	96	76.115	Microcebus_murinus
ENSCAPG00000006275	RBM17	100	74.185	ENSMICG00000041489	-	96	69.720	Microcebus_murinus
ENSCAPG00000006275	RBM17	93	66.467	ENSMOCG00000014517	-	96	61.905	Microtus_ochrogaster
ENSCAPG00000006275	RBM17	100	80.328	ENSMOCG00000011847	Rbm17	96	76.093	Microtus_ochrogaster
ENSCAPG00000006275	RBM17	100	66.578	ENSMMOG00000010264	rbm17	90	66.759	Mola_mola
ENSCAPG00000006275	RBM17	100	78.415	ENSMODG00000016648	RBM17	96	75.065	Monodelphis_domestica
ENSCAPG00000006275	RBM17	100	69.972	ENSMALG00000010597	rbm17	96	66.133	Monopterus_albus
ENSCAPG00000006275	RBM17	100	79.781	MGP_CAROLIEiJ_G0023173	Rbm17	96	75.578	Mus_caroli
ENSCAPG00000006275	RBM17	100	79.781	ENSMUSG00000037197	Rbm17	96	75.578	Mus_musculus
ENSCAPG00000006275	RBM17	100	79.508	MGP_PahariEiJ_G0019233	Rbm17	96	75.321	Mus_pahari
ENSCAPG00000006275	RBM17	100	79.781	MGP_SPRETEiJ_G0024091	Rbm17	96	75.578	Mus_spretus
ENSCAPG00000006275	RBM17	84	74.920	ENSMPUG00000016359	RBM17	92	71.212	Mustela_putorius_furo
ENSCAPG00000006275	RBM17	100	77.112	ENSMLUG00000002302	-	96	73.077	Myotis_lucifugus
ENSCAPG00000006275	RBM17	100	74.044	ENSMLUG00000025709	-	97	67.959	Myotis_lucifugus
ENSCAPG00000006275	RBM17	100	57.101	ENSNGAG00000000663	-	88	58.859	Nannospalax_galili
ENSCAPG00000006275	RBM17	100	80.328	ENSNGAG00000000741	Rbm17	96	76.093	Nannospalax_galili
ENSCAPG00000006275	RBM17	99	68.678	ENSNBRG00000018148	rbm17	94	67.778	Neolamprologus_brichardi
ENSCAPG00000006275	RBM17	100	81.163	ENSNLEG00000033350	RBM17	96	75.844	Nomascus_leucogenys
ENSCAPG00000006275	RBM17	100	71.858	ENSMEUG00000011347	RBM17	96	68.831	Notamacropus_eugenii
ENSCAPG00000006275	RBM17	100	67.123	ENSOPRG00000002993	RBM17	96	62.532	Ochotona_princeps
ENSCAPG00000006275	RBM17	100	80.109	ENSODEG00000004393	RBM17	96	75.897	Octodon_degus
ENSCAPG00000006275	RBM17	100	64.873	ENSODEG00000007286	-	99	64.789	Octodon_degus
ENSCAPG00000006275	RBM17	100	66.307	ENSONIG00000011838	rbm17	96	63.613	Oreochromis_niloticus
ENSCAPG00000006275	RBM17	100	77.322	ENSOANG00000015455	RBM17	96	73.643	Ornithorhynchus_anatinus
ENSCAPG00000006275	RBM17	100	67.590	ENSORLG00000028798	rbm17	96	62.010	Oryzias_latipes
ENSCAPG00000006275	RBM17	100	69.602	ENSORLG00020004593	rbm17	96	67.380	Oryzias_latipes_hni
ENSCAPG00000006275	RBM17	100	67.209	ENSORLG00015000033	rbm17	96	63.683	Oryzias_latipes_hsok
ENSCAPG00000006275	RBM17	100	65.796	ENSOMEG00000012060	rbm17	100	78.146	Oryzias_melastigma
ENSCAPG00000006275	RBM17	100	79.235	ENSOGAG00000015687	RBM17	96	75.385	Otolemur_garnettii
ENSCAPG00000006275	RBM17	100	78.689	ENSOARG00000012975	RBM17	96	75.325	Ovis_aries
ENSCAPG00000006275	RBM17	100	80.274	ENSPPAG00000032347	RBM17	96	75.844	Pan_paniscus
ENSCAPG00000006275	RBM17	100	79.235	ENSPPRG00000010706	RBM17	96	75.844	Panthera_pardus
ENSCAPG00000006275	RBM17	100	79.235	ENSPTIG00000007596	RBM17	96	75.844	Panthera_tigris_altaica
ENSCAPG00000006275	RBM17	100	80.274	ENSPTRG00000002265	RBM17	96	75.844	Pan_troglodytes
ENSCAPG00000006275	RBM17	100	84.726	ENSPANG00000023425	RBM17	96	80.055	Papio_anubis
ENSCAPG00000006275	RBM17	100	68.378	ENSPKIG00000025526	rbm17	90	68.919	Paramormyrops_kingsleyae
ENSCAPG00000006275	RBM17	100	64.507	ENSPKIG00000005048	-	90	64.067	Paramormyrops_kingsleyae
ENSCAPG00000006275	RBM17	100	75.881	ENSPSIG00000012332	RBM17	96	71.722	Pelodiscus_sinensis
ENSCAPG00000006275	RBM17	100	67.302	ENSPMGG00000007980	rbm17	90	67.302	Periophthalmus_magnuspinnatus
ENSCAPG00000006275	RBM17	100	80.328	ENSPEMG00000014320	Rbm17	96	76.093	Peromyscus_maniculatus_bairdii
ENSCAPG00000006275	RBM17	100	78.689	ENSPCIG00000019260	-	90	78.729	Phascolarctos_cinereus
ENSCAPG00000006275	RBM17	100	65.535	ENSPFOG00000013271	rbm17	96	60.391	Poecilia_formosa
ENSCAPG00000006275	RBM17	100	66.573	ENSPLAG00000004455	rbm17	96	60.636	Poecilia_latipinna
ENSCAPG00000006275	RBM17	100	66.938	ENSPMEG00000014864	rbm17	96	62.148	Poecilia_mexicana
ENSCAPG00000006275	RBM17	100	68.908	ENSPREG00000015589	rbm17	90	68.908	Poecilia_reticulata
ENSCAPG00000006275	RBM17	100	79.235	ENSPPYG00000002067	RBM17	96	75.844	Pongo_abelii
ENSCAPG00000006275	RBM17	68	58.527	ENSPPYG00000019042	-	85	57.422	Pongo_abelii
ENSCAPG00000006275	RBM17	99	58.659	ENSPPYG00000019881	-	94	57.576	Pongo_abelii
ENSCAPG00000006275	RBM17	100	71.858	ENSPCAG00000016879	RBM17	96	69.845	Procavia_capensis
ENSCAPG00000006275	RBM17	100	82.022	ENSPCOG00000027881	RBM17	96	77.600	Propithecus_coquereli
ENSCAPG00000006275	RBM17	100	67.945	ENSPVAG00000015499	RBM17	96	63.351	Pteropus_vampyrus
ENSCAPG00000006275	RBM17	100	67.147	ENSPNYG00000015274	rbm17	89	67.147	Pundamilia_nyererei
ENSCAPG00000006275	RBM17	100	66.484	ENSPNAG00000030046	rbm17	90	70.055	Pygocentrus_nattereri
ENSCAPG00000006275	RBM17	100	80.328	ENSRNOG00000018767	Rbm17	96	76.093	Rattus_norvegicus
ENSCAPG00000006275	RBM17	100	81.163	ENSRBIG00000043727	RBM17	96	76.842	Rhinopithecus_bieti
ENSCAPG00000006275	RBM17	100	84.726	ENSRROG00000044142	RBM17	96	80.055	Rhinopithecus_roxellana
ENSCAPG00000006275	RBM17	100	82.535	ENSSBOG00000031661	-	96	78.075	Saimiri_boliviensis_boliviensis
ENSCAPG00000006275	RBM17	100	70.055	ENSSBOG00000023653	-	96	67.801	Saimiri_boliviensis_boliviensis
ENSCAPG00000006275	RBM17	100	78.962	ENSSHAG00000012480	-	96	75.065	Sarcophilus_harrisii
ENSCAPG00000006275	RBM17	100	64.286	ENSSFOG00015009892	rbm17	90	64.879	Scleropages_formosus
ENSCAPG00000006275	RBM17	100	68.091	ENSSMAG00000012368	rbm17	90	67.335	Scophthalmus_maximus
ENSCAPG00000006275	RBM17	100	71.875	ENSSDUG00000015015	rbm17	96	67.914	Seriola_dumerili
ENSCAPG00000006275	RBM17	100	71.875	ENSSLDG00000014486	rbm17	96	67.914	Seriola_lalandi_dorsalis
ENSCAPG00000006275	RBM17	55	63.229	ENSSARG00000001792	-	89	63.229	Sorex_araneus
ENSCAPG00000006275	RBM17	99	77.260	ENSSPUG00000001036	RBM17	96	72.727	Sphenodon_punctatus
ENSCAPG00000006275	RBM17	100	68.508	ENSSPAG00000002338	rbm17	96	63.939	Stegastes_partitus
ENSCAPG00000006275	RBM17	100	78.415	ENSSSCG00000011134	RBM17	96	75.065	Sus_scrofa
ENSCAPG00000006275	RBM17	100	78.142	ENSTGUG00000002013	RBM17	96	73.146	Taeniopygia_guttata
ENSCAPG00000006275	RBM17	100	68.464	ENSTRUG00000010698	rbm17	96	62.660	Takifugu_rubripes
ENSCAPG00000006275	RBM17	100	69.272	ENSTNIG00000006892	rbm17	96	63.104	Tetraodon_nigroviridis
ENSCAPG00000006275	RBM17	77	100.000	ENSTBEG00000014686	RBM17	70	100.000	Tupaia_belangeri
ENSCAPG00000006275	RBM17	100	78.689	ENSTTRG00000001344	RBM17	100	79.508	Tursiops_truncatus
ENSCAPG00000006275	RBM17	100	81.793	ENSUAMG00000009499	RBM17	96	77.394	Ursus_americanus
ENSCAPG00000006275	RBM17	100	84.438	ENSUMAG00000012237	RBM17	96	79.781	Ursus_maritimus
ENSCAPG00000006275	RBM17	100	70.000	ENSVPAG00000005497	RBM17	90	70.360	Vicugna_pacos
ENSCAPG00000006275	RBM17	100	83.003	ENSVVUG00000006780	RBM17	96	78.495	Vulpes_vulpes
ENSCAPG00000006275	RBM17	99	70.083	ENSXETG00000018123	rbm17	96	66.319	Xenopus_tropicalis
ENSCAPG00000006275	RBM17	100	67.622	ENSXMAG00000008674	rbm17	90	66.859	Xiphophorus_maculatus