EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAPG00000006284 (Gene tree)
Gene ID
-
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Plus strand
Length
2954 bases
Position
chrAVPZ01000556.1:17213790-17216743
Accession
6601
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000003544RNA_ligasePF09414.105.8e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000007104LIG4-2012718-ENSCAPP00000003544905 (aa)--
Gene Model
Click here to download ENSCAPG00000006284's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006284's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000006284LIG49988.372ENSG00000174405LIG410087.915Homo_sapiens
ENSCAPG00000006284LIG49964.895ENSAPOG00000000866lig49965.116Acanthochromis_polyacanthus
ENSCAPG00000006284LIG49987.154ENSAMEG00000019685LIG49987.154Ailuropoda_melanoleuca
ENSCAPG00000006284LIG49965.521ENSACIG00000018309lig49865.743Amphilophus_citrinellus
ENSCAPG00000006284LIG49964.784ENSAOCG00000011768lig49965.006Amphiprion_ocellaris
ENSCAPG00000006284LIG49964.895ENSAPEG00000017815lig49965.116Amphiprion_percula
ENSCAPG00000006284LIG49964.784ENSATEG00000005583lig49964.895Anabas_testudineus
ENSCAPG00000006284LIG49774.545ENSAPLG00000001673LIG49974.545Anas_platyrhynchos
ENSCAPG00000006284LIG49974.862ENSACAG00000014566LIG49974.862Anolis_carolinensis
ENSCAPG00000006284LIG49987.708ENSANAG00000012446LIG49987.708Aotus_nancymaae
ENSCAPG00000006284LIG49965.188ENSACLG00000027051lig49865.188Astatotilapia_calliptera
ENSCAPG00000006284LIG49965.265ENSAMXG00000008192lig49365.265Astyanax_mexicanus
ENSCAPG00000006284LIG49987.154ENSBTAG00000015868LIG49987.154Bos_taurus
ENSCAPG00000006284LIG49987.043ENSCJAG00000014689LIG49987.043Callithrix_jacchus
ENSCAPG00000006284LIG49987.818ENSCAFG00000006031LIG49987.818Canis_familiaris
ENSCAPG00000006284LIG49987.818ENSCAFG00020021230LIG49987.818Canis_lupus_dingo
ENSCAPG00000006284LIG49986.600ENSCHIG00000001019LIG49986.600Capra_hircus
ENSCAPG00000006284LIG49999.889ENSCPOG00000014266LIG49999.889Cavia_porcellus
ENSCAPG00000006284LIG49987.929ENSCCAG00000019971LIG49987.929Cebus_capucinus
ENSCAPG00000006284LIG49987.818ENSCATG00000021075LIG49987.818Cercocebus_atys
ENSCAPG00000006284LIG49993.577ENSCLAG00000003376LIG49993.577Chinchilla_lanigera
ENSCAPG00000006284LIG49987.818ENSCSAG00000000211LIG49987.818Chlorocebus_sabaeus
ENSCAPG00000006284LIG49977.901ENSCPBG00000023291LIG49977.901Chrysemys_picta_bellii
ENSCAPG00000006284LIG46947.134ENSCING00000009536-9547.134Ciona_intestinalis
ENSCAPG00000006284LIG48446.789ENSCSAVG00000010336-9846.789Ciona_savignyi
ENSCAPG00000006284LIG49987.818ENSCANG00000005805LIG49987.818Colobus_angolensis_palliatus
ENSCAPG00000006284LIG49986.062ENSCGRG00001012072Lig49986.062Cricetulus_griseus_chok1gshd
ENSCAPG00000006284LIG49986.062ENSCGRG00000013417Lig49986.062Cricetulus_griseus_crigri
ENSCAPG00000006284LIG49865.271ENSCSEG00000013905lig49565.271Cynoglossus_semilaevis
ENSCAPG00000006284LIG49964.895ENSCVAG00000007896lig49964.895Cyprinodon_variegatus
ENSCAPG00000006284LIG49964.191ENSDARG00000060620lig49864.191Danio_rerio
ENSCAPG00000006284LIG49986.394ENSDNOG00000000513LIG49986.394Dasypus_novemcinctus
ENSCAPG00000006284LIG410085.525ENSDORG00000027303Lig49985.525Dipodomys_ordii
ENSCAPG00000006284LIG49031.647FBgn0030506Lig49131.647Drosophila_melanogaster
ENSCAPG00000006284LIG49982.483ENSETEG00000015563LIG410082.816Echinops_telfairi
ENSCAPG00000006284LIG49943.644ENSEBUG00000014243lig49843.644Eptatretus_burgeri
ENSCAPG00000006284LIG49987.708ENSEASG00005022073LIG49987.708Equus_asinus_asinus
ENSCAPG00000006284LIG49987.265ENSECAG00000003257LIG49987.265Equus_caballus
ENSCAPG00000006284LIG49965.487ENSELUG00000006787lig49965.487Esox_lucius
ENSCAPG00000006284LIG49988.261ENSFCAG00000031985LIG49988.261Felis_catus
ENSCAPG00000006284LIG48876.250ENSFALG00000004214LIG49776.250Ficedula_albicollis
ENSCAPG00000006284LIG49991.362ENSFDAG00000008973LIG49991.362Fukomys_damarensis
ENSCAPG00000006284LIG49964.784ENSFHEG00000007398lig48964.895Fundulus_heteroclitus
ENSCAPG00000006284LIG48563.695ENSGMOG00000012843lig49963.695Gadus_morhua
ENSCAPG00000006284LIG49974.419ENSGALG00000016854LIG49974.419Gallus_gallus
ENSCAPG00000006284LIG49964.254ENSGAFG00000019779lig49564.412Gambusia_affinis
ENSCAPG00000006284LIG49963.344ENSGACG00000014135lig49963.455Gasterosteus_aculeatus
ENSCAPG00000006284LIG49988.261ENSGGOG00000027771LIG49988.261Gorilla_gorilla
ENSCAPG00000006284LIG49964.967ENSHBUG00000006245lig49864.967Haplochromis_burtoni
ENSCAPG00000006284LIG49991.362ENSHGLG00000000718LIG49991.362Heterocephalus_glaber_female
ENSCAPG00000006284LIG49991.362ENSHGLG00100003265LIG49991.362Heterocephalus_glaber_male
ENSCAPG00000006284LIG49964.609ENSHCOG00000012010lig49964.609Hippocampus_comes
ENSCAPG00000006284LIG49964.823ENSIPUG00000013748lig49964.823Ictalurus_punctatus
ENSCAPG00000006284LIG49987.818ENSSTOG00000024303LIG49987.818Ictidomys_tridecemlineatus
ENSCAPG00000006284LIG49985.161ENSJJAG00000006750Lig49985.161Jaculus_jaculus
ENSCAPG00000006284LIG49964.563ENSKMAG00000001149lig49964.563Kryptolebias_marmoratus
ENSCAPG00000006284LIG49265.745ENSLBEG00000014578lig410065.986Labrus_bergylta
ENSCAPG00000006284LIG49972.093ENSLACG00000003282LIG49972.093Latimeria_chalumnae
ENSCAPG00000006284LIG49969.868ENSLOCG00000008901lig49769.868Lepisosteus_oculatus
ENSCAPG00000006284LIG49984.862ENSLAFG00000031152LIG49984.862Loxodonta_africana
ENSCAPG00000006284LIG49987.597ENSMFAG00000037235LIG49987.597Macaca_fascicularis
ENSCAPG00000006284LIG49987.597ENSMMUG00000008874LIG49987.597Macaca_mulatta
ENSCAPG00000006284LIG49987.597ENSMNEG00000023575LIG49987.597Macaca_nemestrina
ENSCAPG00000006284LIG49987.818ENSMLEG00000026720LIG49987.818Mandrillus_leucophaeus
ENSCAPG00000006284LIG49965.006ENSMAMG00000008472lig49865.227Mastacembelus_armatus
ENSCAPG00000006284LIG49965.188ENSMZEG00005001855lig49865.188Maylandia_zebra
ENSCAPG00000006284LIG49974.972ENSMGAG00000015532LIG49974.972Meleagris_gallopavo
ENSCAPG00000006284LIG49984.607ENSMOCG00000019000Lig49984.607Microtus_ochrogaster
ENSCAPG00000006284LIG49964.009ENSMMOG00000004390lig49964.009Mola_mola
ENSCAPG00000006284LIG49981.506ENSMODG00000025064LIG49981.506Monodelphis_domestica
ENSCAPG00000006284LIG49964.895ENSMALG00000008555lig49964.895Monopterus_albus
ENSCAPG00000006284LIG49985.493MGP_CAROLIEiJ_G0030809Lig49985.493Mus_caroli
ENSCAPG00000006284LIG49985.825ENSMUSG00000049717Lig49985.825Mus_musculus
ENSCAPG00000006284LIG49985.493MGP_PahariEiJ_G0021270Lig49985.493Mus_pahari
ENSCAPG00000006284LIG49985.936MGP_SPRETEiJ_G0031917Lig49985.936Mus_spretus
ENSCAPG00000006284LIG49987.597ENSMPUG00000018675LIG49987.597Mustela_putorius_furo
ENSCAPG00000006284LIG49987.043ENSMLUG00000001267LIG49987.043Myotis_lucifugus
ENSCAPG00000006284LIG49985.493ENSNGAG00000013258Lig49985.493Nannospalax_galili
ENSCAPG00000006284LIG49965.188ENSNBRG00000021252lig49865.188Neolamprologus_brichardi
ENSCAPG00000006284LIG49988.594ENSNLEG00000007888LIG49988.594Nomascus_leucogenys
ENSCAPG00000006284LIG49985.271ENSOPRG00000005765LIG49985.271Ochotona_princeps
ENSCAPG00000006284LIG49992.248ENSODEG00000019683LIG49992.248Octodon_degus
ENSCAPG00000006284LIG49965.299ENSONIG00000011969lig49765.521Oreochromis_niloticus
ENSCAPG00000006284LIG49986.932ENSOCUG00000015734LIG49986.932Oryctolagus_cuniculus
ENSCAPG00000006284LIG49964.309ENSORLG00000004041lig49864.420Oryzias_latipes
ENSCAPG00000006284LIG49964.751ENSORLG00020019607lig49864.862Oryzias_latipes_hni
ENSCAPG00000006284LIG49964.199ENSORLG00015017754lig49864.309Oryzias_latipes_hsok
ENSCAPG00000006284LIG47570.074ENSOMEG00000003459lig49870.074Oryzias_melastigma
ENSCAPG00000006284LIG49986.726ENSOGAG00000032120LIG49986.726Otolemur_garnettii
ENSCAPG00000006284LIG48387.433ENSOARG00000005590LIG49987.433Ovis_aries
ENSCAPG00000006284LIG49988.151ENSPPAG00000032998LIG49988.151Pan_paniscus
ENSCAPG00000006284LIG49988.594ENSPPRG00000017804LIG49988.594Panthera_pardus
ENSCAPG00000006284LIG49988.483ENSPTIG00000010051LIG49988.483Panthera_tigris_altaica
ENSCAPG00000006284LIG49988.261ENSPTRG00000006025LIG49988.261Pan_troglodytes
ENSCAPG00000006284LIG49987.929ENSPANG00000007562LIG49987.929Papio_anubis
ENSCAPG00000006284LIG49965.376ENSPKIG00000011645lig49765.376Paramormyrops_kingsleyae
ENSCAPG00000006284LIG49977.630ENSPSIG00000001504LIG49977.630Pelodiscus_sinensis
ENSCAPG00000006284LIG49962.778ENSPMGG00000013486lig49862.721Periophthalmus_magnuspinnatus
ENSCAPG00000006284LIG49985.619ENSPEMG00000000076Lig49985.619Peromyscus_maniculatus_bairdii
ENSCAPG00000006284LIG49982.080ENSPCIG00000021882LIG49982.080Phascolarctos_cinereus
ENSCAPG00000006284LIG49964.294ENSPFOG00000000797lig49864.341Poecilia_formosa
ENSCAPG00000006284LIG49964.182ENSPLAG00000001196lig49864.230Poecilia_latipinna
ENSCAPG00000006284LIG49964.294ENSPMEG00000021353lig49864.452Poecilia_mexicana
ENSCAPG00000006284LIG49963.960ENSPREG00000007323lig49864.270Poecilia_reticulata
ENSCAPG00000006284LIG49987.929ENSPPYG00000005540LIG49987.929Pongo_abelii
ENSCAPG00000006284LIG49987.486ENSPVAG00000016403LIG49987.486Pteropus_vampyrus
ENSCAPG00000006284LIG49965.078ENSPNYG00000009660lig49865.078Pundamilia_nyererei
ENSCAPG00000006284LIG410064.128ENSPNAG00000028056lig49964.128Pygocentrus_nattereri
ENSCAPG00000006284LIG410064.128ENSPNAG00000028069LIG49964.128Pygocentrus_nattereri
ENSCAPG00000006284LIG49984.828ENSRNOG00000014605Lig49984.828Rattus_norvegicus
ENSCAPG00000006284LIG49986.600ENSRBIG00000039962LIG49986.600Rhinopithecus_bieti
ENSCAPG00000006284LIG49987.486ENSRROG00000006040LIG49987.486Rhinopithecus_roxellana
ENSCAPG00000006284LIG49987.597ENSSBOG00000019029LIG49987.597Saimiri_boliviensis_boliviensis
ENSCAPG00000006284LIG49978.295ENSSHAG00000009525LIG49978.761Sarcophilus_harrisii
ENSCAPG00000006284LIG49965.487ENSSFOG00015012835lig49965.487Scleropages_formosus
ENSCAPG00000006284LIG49962.237ENSSMAG00000011267lig49962.237Scophthalmus_maximus
ENSCAPG00000006284LIG49965.078ENSSDUG00000010343lig49865.078Seriola_dumerili
ENSCAPG00000006284LIG49963.566ENSSLDG00000003239lig49963.566Seriola_lalandi_dorsalis
ENSCAPG00000006284LIG49981.567ENSSARG00000006573LIG49981.567Sorex_araneus
ENSCAPG00000006284LIG49376.659ENSSPUG00000002444LIG410076.659Sphenodon_punctatus
ENSCAPG00000006284LIG49964.784ENSSPAG00000001609lig49964.784Stegastes_partitus
ENSCAPG00000006284LIG49985.271ENSSSCG00000009540LIG49985.271Sus_scrofa
ENSCAPG00000006284LIG49974.751ENSTGUG00000010795LIG49974.751Taeniopygia_guttata
ENSCAPG00000006284LIG49964.230ENSTRUG00000009984lig49964.230Takifugu_rubripes
ENSCAPG00000006284LIG49964.784ENSTNIG00000010348lig49965.006Tetraodon_nigroviridis
ENSCAPG00000006284LIG49987.375ENSTBEG00000017741LIG49987.375Tupaia_belangeri
ENSCAPG00000006284LIG49987.708ENSTTRG00000012660LIG49987.708Tursiops_truncatus
ENSCAPG00000006284LIG49987.375ENSUAMG00000003773LIG49987.375Ursus_americanus
ENSCAPG00000006284LIG49970.986ENSXETG00000002654lig49970.986Xenopus_tropicalis
ENSCAPG00000006284LIG49964.071ENSXCOG00000017401lig49864.009Xiphophorus_couchianus
ENSCAPG00000006284LIG49964.444ENSXMAG00000015142lig49864.381Xiphophorus_maculatus

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