EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000006394 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 16014 bases
Position: chrAVPZ01000234.1:10412602-10428615
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003698	RRM_1	PF00076.22	3.6e-07	1	1
ENSCAPP00000003698	eIF2A	PF08662.11	2.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007263	-	1839	-	ENSCAPP00000003698	612 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000006394	-	99	85.668	ENSCAPG00000009347	-	94	85.668

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006394	-	99	86.762	ENSG00000106263	EIF3B	76	98.276	Homo_sapiens
ENSCAPG00000006394	-	96	78.818	ENSAPOG00000002297	eif3bb	91	77.440	Acanthochromis_polyacanthus
ENSCAPG00000006394	-	96	79.146	ENSACIG00000015396	eif3bb	91	77.760	Amphilophus_citrinellus
ENSCAPG00000006394	-	96	78.982	ENSAOCG00000010921	eif3bb	91	77.600	Amphiprion_ocellaris
ENSCAPG00000006394	-	96	78.982	ENSAPEG00000000844	eif3bb	91	77.600	Amphiprion_percula
ENSCAPG00000006394	-	97	78.339	ENSATEG00000008626	eif3bb	91	77.440	Anabas_testudineus
ENSCAPG00000006394	-	99	81.369	ENSAPLG00000016062	EIF3B	96	81.369	Anas_platyrhynchos
ENSCAPG00000006394	-	98	80.998	ENSACAG00000008874	-	69	80.998	Anolis_carolinensis
ENSCAPG00000006394	-	99	86.762	ENSANAG00000020360	EIF3B	77	86.762	Aotus_nancymaae
ENSCAPG00000006394	-	96	78.489	ENSACLG00000000870	eif3bb	91	77.120	Astatotilapia_calliptera
ENSCAPG00000006394	-	97	77.651	ENSAMXG00000009773	eif3ba	91	76.923	Astyanax_mexicanus
ENSCAPG00000006394	-	99	85.805	ENSBTAG00000007474	EIF3B	79	85.805	Bos_taurus
ENSCAPG00000006394	-	99	32.440	WBGene00001225	eif-3.B	92	32.440	Caenorhabditis_elegans
ENSCAPG00000006394	-	99	86.603	ENSCJAG00000001442	EIF3B	77	86.603	Callithrix_jacchus
ENSCAPG00000006394	-	99	85.965	ENSCAFG00000016418	EIF3B	77	85.965	Canis_familiaris
ENSCAPG00000006394	-	99	82.456	ENSCAFG00020020771	EIF3B	79	82.456	Canis_lupus_dingo
ENSCAPG00000006394	-	99	85.646	ENSCHIG00000009941	EIF3B	79	85.646	Capra_hircus
ENSCAPG00000006394	-	99	84.873	ENSTSYG00000008256	EIF3B	92	84.873	Carlito_syrichta
ENSCAPG00000006394	-	99	87.400	ENSCPOG00000012541	-	79	87.400	Cavia_porcellus
ENSCAPG00000006394	-	99	86.922	ENSCPOG00000031410	-	79	86.922	Cavia_porcellus
ENSCAPG00000006394	-	99	86.762	ENSCCAG00000021556	EIF3B	96	88.245	Cebus_capucinus
ENSCAPG00000006394	-	99	86.762	ENSCATG00000040107	EIF3B	77	86.762	Cercocebus_atys
ENSCAPG00000006394	-	99	87.400	ENSCLAG00000006140	EIF3B	79	87.400	Chinchilla_lanigera
ENSCAPG00000006394	-	96	85.878	ENSCSAG00000017603	EIF3B	75	85.878	Chlorocebus_sabaeus
ENSCAPG00000006394	-	53	95.604	ENSCHOG00000006142	-	57	95.604	Choloepus_hoffmanni
ENSCAPG00000006394	-	99	81.629	ENSCPBG00000020654	EIF3B	80	81.629	Chrysemys_picta_bellii
ENSCAPG00000006394	-	94	54.167	ENSCING00000003620	-	90	53.006	Ciona_intestinalis
ENSCAPG00000006394	-	99	86.762	ENSCANG00000042097	EIF3B	90	86.762	Colobus_angolensis_palliatus
ENSCAPG00000006394	-	99	85.805	ENSCGRG00001019278	Eif3b	78	85.805	Cricetulus_griseus_chok1gshd
ENSCAPG00000006394	-	99	85.805	ENSCGRG00000004618	Eif3b	78	85.805	Cricetulus_griseus_crigri
ENSCAPG00000006394	-	96	78.161	ENSCSEG00000020931	eif3bb	91	76.800	Cynoglossus_semilaevis
ENSCAPG00000006394	-	96	78.818	ENSCVAG00000015650	eif3bb	91	77.440	Cyprinodon_variegatus
ENSCAPG00000006394	-	97	76.596	ENSDARG00000074213	eif3bb	96	73.046	Danio_rerio
ENSCAPG00000006394	-	99	76.763	ENSDARG00000059654	eif3ba	91	76.763	Danio_rerio
ENSCAPG00000006394	-	99	85.965	ENSDNOG00000049572	EIF3B	76	85.965	Dasypus_novemcinctus
ENSCAPG00000006394	-	99	81.891	ENSDORG00000001401	Eif3b	78	81.891	Dipodomys_ordii
ENSCAPG00000006394	-	96	47.650	FBgn0034237	eIF3b	88	47.650	Drosophila_melanogaster
ENSCAPG00000006394	-	98	82.609	ENSETEG00000001719	EIF3B	95	82.609	Echinops_telfairi
ENSCAPG00000006394	-	95	67.221	ENSEBUG00000004379	eif3bb	89	66.290	Eptatretus_burgeri
ENSCAPG00000006394	-	99	86.443	ENSEASG00005021167	EIF3B	78	86.443	Equus_asinus_asinus
ENSCAPG00000006394	-	99	86.443	ENSECAG00000013671	EIF3B	78	86.443	Equus_caballus
ENSCAPG00000006394	-	76	96.809	ENSEEUG00000014359	EIF3B	72	96.809	Erinaceus_europaeus
ENSCAPG00000006394	-	98	76.592	ENSELUG00000021762	eif3bb	91	76.592	Esox_lucius
ENSCAPG00000006394	-	99	85.805	ENSFCAG00000005392	EIF3B	77	85.805	Felis_catus
ENSCAPG00000006394	-	99	81.529	ENSFALG00000013907	EIF3B	87	81.529	Ficedula_albicollis
ENSCAPG00000006394	-	99	87.241	ENSFDAG00000007558	EIF3B	80	87.241	Fukomys_damarensis
ENSCAPG00000006394	-	96	78.982	ENSFHEG00000002563	eif3bb	91	77.885	Fundulus_heteroclitus
ENSCAPG00000006394	-	97	74.595	ENSGMOG00000006100	eif3bb	91	73.492	Gadus_morhua
ENSCAPG00000006394	-	99	81.210	ENSGALG00000040999	EIF3B	77	81.210	Gallus_gallus
ENSCAPG00000006394	-	51	86.792	ENSGAFG00000004114	eif3bb	76	86.792	Gambusia_affinis
ENSCAPG00000006394	-	96	77.236	ENSGACG00000016738	eif3bb	91	75.633	Gasterosteus_aculeatus
ENSCAPG00000006394	-	99	81.949	ENSGAGG00000003659	EIF3B	78	81.949	Gopherus_agassizii
ENSCAPG00000006394	-	76	83.027	ENSGGOG00000016291	EIF3B	73	83.027	Gorilla_gorilla
ENSCAPG00000006394	-	96	78.489	ENSHBUG00000019329	eif3bb	91	77.120	Haplochromis_burtoni
ENSCAPG00000006394	-	99	86.603	ENSHGLG00000015253	EIF3B	79	86.603	Heterocephalus_glaber_female
ENSCAPG00000006394	-	99	86.603	ENSHGLG00100015005	EIF3B	80	86.603	Heterocephalus_glaber_male
ENSCAPG00000006394	-	96	78.618	ENSHCOG00000020583	eif3bb	91	77.244	Hippocampus_comes
ENSCAPG00000006394	-	96	79.441	ENSIPUG00000018347	eif3b	91	78.205	Ictalurus_punctatus
ENSCAPG00000006394	-	99	86.124	ENSSTOG00000021545	EIF3B	87	86.124	Ictidomys_tridecemlineatus
ENSCAPG00000006394	-	99	85.965	ENSJJAG00000014658	Eif3b	79	85.965	Jaculus_jaculus
ENSCAPG00000006394	-	99	76.800	ENSKMAG00000007432	eif3bb	92	76.800	Kryptolebias_marmoratus
ENSCAPG00000006394	-	96	79.276	ENSLBEG00000005233	eif3bb	91	77.885	Labrus_bergylta
ENSCAPG00000006394	-	97	81.656	ENSLACG00000010357	EIF3B	91	80.861	Latimeria_chalumnae
ENSCAPG00000006394	-	99	79.840	ENSLOCG00000004215	eif3bb	91	79.840	Lepisosteus_oculatus
ENSCAPG00000006394	-	99	85.669	ENSLAFG00000001540	EIF3B	80	85.669	Loxodonta_africana
ENSCAPG00000006394	-	99	86.762	ENSMFAG00000046100	EIF3B	80	86.762	Macaca_fascicularis
ENSCAPG00000006394	-	99	86.212	ENSMMUG00000015529	EIF3B	77	86.212	Macaca_mulatta
ENSCAPG00000006394	-	99	86.762	ENSMNEG00000042021	EIF3B	76	86.762	Macaca_nemestrina
ENSCAPG00000006394	-	99	86.762	ENSMLEG00000042295	EIF3B	93	86.762	Mandrillus_leucophaeus
ENSCAPG00000006394	-	97	78.827	ENSMAMG00000008654	eif3bb	91	77.920	Mastacembelus_armatus
ENSCAPG00000006394	-	96	78.489	ENSMZEG00005011827	eif3bb	91	77.120	Maylandia_zebra
ENSCAPG00000006394	-	99	81.369	ENSMGAG00000002719	EIF3B	96	81.369	Meleagris_gallopavo
ENSCAPG00000006394	-	99	85.805	ENSMAUG00000020259	Eif3b	79	85.805	Mesocricetus_auratus
ENSCAPG00000006394	-	99	86.922	ENSMICG00000010103	EIF3B	77	86.922	Microcebus_murinus
ENSCAPG00000006394	-	99	85.965	ENSMOCG00000000390	Eif3b	78	85.965	Microtus_ochrogaster
ENSCAPG00000006394	-	96	79.605	ENSMMOG00000003655	eif3bb	91	78.205	Mola_mola
ENSCAPG00000006394	-	99	85.965	ENSMODG00000009778	EIF3B	75	85.965	Monodelphis_domestica
ENSCAPG00000006394	-	99	70.283	ENSMALG00000002494	eif3bb	92	70.283	Monopterus_albus
ENSCAPG00000006394	-	99	85.646	MGP_CAROLIEiJ_G0027948	Eif3b	100	96.552	Mus_caroli
ENSCAPG00000006394	-	99	85.646	ENSMUSG00000056076	Eif3b	99	96.552	Mus_musculus
ENSCAPG00000006394	-	99	85.805	MGP_PahariEiJ_G0024520	Eif3b	100	96.552	Mus_pahari
ENSCAPG00000006394	-	99	85.646	MGP_SPRETEiJ_G0028952	Eif3b	100	96.552	Mus_spretus
ENSCAPG00000006394	-	99	85.805	ENSMPUG00000017919	EIF3B	94	85.805	Mustela_putorius_furo
ENSCAPG00000006394	-	99	85.056	ENSMLUG00000013740	EIF3B	91	85.056	Myotis_lucifugus
ENSCAPG00000006394	-	99	85.965	ENSNGAG00000016188	Eif3b	79	85.965	Nannospalax_galili
ENSCAPG00000006394	-	87	82.374	ENSNBRG00000008582	eif3bb	89	82.374	Neolamprologus_brichardi
ENSCAPG00000006394	-	99	77.033	ENSNLEG00000008647	EIF3B	77	77.033	Nomascus_leucogenys
ENSCAPG00000006394	-	80	88.727	ENSMEUG00000000880	EIF3B	70	88.727	Notamacropus_eugenii
ENSCAPG00000006394	-	98	83.226	ENSOPRG00000014504	EIF3B	95	83.226	Ochotona_princeps
ENSCAPG00000006394	-	99	77.655	ENSODEG00000012851	EIF3B	77	77.655	Octodon_degus
ENSCAPG00000006394	-	97	78.502	ENSONIG00000003283	eif3bb	91	77.600	Oreochromis_niloticus
ENSCAPG00000006394	-	96	86.942	ENSOANG00000004314	EIF3B	99	86.942	Ornithorhynchus_anatinus
ENSCAPG00000006394	-	99	86.400	ENSOCUG00000010289	EIF3B	92	86.400	Oryctolagus_cuniculus
ENSCAPG00000006394	-	96	78.161	ENSORLG00000008861	eif3bb	91	76.800	Oryzias_latipes
ENSCAPG00000006394	-	96	78.161	ENSORLG00020012732	eif3bb	91	76.800	Oryzias_latipes_hni
ENSCAPG00000006394	-	96	78.161	ENSORLG00015000357	eif3bb	91	76.800	Oryzias_latipes_hsok
ENSCAPG00000006394	-	96	77.430	ENSOMEG00000017895	eif3bb	91	76.083	Oryzias_melastigma
ENSCAPG00000006394	-	99	80.472	ENSOGAG00000006319	EIF3B	85	80.472	Otolemur_garnettii
ENSCAPG00000006394	-	99	78.730	ENSOARG00000005137	EIF3B	89	78.730	Ovis_aries
ENSCAPG00000006394	-	99	86.762	ENSPPAG00000032833	EIF3B	88	86.762	Pan_paniscus
ENSCAPG00000006394	-	99	85.805	ENSPPRG00000003071	EIF3B	79	85.805	Panthera_pardus
ENSCAPG00000006394	-	99	85.805	ENSPTIG00000013328	EIF3B	80	85.805	Panthera_tigris_altaica
ENSCAPG00000006394	-	99	86.762	ENSPTRG00000018860	EIF3B	80	86.762	Pan_troglodytes
ENSCAPG00000006394	-	99	86.762	ENSPTRG00000046041	-	80	86.762	Pan_troglodytes
ENSCAPG00000006394	-	99	86.762	ENSPANG00000014557	EIF3B	80	86.762	Papio_anubis
ENSCAPG00000006394	-	99	78.240	ENSPKIG00000009981	eif3ba	94	78.240	Paramormyrops_kingsleyae
ENSCAPG00000006394	-	99	78.205	ENSPKIG00000011735	eif3bb	91	78.205	Paramormyrops_kingsleyae
ENSCAPG00000006394	-	99	81.949	ENSPSIG00000009889	EIF3B	86	81.949	Pelodiscus_sinensis
ENSCAPG00000006394	-	99	77.600	ENSPMGG00000016466	eif3bb	92	77.600	Periophthalmus_magnuspinnatus
ENSCAPG00000006394	-	99	85.646	ENSPEMG00000021554	Eif3b	78	85.646	Peromyscus_maniculatus_bairdii
ENSCAPG00000006394	-	90	68.056	ENSPMAG00000005331	eif3bb	89	68.056	Petromyzon_marinus
ENSCAPG00000006394	-	99	85.805	ENSPCIG00000009464	EIF3B	94	85.805	Phascolarctos_cinereus
ENSCAPG00000006394	-	96	79.475	ENSPFOG00000001449	eif3bb	91	78.080	Poecilia_formosa
ENSCAPG00000006394	-	96	75.209	ENSPLAG00000005120	eif3bb	91	73.899	Poecilia_latipinna
ENSCAPG00000006394	-	96	79.475	ENSPMEG00000015157	eif3bb	92	78.080	Poecilia_mexicana
ENSCAPG00000006394	-	96	79.475	ENSPREG00000006422	eif3bb	91	78.080	Poecilia_reticulata
ENSCAPG00000006394	-	98	86.656	ENSPPYG00000017313	EIF3B	71	86.656	Pongo_abelii
ENSCAPG00000006394	-	67	96.992	ENSPCAG00000010455	-	70	96.992	Procavia_capensis
ENSCAPG00000006394	-	99	86.922	ENSPCOG00000025894	EIF3B	76	86.922	Propithecus_coquereli
ENSCAPG00000006394	-	98	85.048	ENSPVAG00000013735	EIF3B	88	85.048	Pteropus_vampyrus
ENSCAPG00000006394	-	97	62.787	ENSPNYG00000014859	eif3bb	91	62.158	Pundamilia_nyererei
ENSCAPG00000006394	-	99	77.724	ENSPNAG00000021677	eif3ba	91	77.724	Pygocentrus_nattereri
ENSCAPG00000006394	-	99	85.646	ENSRNOG00000001253	Eif3b	78	85.646	Rattus_norvegicus
ENSCAPG00000006394	-	99	86.762	ENSRBIG00000030590	EIF3B	91	86.762	Rhinopithecus_bieti
ENSCAPG00000006394	-	99	86.762	ENSRROG00000035023	EIF3B	80	86.762	Rhinopithecus_roxellana
ENSCAPG00000006394	-	99	86.762	ENSSBOG00000001954	EIF3B	79	86.762	Saimiri_boliviensis_boliviensis
ENSCAPG00000006394	-	99	85.805	ENSSHAG00000001063	EIF3B	75	85.805	Sarcophilus_harrisii
ENSCAPG00000006394	-	99	78.880	ENSSFOG00015006390	eif3bb	91	78.880	Scleropages_formosus
ENSCAPG00000006394	-	99	79.006	ENSSFOG00015005824	eif3ba	91	79.006	Scleropages_formosus
ENSCAPG00000006394	-	96	78.289	ENSSMAG00000021264	eif3bb	91	76.923	Scophthalmus_maximus
ENSCAPG00000006394	-	96	78.982	ENSSDUG00000016761	eif3bb	91	77.600	Seriola_dumerili
ENSCAPG00000006394	-	96	78.982	ENSSLDG00000022874	eif3bb	91	77.600	Seriola_lalandi_dorsalis
ENSCAPG00000006394	-	98	85.370	ENSSARG00000006036	EIF3B	95	85.370	Sorex_araneus
ENSCAPG00000006394	-	99	81.499	ENSSPUG00000001870	EIF3B	96	81.499	Sphenodon_punctatus
ENSCAPG00000006394	-	96	78.982	ENSSPAG00000013403	eif3bb	91	77.600	Stegastes_partitus
ENSCAPG00000006394	-	99	85.805	ENSSSCG00000039390	EIF3B	79	85.805	Sus_scrofa
ENSCAPG00000006394	-	99	80.507	ENSTGUG00000008140	EIF3B	94	80.507	Taeniopygia_guttata
ENSCAPG00000006394	-	96	78.618	ENSTRUG00000011064	eif3bb	91	77.244	Takifugu_rubripes
ENSCAPG00000006394	-	96	78.618	ENSTNIG00000004648	eif3bb	93	77.244	Tetraodon_nigroviridis
ENSCAPG00000006394	-	98	74.038	ENSTBEG00000012836	EIF3B	71	74.038	Tupaia_belangeri
ENSCAPG00000006394	-	98	77.492	ENSTTRG00000014713	EIF3B	73	77.492	Tursiops_truncatus
ENSCAPG00000006394	-	99	85.805	ENSUAMG00000000800	EIF3B	95	85.805	Ursus_americanus
ENSCAPG00000006394	-	99	85.805	ENSUMAG00000007200	EIF3B	99	85.805	Ursus_maritimus
ENSCAPG00000006394	-	99	85.805	ENSVVUG00000004280	EIF3B	99	85.805	Vulpes_vulpes
ENSCAPG00000006394	-	96	80.757	ENSXETG00000020593	eif3b	92	79.487	Xenopus_tropicalis
ENSCAPG00000006394	-	96	78.913	ENSXCOG00000008279	eif3bb	91	77.528	Xiphophorus_couchianus
ENSCAPG00000006394	-	96	79.077	ENSXMAG00000004705	eif3bb	91	77.689	Xiphophorus_maculatus