EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006421 (Gene tree)
Gene ID: -
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 4552 bases
Position: chrAVPZ01000153.1:512645-517196
Accession: 15508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003722	PseudoU_synth_1	PF01416.20	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007287	PUS1-201	969	-	ENSCAPP00000003722	322 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006421	PUS1	63	30.263	ENSG00000169972	PUSL1	75	30.263	Homo_sapiens
ENSCAPG00000006421	PUS1	100	88.272	ENSG00000177192	PUS1	80	91.611	Homo_sapiens
ENSCAPG00000006421	PUS1	100	68.111	ENSAPOG00000007254	pus1	71	70.903	Acanthochromis_polyacanthus
ENSCAPG00000006421	PUS1	99	86.250	ENSAMEG00000013715	PUS1	73	89.262	Ailuropoda_melanoleuca
ENSCAPG00000006421	PUS1	96	70.418	ENSACIG00000009169	pus1	73	71.906	Amphilophus_citrinellus
ENSCAPG00000006421	PUS1	100	69.040	ENSAOCG00000022207	pus1	71	72.575	Amphiprion_ocellaris
ENSCAPG00000006421	PUS1	100	69.040	ENSAPEG00000006039	pus1	76	72.575	Amphiprion_percula
ENSCAPG00000006421	PUS1	100	68.421	ENSATEG00000020688	pus1	76	71.572	Anabas_testudineus
ENSCAPG00000006421	PUS1	94	78.808	ENSACAG00000007367	PUS1	80	79.195	Anolis_carolinensis
ENSCAPG00000006421	PUS1	100	88.272	ENSANAG00000036192	PUS1	91	91.611	Aotus_nancymaae
ENSCAPG00000006421	PUS1	94	71.711	ENSACLG00000020868	pus1	77	72.241	Astatotilapia_calliptera
ENSCAPG00000006421	PUS1	99	70.625	ENSAMXG00000008710	pus1	69	73.826	Astyanax_mexicanus
ENSCAPG00000006421	PUS1	99	87.500	ENSBTAG00000012990	PUS1	75	89.933	Bos_taurus
ENSCAPG00000006421	PUS1	92	39.871	WBGene00004248	pus-1	72	39.404	Caenorhabditis_elegans
ENSCAPG00000006421	PUS1	79	89.764	ENSCJAG00000003720	PUS1	69	89.723	Callithrix_jacchus
ENSCAPG00000006421	PUS1	99	86.250	ENSCAFG00000006429	PUS1	75	89.597	Canis_familiaris
ENSCAPG00000006421	PUS1	99	86.250	ENSCAFG00020010737	PUS1	69	89.597	Canis_lupus_dingo
ENSCAPG00000006421	PUS1	99	87.500	ENSCHIG00000000487	PUS1	75	89.933	Capra_hircus
ENSCAPG00000006421	PUS1	100	88.272	ENSTSYG00000032605	PUS1	85	91.611	Carlito_syrichta
ENSCAPG00000006421	PUS1	100	98.171	ENSCPOG00000001027	PUS1	81	99.639	Cavia_porcellus
ENSCAPG00000006421	PUS1	100	87.963	ENSCCAG00000015879	PUS1	83	91.611	Cebus_capucinus
ENSCAPG00000006421	PUS1	100	88.889	ENSCATG00000032870	PUS1	82	92.282	Cercocebus_atys
ENSCAPG00000006421	PUS1	100	94.817	ENSCLAG00000011689	PUS1	82	93.993	Chinchilla_lanigera
ENSCAPG00000006421	PUS1	100	88.889	ENSCSAG00000001879	PUS1	70	92.617	Chlorocebus_sabaeus
ENSCAPG00000006421	PUS1	94	82.119	ENSCPBG00000024715	PUS1	91	78.882	Chrysemys_picta_bellii
ENSCAPG00000006421	PUS1	99	42.368	ENSCING00000009426	-	79	44.108	Ciona_intestinalis
ENSCAPG00000006421	PUS1	93	43.189	ENSCSAVG00000003751	-	61	43.771	Ciona_savignyi
ENSCAPG00000006421	PUS1	100	80.428	ENSCANG00000035561	PUS1	82	83.056	Colobus_angolensis_palliatus
ENSCAPG00000006421	PUS1	100	88.889	ENSCGRG00001019592	Pus1	80	87.455	Cricetulus_griseus_chok1gshd
ENSCAPG00000006421	PUS1	100	88.889	ENSCGRG00000004048	Pus1	82	88.580	Cricetulus_griseus_crigri
ENSCAPG00000006421	PUS1	93	69.868	ENSCSEG00000003629	pus1	71	70.234	Cynoglossus_semilaevis
ENSCAPG00000006421	PUS1	93	72.848	ENSCVAG00000001265	pus1	72	72.910	Cyprinodon_variegatus
ENSCAPG00000006421	PUS1	99	66.250	ENSDARG00000045562	pus1	93	68.846	Danio_rerio
ENSCAPG00000006421	PUS1	97	85.209	ENSDNOG00000045576	PUS1	91	86.913	Dasypus_novemcinctus
ENSCAPG00000006421	PUS1	100	90.741	ENSDORG00000011455	Pus1	99	90.123	Dipodomys_ordii
ENSCAPG00000006421	PUS1	100	47.401	FBgn0038811	PUS1	72	49.338	Drosophila_melanogaster
ENSCAPG00000006421	PUS1	93	85.235	ENSETEG00000019160	PUS1	73	85.235	Echinops_telfairi
ENSCAPG00000006421	PUS1	93	42.679	ENSEBUG00000000368	-	59	42.679	Eptatretus_burgeri
ENSCAPG00000006421	PUS1	100	89.130	ENSEASG00005016535	PUS1	74	88.199	Equus_asinus_asinus
ENSCAPG00000006421	PUS1	100	89.130	ENSECAG00000006965	PUS1	80	88.509	Equus_caballus
ENSCAPG00000006421	PUS1	99	69.659	ENSELUG00000010424	pus1	76	72.575	Esox_lucius
ENSCAPG00000006421	PUS1	99	85.000	ENSFCAG00000010780	PUS1	70	87.919	Felis_catus
ENSCAPG00000006421	PUS1	100	75.988	ENSFALG00000008273	PUS1	70	81.879	Ficedula_albicollis
ENSCAPG00000006421	PUS1	100	92.260	ENSFDAG00000012518	PUS1	79	92.260	Fukomys_damarensis
ENSCAPG00000006421	PUS1	96	69.775	ENSFHEG00000010504	pus1	72	71.572	Fundulus_heteroclitus
ENSCAPG00000006421	PUS1	94	68.317	ENSGMOG00000008143	pus1	77	68.562	Gadus_morhua
ENSCAPG00000006421	PUS1	100	77.134	ENSGALG00000002354	PUS1	73	82.886	Gallus_gallus
ENSCAPG00000006421	PUS1	99	68.519	ENSGAFG00000006578	pus1	72	72.241	Gambusia_affinis
ENSCAPG00000006421	PUS1	100	68.111	ENSGACG00000017566	pus1	79	69.685	Gasterosteus_aculeatus
ENSCAPG00000006421	PUS1	100	77.950	ENSGAGG00000016730	-	92	77.640	Gopherus_agassizii
ENSCAPG00000006421	PUS1	100	87.654	ENSGGOG00000009178	PUS1	80	90.940	Gorilla_gorilla
ENSCAPG00000006421	PUS1	94	72.039	ENSHBUG00000001316	pus1	76	72.575	Haplochromis_burtoni
ENSCAPG00000006421	PUS1	100	89.783	ENSHGLG00000016086	PUS1	83	89.783	Heterocephalus_glaber_female
ENSCAPG00000006421	PUS1	100	89.474	ENSHGLG00100019362	PUS1	83	89.474	Heterocephalus_glaber_male
ENSCAPG00000006421	PUS1	94	70.627	ENSHCOG00000014288	pus1	69	70.903	Hippocampus_comes
ENSCAPG00000006421	PUS1	99	72.188	ENSIPUG00000010387	pus1	76	75.503	Ictalurus_punctatus
ENSCAPG00000006421	PUS1	95	92.484	ENSSTOG00000011245	PUS1	76	89.198	Ictidomys_tridecemlineatus
ENSCAPG00000006421	PUS1	100	88.272	ENSJJAG00000000088	Pus1	81	87.097	Jaculus_jaculus
ENSCAPG00000006421	PUS1	94	69.637	ENSKMAG00000012702	pus1	72	69.900	Kryptolebias_marmoratus
ENSCAPG00000006421	PUS1	99	68.111	ENSLBEG00000002845	pus1	74	71.237	Labrus_bergylta
ENSCAPG00000006421	PUS1	94	79.139	ENSLACG00000018598	PUS1	74	79.195	Latimeria_chalumnae
ENSCAPG00000006421	PUS1	93	56.811	ENSLACG00000016044	-	90	57.383	Latimeria_chalumnae
ENSCAPG00000006421	PUS1	99	75.309	ENSLOCG00000006127	pus1	75	79.530	Lepisosteus_oculatus
ENSCAPG00000006421	PUS1	100	78.593	ENSLAFG00000028731	PUS1	80	82.215	Loxodonta_africana
ENSCAPG00000006421	PUS1	100	88.580	ENSMFAG00000041194	PUS1	82	91.946	Macaca_fascicularis
ENSCAPG00000006421	PUS1	100	87.692	ENSMMUG00000031463	PUS1	85	92.282	Macaca_mulatta
ENSCAPG00000006421	PUS1	100	88.889	ENSMNEG00000002814	PUS1	82	92.282	Macaca_nemestrina
ENSCAPG00000006421	PUS1	100	88.889	ENSMLEG00000043560	PUS1	91	92.282	Mandrillus_leucophaeus
ENSCAPG00000006421	PUS1	100	66.563	ENSMAMG00000007371	pus1	71	69.900	Mastacembelus_armatus
ENSCAPG00000006421	PUS1	94	72.039	ENSMZEG00005017746	pus1	71	72.575	Maylandia_zebra
ENSCAPG00000006421	PUS1	100	78.354	ENSMGAG00000001958	PUS1	99	78.354	Meleagris_gallopavo
ENSCAPG00000006421	PUS1	68	30.126	ENSMGAG00000000851	PUS3	56	30.126	Meleagris_gallopavo
ENSCAPG00000006421	PUS1	100	88.889	ENSMAUG00000001482	Pus1	80	87.814	Mesocricetus_auratus
ENSCAPG00000006421	PUS1	100	88.450	ENSMICG00000030980	PUS1	74	92.953	Microcebus_murinus
ENSCAPG00000006421	PUS1	100	89.815	ENSMOCG00000022311	Pus1	80	87.814	Microtus_ochrogaster
ENSCAPG00000006421	PUS1	99	69.159	ENSMMOG00000021022	pus1	77	71.572	Mola_mola
ENSCAPG00000006421	PUS1	100	79.141	ENSMODG00000015551	PUS1	67	83.557	Monodelphis_domestica
ENSCAPG00000006421	PUS1	100	66.873	ENSMALG00000013202	pus1	72	69.900	Monopterus_albus
ENSCAPG00000006421	PUS1	100	88.889	MGP_CAROLIEiJ_G0027551	Pus1	76	92.282	Mus_caroli
ENSCAPG00000006421	PUS1	100	88.889	ENSMUSG00000029507	Pus1	76	92.282	Mus_musculus
ENSCAPG00000006421	PUS1	100	88.580	MGP_PahariEiJ_G0024133	Pus1	76	92.282	Mus_pahari
ENSCAPG00000006421	PUS1	100	88.889	MGP_SPRETEiJ_G0028549	Pus1	76	92.282	Mus_spretus
ENSCAPG00000006421	PUS1	99	87.500	ENSMPUG00000002314	PUS1	76	90.604	Mustela_putorius_furo
ENSCAPG00000006421	PUS1	100	89.441	ENSMLUG00000015790	PUS1	88	87.888	Myotis_lucifugus
ENSCAPG00000006421	PUS1	100	88.889	ENSNGAG00000012976	Pus1	73	92.095	Nannospalax_galili
ENSCAPG00000006421	PUS1	99	69.159	ENSNBRG00000020502	pus1	80	72.241	Neolamprologus_brichardi
ENSCAPG00000006421	PUS1	99	87.850	ENSNLEG00000008505	PUS1	91	92.734	Nomascus_leucogenys
ENSCAPG00000006421	PUS1	94	72.937	ENSMEUG00000002825	PUS1	81	73.490	Notamacropus_eugenii
ENSCAPG00000006421	PUS1	95	79.085	ENSOPRG00000002701	-	78	80.201	Ochotona_princeps
ENSCAPG00000006421	PUS1	96	96.104	ENSODEG00000008248	PUS1	81	96.104	Octodon_degus
ENSCAPG00000006421	PUS1	94	72.039	ENSONIG00000003803	pus1	84	72.575	Oreochromis_niloticus
ENSCAPG00000006421	PUS1	99	77.329	ENSOANG00000010619	PUS1	68	80.537	Ornithorhynchus_anatinus
ENSCAPG00000006421	PUS1	93	91.611	ENSOCUG00000007310	PUS1	65	91.611	Oryctolagus_cuniculus
ENSCAPG00000006421	PUS1	94	72.607	ENSORLG00000010787	pus1	72	72.575	Oryzias_latipes
ENSCAPG00000006421	PUS1	94	72.937	ENSORLG00020011483	pus1	72	72.910	Oryzias_latipes_hni
ENSCAPG00000006421	PUS1	94	73.267	ENSORLG00015023012	pus1	77	73.244	Oryzias_latipes_hsok
ENSCAPG00000006421	PUS1	96	70.096	ENSOMEG00000022655	pus1	70	71.572	Oryzias_melastigma
ENSCAPG00000006421	PUS1	100	89.264	ENSOGAG00000008720	PUS1	85	88.957	Otolemur_garnettii
ENSCAPG00000006421	PUS1	100	86.420	ENSOARG00000013316	PUS1	69	89.597	Ovis_aries
ENSCAPG00000006421	PUS1	100	87.963	ENSPPAG00000040971	PUS1	80	91.275	Pan_paniscus
ENSCAPG00000006421	PUS1	63	30.263	ENSPPAG00000029283	PUSL1	75	30.263	Pan_paniscus
ENSCAPG00000006421	PUS1	99	85.000	ENSPPRG00000015456	PUS1	76	87.919	Panthera_pardus
ENSCAPG00000006421	PUS1	97	86.174	ENSPTIG00000004201	PUS1	78	87.919	Panthera_tigris_altaica
ENSCAPG00000006421	PUS1	100	87.346	ENSPTRG00000005643	PUS1	80	90.940	Pan_troglodytes
ENSCAPG00000006421	PUS1	100	88.580	ENSPANG00000000376	PUS1	82	92.282	Papio_anubis
ENSCAPG00000006421	PUS1	94	75.166	ENSPKIG00000019369	pus1	68	75.168	Paramormyrops_kingsleyae
ENSCAPG00000006421	PUS1	94	81.457	ENSPSIG00000016432	PUS1	69	81.544	Pelodiscus_sinensis
ENSCAPG00000006421	PUS1	96	69.453	ENSPMGG00000004522	pus1	85	70.903	Periophthalmus_magnuspinnatus
ENSCAPG00000006421	PUS1	100	89.815	ENSPEMG00000013448	Pus1	81	88.530	Peromyscus_maniculatus_bairdii
ENSCAPG00000006421	PUS1	93	60.465	ENSPMAG00000004636	pus1	90	61.074	Petromyzon_marinus
ENSCAPG00000006421	PUS1	93	70.432	ENSPCIG00000022609	-	68	72.822	Phascolarctos_cinereus
ENSCAPG00000006421	PUS1	96	69.775	ENSPFOG00000019669	pus1	72	71.572	Poecilia_formosa
ENSCAPG00000006421	PUS1	96	69.775	ENSPLAG00000002692	-	72	71.572	Poecilia_latipinna
ENSCAPG00000006421	PUS1	96	69.775	ENSPLAG00000007185	pus1	72	71.572	Poecilia_latipinna
ENSCAPG00000006421	PUS1	96	69.775	ENSPMEG00000011115	PUS1	72	71.572	Poecilia_mexicana
ENSCAPG00000006421	PUS1	96	69.775	ENSPMEG00000006038	pus1	74	71.572	Poecilia_mexicana
ENSCAPG00000006421	PUS1	96	69.775	ENSPREG00000007231	pus1	83	71.572	Poecilia_reticulata
ENSCAPG00000006421	PUS1	100	87.963	ENSPPYG00000005132	PUS1	70	91.611	Pongo_abelii
ENSCAPG00000006421	PUS1	82	77.567	ENSPCAG00000009110	-	61	79.762	Procavia_capensis
ENSCAPG00000006421	PUS1	100	79.448	ENSPCOG00000015595	PUS1	72	82.550	Propithecus_coquereli
ENSCAPG00000006421	PUS1	94	71.711	ENSPNYG00000013571	pus1	71	72.241	Pundamilia_nyererei
ENSCAPG00000006421	PUS1	99	71.875	ENSPNAG00000003938	pus1	71	74.832	Pygocentrus_nattereri
ENSCAPG00000006421	PUS1	100	88.580	ENSRNOG00000037500	Pus1	70	91.946	Rattus_norvegicus
ENSCAPG00000006421	PUS1	100	87.963	ENSRBIG00000043177	PUS1	83	91.275	Rhinopithecus_bieti
ENSCAPG00000006421	PUS1	100	87.654	ENSRROG00000039744	PUS1	89	87.086	Rhinopithecus_roxellana
ENSCAPG00000006421	PUS1	85	43.564	YPL212C	-	51	43.564	Saccharomyces_cerevisiae
ENSCAPG00000006421	PUS1	100	87.963	ENSSBOG00000023593	PUS1	85	91.919	Saimiri_boliviensis_boliviensis
ENSCAPG00000006421	PUS1	100	78.528	ENSSHAG00000013193	PUS1	73	82.886	Sarcophilus_harrisii
ENSCAPG00000006421	PUS1	96	76.129	ENSSFOG00015003463	pus1	68	77.517	Scleropages_formosus
ENSCAPG00000006421	PUS1	100	67.492	ENSSMAG00000019075	pus1	71	71.572	Scophthalmus_maximus
ENSCAPG00000006421	PUS1	94	72.607	ENSSDUG00000007102	pus1	71	72.575	Seriola_dumerili
ENSCAPG00000006421	PUS1	94	71.947	ENSSLDG00000022850	pus1	71	71.906	Seriola_lalandi_dorsalis
ENSCAPG00000006421	PUS1	94	78.618	ENSSARG00000008367	PUS1	96	78.523	Sorex_araneus
ENSCAPG00000006421	PUS1	100	76.220	ENSSPUG00000010009	PUS1	82	76.220	Sphenodon_punctatus
ENSCAPG00000006421	PUS1	99	68.519	ENSSPAG00000006272	pus1	76	71.906	Stegastes_partitus
ENSCAPG00000006421	PUS1	100	86.728	ENSSSCG00000009741	PUS1	75	90.604	Sus_scrofa
ENSCAPG00000006421	PUS1	94	80.198	ENSTGUG00000008068	PUS1	90	81.208	Taeniopygia_guttata
ENSCAPG00000006421	PUS1	94	70.395	ENSTRUG00000002198	pus1	77	70.667	Takifugu_rubripes
ENSCAPG00000006421	PUS1	99	67.485	ENSTNIG00000003942	pus1	76	71.333	Tetraodon_nigroviridis
ENSCAPG00000006421	PUS1	100	87.037	ENSTTRG00000000632	PUS1	77	87.037	Tursiops_truncatus
ENSCAPG00000006421	PUS1	99	86.875	ENSUAMG00000017197	PUS1	76	89.933	Ursus_americanus
ENSCAPG00000006421	PUS1	99	86.562	ENSUMAG00000002831	PUS1	90	89.933	Ursus_maritimus
ENSCAPG00000006421	PUS1	50	90.476	ENSVPAG00000009778	-	57	92.308	Vicugna_pacos
ENSCAPG00000006421	PUS1	96	88.026	ENSVVUG00000004199	PUS1	68	89.597	Vulpes_vulpes
ENSCAPG00000006421	PUS1	94	75.248	ENSXETG00000002030	pus1	75	75.839	Xenopus_tropicalis
ENSCAPG00000006421	PUS1	92	48.658	ENSXETG00000033640	-	93	48.658	Xenopus_tropicalis
ENSCAPG00000006421	PUS1	99	68.421	ENSXCOG00000004722	pus1	77	71.906	Xiphophorus_couchianus
ENSCAPG00000006421	PUS1	99	68.210	ENSXMAG00000000988	pus1	72	71.906	Xiphophorus_maculatus