EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006491 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 19468 bases
Position: chrAVPZ01000445.1:45846517-45865984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003830	RRM_1	PF00076.22	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007400	-	4998	-	ENSCAPP00000003830	1665 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006491	-	80	91.290	ENSAMEG00000007540	-	80	91.290	Ailuropoda_melanoleuca
ENSCAPG00000006491	-	94	94.626	ENSANAG00000021698	-	95	86.414	Aotus_nancymaae
ENSCAPG00000006491	-	89	97.213	ENSTSYG00000014425	-	95	86.900	Carlito_syrichta
ENSCAPG00000006491	-	80	64.401	ENSCPBG00000010830	-	88	64.222	Chrysemys_picta_bellii
ENSCAPG00000006491	-	94	88.620	ENSCANG00000038478	-	95	82.569	Colobus_angolensis_palliatus
ENSCAPG00000006491	-	57	79.798	ENSCSEG00000021605	setd1a	53	79.798	Cynoglossus_semilaevis
ENSCAPG00000006491	-	59	79.872	ENSDARG00000060030	setd1a	50	81.818	Danio_rerio
ENSCAPG00000006491	-	56	94.726	ENSDNOG00000025514	-	90	95.140	Dasypus_novemcinctus
ENSCAPG00000006491	-	51	97.600	ENSETEG00000014170	-	59	84.892	Echinops_telfairi
ENSCAPG00000006491	-	94	91.226	ENSEASG00005011195	-	95	87.623	Equus_asinus_asinus
ENSCAPG00000006491	-	88	97.569	ENSECAG00000015162	SETD1A	95	86.908	Equus_caballus
ENSCAPG00000006491	-	91	50.467	ENSFHEG00000023258	setd1a	59	74.490	Fundulus_heteroclitus
ENSCAPG00000006491	-	75	73.251	ENSGAGG00000010781	-	63	73.279	Gopherus_agassizii
ENSCAPG00000006491	-	93	93.235	ENSHGLG00000014238	-	95	89.729	Heterocephalus_glaber_female
ENSCAPG00000006491	-	83	97.233	ENSHGLG00100010551	-	95	97.233	Heterocephalus_glaber_male
ENSCAPG00000006491	-	70	57.759	ENSHCOG00000003119	setd1a	81	57.759	Hippocampus_comes
ENSCAPG00000006491	-	94	94.521	ENSMNEG00000032572	-	95	86.683	Macaca_nemestrina
ENSCAPG00000006491	-	61	69.886	ENSMAMG00000021851	setd1a	63	75.758	Mastacembelus_armatus
ENSCAPG00000006491	-	94	90.712	ENSMAUG00000008959	-	95	86.408	Mesocricetus_auratus
ENSCAPG00000006491	-	69	78.378	ENSMMOG00000016992	setd1a	66	79.461	Mola_mola
ENSCAPG00000006491	-	93	76.027	ENSMODG00000001726	-	98	73.858	Monodelphis_domestica
ENSCAPG00000006491	-	94	91.434	MGP_CAROLIEiJ_G0030519	-	95	86.833	Mus_caroli
ENSCAPG00000006491	-	94	91.996	ENSMUSG00000042308	Setd1a	95	86.760	Mus_musculus
ENSCAPG00000006491	-	94	91.805	MGP_PahariEiJ_G0013726	-	95	87.097	Mus_pahari
ENSCAPG00000006491	-	94	90.937	MGP_SPRETEiJ_G0031633	Setd1a	98	84.574	Mus_spretus
ENSCAPG00000006491	-	79	95.890	ENSMPUG00000011867	-	73	95.890	Mustela_putorius_furo
ENSCAPG00000006491	-	82	87.475	ENSMLUG00000027303	-	76	86.647	Myotis_lucifugus
ENSCAPG00000006491	-	95	93.018	ENSNLEG00000016072	-	98	88.203	Nomascus_leucogenys
ENSCAPG00000006491	-	96	78.914	ENSMEUG00000003396	-	99	75.282	Notamacropus_eugenii
ENSCAPG00000006491	-	94	89.746	ENSOPRG00000016034	-	95	85.153	Ochotona_princeps
ENSCAPG00000006491	-	59	93.548	ENSOANG00000013155	-	81	93.548	Ornithorhynchus_anatinus
ENSCAPG00000006491	-	75	97.115	ENSOCUG00000022182	-	50	85.227	Oryctolagus_cuniculus
ENSCAPG00000006491	-	94	69.206	ENSOGAG00000028006	-	96	64.338	Otolemur_garnettii
ENSCAPG00000006491	-	94	86.430	ENSOARG00000008207	-	77	96.610	Ovis_aries
ENSCAPG00000006491	-	74	97.260	ENSPPAG00000030470	-	93	97.260	Pan_paniscus
ENSCAPG00000006491	-	88	96.958	ENSPTIG00000010871	-	94	96.992	Panthera_tigris_altaica
ENSCAPG00000006491	-	76	74.611	ENSPSIG00000005027	-	76	72.304	Pelodiscus_sinensis
ENSCAPG00000006491	-	96	77.834	ENSPCIG00000016725	-	98	74.348	Phascolarctos_cinereus
ENSCAPG00000006491	-	87	100.000	ENSPPYG00000007296	-	95	100.000	Pongo_abelii
ENSCAPG00000006491	-	76	96.447	ENSPCAG00000014351	-	85	96.447	Procavia_capensis
ENSCAPG00000006491	-	89	99.242	ENSPVAG00000011049	-	90	99.242	Pteropus_vampyrus
ENSCAPG00000006491	-	70	80.808	ENSPNYG00000014139	setd1a	52	80.808	Pundamilia_nyererei
ENSCAPG00000006491	-	89	96.939	ENSRBIG00000033047	-	95	96.939	Rhinopithecus_bieti
ENSCAPG00000006491	-	74	97.260	ENSRROG00000040062	-	93	97.260	Rhinopithecus_roxellana
ENSCAPG00000006491	-	96	77.327	ENSSHAG00000010784	-	98	74.499	Sarcophilus_harrisii
ENSCAPG00000006491	-	50	81.169	ENSSFOG00015007013	setd1a	51	82.000	Scleropages_formosus
ENSCAPG00000006491	-	65	78.571	ENSSMAG00000008846	setd1a	53	79.798	Scophthalmus_maximus
ENSCAPG00000006491	-	76	92.373	ENSSARG00000005591	-	89	86.944	Sorex_araneus
ENSCAPG00000006491	-	63	100.000	ENSTBEG00000009714	-	69	100.000	Tupaia_belangeri
ENSCAPG00000006491	-	69	96.947	ENSUMAG00000013935	-	88	96.947	Ursus_maritimus
ENSCAPG00000006491	-	91	95.526	ENSVVUG00000027687	-	91	93.580	Vulpes_vulpes