EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000006545 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 3412 bases
Position: chrAVPZ01000445.1:18798581-18801992
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003893	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSCAPP00000003889	MMR_HSR1	PF01926.23	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007463	-	921	-	ENSCAPP00000003893	307 (aa)	-	-
ENSCAPT00000007459	-	1023	-	ENSCAPP00000003889	340 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000006545	-	95	45.734	ENSCAPG00000000080	SEPT14	69	45.734
ENSCAPG00000006545	-	97	40.803	ENSCAPG00000015684	SEPT11	71	40.317
ENSCAPG00000006545	-	98	47.508	ENSCAPG00000000257	SEPT9	89	47.508
ENSCAPG00000006545	-	93	44.056	ENSCAPG00000013691	SEPT12	82	42.857
ENSCAPG00000006545	-	93	51.042	ENSCAPG00000017776	-	85	49.351
ENSCAPG00000006545	-	93	46.690	ENSCAPG00000007508	-	84	44.444
ENSCAPG00000006545	-	92	55.439	ENSCAPG00000001347	SEPT1	85	55.439
ENSCAPG00000006545	-	95	44.218	ENSCAPG00000011190	SEPT8	68	44.218

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006545	-	100	98.697	ENSG00000184702	SEPT5	100	97.778	Homo_sapiens
ENSCAPG00000006545	-	99	85.246	ENSAPOG00000004707	sept5b	82	85.762	Acanthochromis_polyacanthus
ENSCAPG00000006545	-	99	90.492	ENSAPOG00000021568	sept5a	82	90.492	Acanthochromis_polyacanthus
ENSCAPG00000006545	-	100	97.394	ENSAMEG00000011509	-	74	97.394	Ailuropoda_melanoleuca
ENSCAPG00000006545	-	97	85.522	ENSACIG00000000964	-	95	79.385	Amphilophus_citrinellus
ENSCAPG00000006545	-	99	90.523	ENSACIG00000006554	sept5a	85	90.523	Amphilophus_citrinellus
ENSCAPG00000006545	-	99	84.918	ENSAOCG00000019424	sept5b	81	84.918	Amphiprion_ocellaris
ENSCAPG00000006545	-	99	90.492	ENSAOCG00000015062	sept5a	82	90.492	Amphiprion_ocellaris
ENSCAPG00000006545	-	99	90.492	ENSAPEG00000017611	sept5a	82	90.492	Amphiprion_percula
ENSCAPG00000006545	-	98	85.430	ENSAPEG00000008250	sept5b	82	85.430	Amphiprion_percula
ENSCAPG00000006545	-	99	90.492	ENSATEG00000020583	sept5a	83	90.492	Anabas_testudineus
ENSCAPG00000006545	-	99	84.262	ENSATEG00000006356	sept5b	83	84.262	Anabas_testudineus
ENSCAPG00000006545	-	100	94.463	ENSAPLG00000016224	-	87	94.463	Anas_platyrhynchos
ENSCAPG00000006545	-	100	94.463	ENSACAG00000000290	-	68	94.463	Anolis_carolinensis
ENSCAPG00000006545	-	100	98.697	ENSANAG00000025950	-	81	98.697	Aotus_nancymaae
ENSCAPG00000006545	-	99	90.492	ENSACLG00000011272	sept5a	85	90.492	Astatotilapia_calliptera
ENSCAPG00000006545	-	99	83.607	ENSACLG00000008299	sept5b	83	83.607	Astatotilapia_calliptera
ENSCAPG00000006545	-	99	89.180	ENSAMXG00000006159	sept5a	82	89.180	Astyanax_mexicanus
ENSCAPG00000006545	-	100	98.046	ENSBTAG00000008320	SEPT5	83	98.046	Bos_taurus
ENSCAPG00000006545	-	100	98.697	ENSCJAG00000031147	-	83	98.697	Callithrix_jacchus
ENSCAPG00000006545	-	100	98.697	ENSCAFG00000014533	SEPT5	81	98.697	Canis_familiaris
ENSCAPG00000006545	-	100	98.697	ENSCAFG00020007897	-	83	98.697	Canis_lupus_dingo
ENSCAPG00000006545	-	100	92.880	ENSCHIG00000000129	-	79	92.880	Capra_hircus
ENSCAPG00000006545	-	100	99.023	ENSTSYG00000037551	-	93	99.103	Carlito_syrichta
ENSCAPG00000006545	-	100	100.000	ENSCPOG00000010483	-	83	100.000	Cavia_porcellus
ENSCAPG00000006545	-	100	98.697	ENSCCAG00000036918	-	90	97.758	Cebus_capucinus
ENSCAPG00000006545	-	100	98.697	ENSCATG00000040593	-	83	98.697	Cercocebus_atys
ENSCAPG00000006545	-	100	99.674	ENSCLAG00000015333	-	83	99.674	Chinchilla_lanigera
ENSCAPG00000006545	-	100	98.697	ENSCSAG00000011732	-	83	98.697	Chlorocebus_sabaeus
ENSCAPG00000006545	-	100	94.463	ENSCPBG00000010660	-	83	94.463	Chrysemys_picta_bellii
ENSCAPG00000006545	-	100	98.371	ENSCANG00000030373	-	86	95.820	Colobus_angolensis_palliatus
ENSCAPG00000006545	-	100	99.023	ENSCGRG00001018409	-	83	99.023	Cricetulus_griseus_chok1gshd
ENSCAPG00000006545	-	100	99.023	ENSCGRG00000011656	-	81	99.023	Cricetulus_griseus_crigri
ENSCAPG00000006545	-	96	86.824	ENSCSEG00000009877	-	92	86.577	Cynoglossus_semilaevis
ENSCAPG00000006545	-	99	85.902	ENSCSEG00000019641	sept5a	95	81.395	Cynoglossus_semilaevis
ENSCAPG00000006545	-	99	90.492	ENSCVAG00000017986	sept5a	84	90.492	Cyprinodon_variegatus
ENSCAPG00000006545	-	99	87.213	ENSDARG00000036031	sept5b	93	87.251	Danio_rerio
ENSCAPG00000006545	-	99	88.816	ENSDARG00000013843	sept5a	74	88.816	Danio_rerio
ENSCAPG00000006545	-	100	99.349	ENSDORG00000013930	-	83	99.349	Dipodomys_ordii
ENSCAPG00000006545	-	91	97.842	ENSEASG00005010502	-	83	97.842	Equus_asinus_asinus
ENSCAPG00000006545	-	100	98.371	ENSECAG00000020718	-	58	98.371	Equus_caballus
ENSCAPG00000006545	-	99	84.539	ENSELUG00000005164	sept5b	82	84.539	Esox_lucius
ENSCAPG00000006545	-	99	89.508	ENSELUG00000009028	sept5a	81	89.508	Esox_lucius
ENSCAPG00000006545	-	100	96.743	ENSFCAG00000035936	-	88	91.925	Felis_catus
ENSCAPG00000006545	-	100	94.463	ENSFALG00000008028	-	83	94.463	Ficedula_albicollis
ENSCAPG00000006545	-	100	100.000	ENSFDAG00000014909	-	87	100.000	Fukomys_damarensis
ENSCAPG00000006545	-	99	90.164	ENSFHEG00000018533	sept5a	86	89.869	Fundulus_heteroclitus
ENSCAPG00000006545	-	99	73.355	ENSFHEG00000003693	sept5b	98	74.247	Fundulus_heteroclitus
ENSCAPG00000006545	-	100	94.788	ENSGALG00000001688	SEPT5	83	94.788	Gallus_gallus
ENSCAPG00000006545	-	99	82.295	ENSGAFG00000007663	sept5b	78	82.295	Gambusia_affinis
ENSCAPG00000006545	-	99	90.492	ENSGAFG00000000767	sept5a	86	90.492	Gambusia_affinis
ENSCAPG00000006545	-	99	89.542	ENSGACG00000005538	sept5a	93	90.530	Gasterosteus_aculeatus
ENSCAPG00000006545	-	100	94.463	ENSGAGG00000014385	-	83	94.570	Gopherus_agassizii
ENSCAPG00000006545	-	100	98.697	ENSGGOG00000016545	-	91	98.190	Gorilla_gorilla
ENSCAPG00000006545	-	99	83.934	ENSHBUG00000007908	sept5b	83	83.934	Haplochromis_burtoni
ENSCAPG00000006545	-	100	100.000	ENSHGLG00000013741	-	83	100.000	Heterocephalus_glaber_female
ENSCAPG00000006545	-	99	90.164	ENSHCOG00000005881	sept5a	82	90.164	Hippocampus_comes
ENSCAPG00000006545	-	98	78.477	ENSIPUG00000025006	sept5a	84	65.986	Ictalurus_punctatus
ENSCAPG00000006545	-	100	99.023	ENSSTOG00000010725	-	83	99.023	Ictidomys_tridecemlineatus
ENSCAPG00000006545	-	100	99.349	ENSJJAG00000000091	-	83	99.349	Jaculus_jaculus
ENSCAPG00000006545	-	99	90.492	ENSKMAG00000003408	sept5a	82	90.492	Kryptolebias_marmoratus
ENSCAPG00000006545	-	98	83.775	ENSLBEG00000028216	-	81	83.775	Labrus_bergylta
ENSCAPG00000006545	-	99	89.836	ENSLBEG00000025389	sept5a	87	85.047	Labrus_bergylta
ENSCAPG00000006545	-	99	91.803	ENSLACG00000015559	sept5b	77	91.803	Latimeria_chalumnae
ENSCAPG00000006545	-	100	98.371	ENSLAFG00000028004	-	83	98.371	Loxodonta_africana
ENSCAPG00000006545	-	100	98.697	ENSMFAG00000038117	-	83	98.697	Macaca_fascicularis
ENSCAPG00000006545	-	100	98.697	ENSMMUG00000017134	-	90	97.758	Macaca_mulatta
ENSCAPG00000006545	-	100	98.697	ENSMNEG00000036305	-	83	98.697	Macaca_nemestrina
ENSCAPG00000006545	-	100	98.697	ENSMLEG00000029088	-	87	98.697	Mandrillus_leucophaeus
ENSCAPG00000006545	-	99	90.492	ENSMAMG00000014426	sept5a	82	90.492	Mastacembelus_armatus
ENSCAPG00000006545	-	99	84.918	ENSMAMG00000006704	sept5b	88	83.280	Mastacembelus_armatus
ENSCAPG00000006545	-	99	90.492	ENSMZEG00005009762	sept5a	83	90.196	Maylandia_zebra
ENSCAPG00000006545	-	99	83.828	ENSMZEG00005011980	sept5b	83	83.828	Maylandia_zebra
ENSCAPG00000006545	-	100	92.880	ENSMGAG00000001319	-	84	92.880	Meleagris_gallopavo
ENSCAPG00000006545	-	100	99.023	ENSMAUG00000014786	-	83	99.023	Mesocricetus_auratus
ENSCAPG00000006545	-	100	98.697	ENSMICG00000028407	-	81	98.697	Microcebus_murinus
ENSCAPG00000006545	-	100	99.023	ENSMOCG00000000071	-	83	99.023	Microtus_ochrogaster
ENSCAPG00000006545	-	99	89.869	ENSMMOG00000011704	sept5a	92	87.541	Mola_mola
ENSCAPG00000006545	-	98	82.119	ENSMMOG00000010567	sept5b	83	82.119	Mola_mola
ENSCAPG00000006545	-	99	90.789	ENSMALG00000020359	sept5a	91	93.836	Monopterus_albus
ENSCAPG00000006545	-	99	82.951	ENSMALG00000005830	sept5b	89	81.567	Monopterus_albus
ENSCAPG00000006545	-	100	99.023	MGP_CAROLIEiJ_G0020551	-	83	99.023	Mus_caroli
ENSCAPG00000006545	-	100	99.023	ENSMUSG00000072214	Sept5	100	99.206	Mus_musculus
ENSCAPG00000006545	-	100	99.023	ENSMUSG00000116594	AC133488.1	84	99.023	Mus_musculus
ENSCAPG00000006545	-	100	99.023	MGP_PahariEiJ_G0016256	-	83	99.023	Mus_pahari
ENSCAPG00000006545	-	100	99.023	MGP_SPRETEiJ_G0021446	-	83	99.023	Mus_spretus
ENSCAPG00000006545	-	91	98.561	ENSMPUG00000003893	-	86	98.561	Mustela_putorius_furo
ENSCAPG00000006545	-	100	98.371	ENSMLUG00000002506	-	78	98.371	Myotis_lucifugus
ENSCAPG00000006545	-	100	99.349	ENSNGAG00000013782	-	83	99.349	Nannospalax_galili
ENSCAPG00000006545	-	99	90.492	ENSNBRG00000018717	sept5a	89	89.241	Neolamprologus_brichardi
ENSCAPG00000006545	-	99	83.828	ENSNBRG00000004761	sept5b	83	83.828	Neolamprologus_brichardi
ENSCAPG00000006545	-	97	97.643	ENSNLEG00000005511	-	93	97.000	Nomascus_leucogenys
ENSCAPG00000006545	-	100	95.765	ENSMEUG00000015556	-	87	95.765	Notamacropus_eugenii
ENSCAPG00000006545	-	100	95.440	ENSOPRG00000007708	-	87	95.440	Ochotona_princeps
ENSCAPG00000006545	-	100	100.000	ENSODEG00000016498	-	83	100.000	Octodon_degus
ENSCAPG00000006545	-	99	83.934	ENSONIG00000011388	sept5b	91	77.976	Oreochromis_niloticus
ENSCAPG00000006545	-	99	81.967	ENSORLG00000001081	sept5b	84	80.128	Oryzias_latipes
ENSCAPG00000006545	-	99	90.492	ENSORLG00000024104	sept5a	90	85.670	Oryzias_latipes
ENSCAPG00000006545	-	99	90.492	ENSORLG00020005445	sept5a	90	85.670	Oryzias_latipes_hni
ENSCAPG00000006545	-	99	81.639	ENSORLG00020016872	sept5b	82	81.639	Oryzias_latipes_hni
ENSCAPG00000006545	-	99	81.967	ENSORLG00015003711	sept5b	84	80.128	Oryzias_latipes_hsok
ENSCAPG00000006545	-	99	90.492	ENSORLG00015015192	sept5a	87	85.670	Oryzias_latipes_hsok
ENSCAPG00000006545	-	88	81.852	ENSOMEG00000022819	sept5b	89	81.919	Oryzias_melastigma
ENSCAPG00000006545	-	99	90.492	ENSOMEG00000017874	sept5a	91	85.670	Oryzias_melastigma
ENSCAPG00000006545	-	100	99.349	ENSOGAG00000026834	-	83	99.349	Otolemur_garnettii
ENSCAPG00000006545	-	100	98.697	ENSPPAG00000042516	-	90	97.758	Pan_paniscus
ENSCAPG00000006545	-	100	99.023	ENSPPRG00000002930	-	83	99.023	Panthera_pardus
ENSCAPG00000006545	-	100	99.023	ENSPTIG00000019967	-	81	99.023	Panthera_tigris_altaica
ENSCAPG00000006545	-	100	98.697	ENSPTRG00000014066	-	90	97.758	Pan_troglodytes
ENSCAPG00000006545	-	100	98.697	ENSPANG00000001023	-	83	98.697	Papio_anubis
ENSCAPG00000006545	-	99	91.148	ENSPKIG00000024641	sept5b	83	91.148	Paramormyrops_kingsleyae
ENSCAPG00000006545	-	91	94.245	ENSPSIG00000002889	-	86	94.245	Pelodiscus_sinensis
ENSCAPG00000006545	-	99	84.590	ENSPMGG00000021306	sept5b	83	84.590	Periophthalmus_magnuspinnatus
ENSCAPG00000006545	-	99	90.789	ENSPMGG00000018375	sept5a	83	90.789	Periophthalmus_magnuspinnatus
ENSCAPG00000006545	-	100	99.023	ENSPEMG00000013636	-	87	99.023	Peromyscus_maniculatus_bairdii
ENSCAPG00000006545	-	99	82.623	ENSPFOG00000016894	sept5b	83	82.623	Poecilia_formosa
ENSCAPG00000006545	-	100	90.228	ENSPFOG00000011811	sept5a	82	90.820	Poecilia_formosa
ENSCAPG00000006545	-	99	90.820	ENSPLAG00000018547	sept5a	90	91.324	Poecilia_latipinna
ENSCAPG00000006545	-	99	82.026	ENSPLAG00000005877	sept5b	83	82.026	Poecilia_latipinna
ENSCAPG00000006545	-	75	80.603	ENSPMEG00000017826	sept5b	92	80.603	Poecilia_mexicana
ENSCAPG00000006545	-	99	90.492	ENSPMEG00000004070	sept5a	82	90.492	Poecilia_mexicana
ENSCAPG00000006545	-	99	90.492	ENSPREG00000011585	sept5a	81	90.492	Poecilia_reticulata
ENSCAPG00000006545	-	99	82.085	ENSPREG00000013868	sept5b	81	82.085	Poecilia_reticulata
ENSCAPG00000006545	-	72	97.738	ENSPPYG00000011583	-	86	97.738	Pongo_abelii
ENSCAPG00000006545	-	100	98.697	ENSPCOG00000012479	-	83	98.697	Propithecus_coquereli
ENSCAPG00000006545	-	100	98.697	ENSPVAG00000012974	-	76	98.697	Pteropus_vampyrus
ENSCAPG00000006545	-	99	90.492	ENSPNYG00000008373	sept5a	85	90.492	Pundamilia_nyererei
ENSCAPG00000006545	-	99	83.607	ENSPNYG00000010341	sept5b	91	85.085	Pundamilia_nyererei
ENSCAPG00000006545	-	99	89.180	ENSPNAG00000001270	sept5b	89	84.424	Pygocentrus_nattereri
ENSCAPG00000006545	-	99	89.836	ENSPNAG00000007785	sept5a	83	89.836	Pygocentrus_nattereri
ENSCAPG00000006545	-	100	98.697	ENSRNOG00000029912	Sept5	83	98.697	Rattus_norvegicus
ENSCAPG00000006545	-	100	98.697	ENSRBIG00000041362	-	81	98.697	Rhinopithecus_bieti
ENSCAPG00000006545	-	100	98.697	ENSRROG00000041246	-	90	97.758	Rhinopithecus_roxellana
ENSCAPG00000006545	-	100	98.697	ENSSBOG00000027910	-	86	98.697	Saimiri_boliviensis_boliviensis
ENSCAPG00000006545	-	100	95.765	ENSSHAG00000011753	-	83	96.043	Sarcophilus_harrisii
ENSCAPG00000006545	-	99	91.803	ENSSFOG00015014043	sept5	90	86.916	Scleropages_formosus
ENSCAPG00000006545	-	99	85.574	ENSSMAG00000009333	sept5b	87	82.243	Scophthalmus_maximus
ENSCAPG00000006545	-	99	90.492	ENSSMAG00000006148	sept5a	81	90.492	Scophthalmus_maximus
ENSCAPG00000006545	-	99	85.574	ENSSDUG00000006594	sept5b	85	84.365	Seriola_dumerili
ENSCAPG00000006545	-	99	89.180	ENSSDUG00000002398	sept5a	94	88.839	Seriola_dumerili
ENSCAPG00000006545	-	99	90.492	ENSSLDG00000003964	sept5a	95	86.283	Seriola_lalandi_dorsalis
ENSCAPG00000006545	-	99	85.902	ENSSLDG00000005541	sept5b	69	84.194	Seriola_lalandi_dorsalis
ENSCAPG00000006545	-	100	93.485	ENSSPUG00000015346	-	87	93.485	Sphenodon_punctatus
ENSCAPG00000006545	-	99	85.902	ENSSPAG00000000073	sept5b	81	85.902	Stegastes_partitus
ENSCAPG00000006545	-	99	90.492	ENSSPAG00000015627	sept5a	81	90.492	Stegastes_partitus
ENSCAPG00000006545	-	100	98.371	ENSSSCG00000010128	-	78	98.371	Sus_scrofa
ENSCAPG00000006545	-	100	94.463	ENSTGUG00000008412	-	78	94.463	Taeniopygia_guttata
ENSCAPG00000006545	-	99	89.508	ENSTRUG00000016478	sept5a	90	84.735	Takifugu_rubripes
ENSCAPG00000006545	-	99	83.224	ENSTRUG00000018608	sept5b	82	83.224	Takifugu_rubripes
ENSCAPG00000006545	-	99	83.279	ENSTNIG00000013578	sept5b	82	83.279	Tetraodon_nigroviridis
ENSCAPG00000006545	-	99	85.993	ENSTNIG00000015926	sept5a	82	85.993	Tetraodon_nigroviridis
ENSCAPG00000006545	-	100	98.697	ENSUAMG00000011220	-	81	98.697	Ursus_americanus
ENSCAPG00000006545	-	100	98.697	ENSVVUG00000025380	-	77	98.697	Vulpes_vulpes
ENSCAPG00000006545	-	100	93.811	ENSXETG00000030888	sept5	83	93.811	Xenopus_tropicalis
ENSCAPG00000006545	-	99	90.196	ENSXCOG00000002175	sept5a	94	90.411	Xiphophorus_couchianus
ENSCAPG00000006545	-	99	82.566	ENSXCOG00000016246	sept5b	85	82.566	Xiphophorus_couchianus
ENSCAPG00000006545	-	99	90.164	ENSXMAG00000014644	sept5a	86	90.164	Xiphophorus_maculatus
ENSCAPG00000006545	-	99	82.566	ENSXMAG00000016115	sept5b	85	82.566	Xiphophorus_maculatus