EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000006550 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 4291 bases
Position: chrAVPZ01000012.1:35216949-35221239
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000003869	RNase_T	PF00929.24	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007439	-	537	-	ENSCAPP00000003869	179 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000006550	-	64	48.734	ENSCAPG00000011672	ISG20	87	48.734
ENSCAPG00000006550	-	80	36.264	ENSCAPG00000014583	REXO4	51	36.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006550	-	100	68.468	ENSG00000181026	AEN	68	68.468	Homo_sapiens
ENSCAPG00000006550	-	100	68.018	ENSAMEG00000012798	AEN	69	68.018	Ailuropoda_melanoleuca
ENSCAPG00000006550	-	100	70.270	ENSANAG00000026698	AEN	68	70.270	Aotus_nancymaae
ENSCAPG00000006550	-	100	68.018	ENSBTAG00000017632	AEN	68	68.018	Bos_taurus
ENSCAPG00000006550	-	97	69.444	ENSCJAG00000012988	AEN	66	69.444	Callithrix_jacchus
ENSCAPG00000006550	-	98	71.233	ENSCAFG00000011521	AEN	68	71.233	Canis_familiaris
ENSCAPG00000006550	-	98	71.233	ENSCAFG00020018839	AEN	68	71.233	Canis_lupus_dingo
ENSCAPG00000006550	-	100	68.018	ENSCHIG00000001561	AEN	68	68.018	Capra_hircus
ENSCAPG00000006550	-	100	71.171	ENSTSYG00000012416	AEN	68	71.171	Carlito_syrichta
ENSCAPG00000006550	-	100	80.180	ENSCPOG00000021693	AEN	69	80.180	Cavia_porcellus
ENSCAPG00000006550	-	100	68.018	ENSCCAG00000037160	AEN	68	68.018	Cebus_capucinus
ENSCAPG00000006550	-	100	68.919	ENSCATG00000034567	AEN	68	68.919	Cercocebus_atys
ENSCAPG00000006550	-	94	76.303	ENSCLAG00000008791	AEN	69	76.818	Chinchilla_lanigera
ENSCAPG00000006550	-	100	68.919	ENSCSAG00000017196	AEN	68	68.919	Chlorocebus_sabaeus
ENSCAPG00000006550	-	89	59.113	ENSCPBG00000017884	AEN	87	38.596	Chrysemys_picta_bellii
ENSCAPG00000006550	-	94	70.142	ENSCANG00000037330	AEN	65	70.142	Colobus_angolensis_palliatus
ENSCAPG00000006550	-	99	65.909	ENSCGRG00001021559	Aen	69	65.909	Cricetulus_griseus_chok1gshd
ENSCAPG00000006550	-	99	65.909	ENSCGRG00000000641	Aen	69	65.909	Cricetulus_griseus_crigri
ENSCAPG00000006550	-	93	70.335	ENSDNOG00000001849	-	69	70.335	Dasypus_novemcinctus
ENSCAPG00000006550	-	91	65.049	ENSDORG00000015546	Aen	68	65.049	Dipodomys_ordii
ENSCAPG00000006550	-	87	65.152	ENSETEG00000006167	AEN	67	65.152	Echinops_telfairi
ENSCAPG00000006550	-	100	68.018	ENSEASG00005015361	AEN	68	68.018	Equus_asinus_asinus
ENSCAPG00000006550	-	100	68.018	ENSECAG00000037942	AEN	68	68.018	Equus_caballus
ENSCAPG00000006550	-	86	65.482	ENSEEUG00000007015	AEN	69	65.482	Erinaceus_europaeus
ENSCAPG00000006550	-	100	68.919	ENSFCAG00000023571	AEN	68	68.919	Felis_catus
ENSCAPG00000006550	-	89	55.172	ENSFALG00000010440	AEN	55	55.172	Ficedula_albicollis
ENSCAPG00000006550	-	99	72.851	ENSFDAG00000009743	AEN	69	72.851	Fukomys_damarensis
ENSCAPG00000006550	-	89	59.113	ENSGAGG00000013545	AEN	51	59.113	Gopherus_agassizii
ENSCAPG00000006550	-	100	68.919	ENSGGOG00000010180	AEN	68	68.919	Gorilla_gorilla
ENSCAPG00000006550	-	95	88.824	ENSHGLG00000008738	-	99	88.824	Heterocephalus_glaber_female
ENSCAPG00000006550	-	99	71.946	ENSHGLG00100013826	AEN	69	71.946	Heterocephalus_glaber_male
ENSCAPG00000006550	-	98	85.714	ENSSTOG00000011560	-	96	85.714	Ictidomys_tridecemlineatus
ENSCAPG00000006550	-	100	81.006	ENSJJAG00000022647	-	98	81.006	Jaculus_jaculus
ENSCAPG00000006550	-	89	68.159	ENSLAFG00000015182	AEN	66	68.159	Loxodonta_africana
ENSCAPG00000006550	-	100	69.369	ENSMFAG00000001458	AEN	68	69.369	Macaca_fascicularis
ENSCAPG00000006550	-	100	69.369	ENSMMUG00000022516	AEN	68	69.369	Macaca_mulatta
ENSCAPG00000006550	-	100	68.919	ENSMNEG00000040133	AEN	68	68.919	Macaca_nemestrina
ENSCAPG00000006550	-	100	68.919	ENSMLEG00000032850	AEN	68	68.919	Mandrillus_leucophaeus
ENSCAPG00000006550	-	100	66.216	ENSMAUG00000000489	Aen	70	66.216	Mesocricetus_auratus
ENSCAPG00000006550	-	96	71.163	ENSMICG00000027602	AEN	67	71.163	Microcebus_murinus
ENSCAPG00000006550	-	94	66.509	ENSMOCG00000011735	Aen	68	66.509	Microtus_ochrogaster
ENSCAPG00000006550	-	91	64.734	ENSMODG00000019584	-	62	64.734	Monodelphis_domestica
ENSCAPG00000006550	-	98	82.955	MGP_CAROLIEiJ_G0029872	Aen	97	82.955	Mus_caroli
ENSCAPG00000006550	-	99	83.051	ENSMUSG00000030609	Aen	97	83.051	Mus_musculus
ENSCAPG00000006550	-	98	81.818	MGP_PahariEiJ_G0013094	Aen	97	81.818	Mus_pahari
ENSCAPG00000006550	-	85	58.974	MGP_SPRETEiJ_G0030974	-	89	58.974	Mus_spretus
ENSCAPG00000006550	-	99	69.683	ENSMPUG00000015821	AEN	58	69.683	Mustela_putorius_furo
ENSCAPG00000006550	-	100	68.018	ENSMLUG00000023065	AEN	89	68.018	Myotis_lucifugus
ENSCAPG00000006550	-	100	68.919	ENSNGAG00000011590	Aen	70	68.919	Nannospalax_galili
ENSCAPG00000006550	-	100	69.820	ENSNLEG00000032314	AEN	68	69.820	Nomascus_leucogenys
ENSCAPG00000006550	-	85	62.437	ENSMEUG00000005303	-	64	62.437	Notamacropus_eugenii
ENSCAPG00000006550	-	94	92.899	ENSODEG00000015278	-	99	92.899	Octodon_degus
ENSCAPG00000006550	-	99	67.241	ENSOGAG00000029852	AEN	70	67.241	Otolemur_garnettii
ENSCAPG00000006550	-	99	68.326	ENSOARG00000010957	AEN	68	68.326	Ovis_aries
ENSCAPG00000006550	-	100	68.919	ENSPPAG00000039598	AEN	68	68.919	Pan_paniscus
ENSCAPG00000006550	-	100	68.018	ENSPPRG00000022756	AEN	67	68.018	Panthera_pardus
ENSCAPG00000006550	-	100	68.919	ENSPTRG00000007422	AEN	68	68.919	Pan_troglodytes
ENSCAPG00000006550	-	100	68.919	ENSPANG00000005905	AEN	68	68.919	Papio_anubis
ENSCAPG00000006550	-	89	60.938	ENSPSIG00000014281	AEN	64	60.938	Pelodiscus_sinensis
ENSCAPG00000006550	-	98	66.055	ENSPEMG00000020445	Aen	68	66.055	Peromyscus_maniculatus_bairdii
ENSCAPG00000006550	-	91	63.768	ENSPCIG00000006401	-	58	63.768	Phascolarctos_cinereus
ENSCAPG00000006550	-	100	69.369	ENSPPYG00000006755	AEN	68	69.369	Pongo_abelii
ENSCAPG00000006550	-	96	71.163	ENSPCOG00000020924	AEN	66	71.163	Propithecus_coquereli
ENSCAPG00000006550	-	87	71.357	ENSPVAG00000007189	AEN	61	71.357	Pteropus_vampyrus
ENSCAPG00000006550	-	100	66.667	ENSRNOG00000018421	Aen	67	66.667	Rattus_norvegicus
ENSCAPG00000006550	-	94	69.194	ENSRBIG00000031540	AEN	65	69.194	Rhinopithecus_bieti
ENSCAPG00000006550	-	94	70.142	ENSRROG00000043282	AEN	65	70.142	Rhinopithecus_roxellana
ENSCAPG00000006550	-	100	69.369	ENSSBOG00000021857	AEN	68	69.369	Saimiri_boliviensis_boliviensis
ENSCAPG00000006550	-	91	62.802	ENSSHAG00000017070	-	62	62.802	Sarcophilus_harrisii
ENSCAPG00000006550	-	100	70.721	ENSSSCG00000005102	AEN	68	70.721	Sus_scrofa
ENSCAPG00000006550	-	89	56.158	ENSTGUG00000008335	AEN	67	56.158	Taeniopygia_guttata
ENSCAPG00000006550	-	89	69.458	ENSTBEG00000016234	AEN	64	69.458	Tupaia_belangeri
ENSCAPG00000006550	-	90	69.118	ENSTTRG00000014668	AEN	65	69.118	Tursiops_truncatus
ENSCAPG00000006550	-	71	64.706	ENSUAMG00000019063	-	97	64.706	Ursus_americanus
ENSCAPG00000006550	-	98	71.233	ENSVVUG00000012020	AEN	68	71.233	Vulpes_vulpes