EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000006662 (Gene tree)
Gene ID: -
Gene Symbol: GNL1
Alias: HSR1
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 5521 bases
Position: chrAVPZ01000239.1:192719-198239
Accession: 4413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004058	MMR_HSR1	PF01926.23	1.7e-13	1	1
ENSCAPP00000004051	MMR_HSR1	PF01926.23	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007622	GNL1-201	1656	-	ENSCAPP00000004051	551 (aa)	-	-
ENSCAPT00000007629	GNL1-202	1647	-	ENSCAPP00000004058	548 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000006662	GNL1	63	35.780	ENSCAPG00000009856	LSG1	73	31.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006662	GNL1	98	89.925	ENSG00000204590	GNL1	88	90.858	Homo_sapiens
ENSCAPG00000006662	GNL1	92	57.198	ENSAPOG00000006315	gnl1	89	55.898	Acanthochromis_polyacanthus
ENSCAPG00000006662	GNL1	98	90.112	ENSAMEG00000013421	GNL1	88	91.045	Ailuropoda_melanoleuca
ENSCAPG00000006662	GNL1	92	57.227	ENSACIG00000013539	gnl1	88	56.593	Amphilophus_citrinellus
ENSCAPG00000006662	GNL1	92	57.393	ENSAOCG00000008320	gnl1	89	56.080	Amphiprion_ocellaris
ENSCAPG00000006662	GNL1	92	57.588	ENSAPEG00000011154	gnl1	89	56.261	Amphiprion_percula
ENSCAPG00000006662	GNL1	86	59.375	ENSATEG00000020647	gnl1	89	56.466	Anabas_testudineus
ENSCAPG00000006662	GNL1	98	61.982	ENSACAG00000010395	GNL1	88	63.964	Anolis_carolinensis
ENSCAPG00000006662	GNL1	98	90.520	ENSANAG00000028106	GNL1	88	91.450	Aotus_nancymaae
ENSCAPG00000006662	GNL1	92	57.227	ENSACLG00000025394	gnl1	88	55.941	Astatotilapia_calliptera
ENSCAPG00000006662	GNL1	88	57.732	ENSAMXG00000016080	gnl1	87	52.583	Astyanax_mexicanus
ENSCAPG00000006662	GNL1	98	90.112	ENSBTAG00000025516	GNL1	88	91.045	Bos_taurus
ENSCAPG00000006662	GNL1	98	89.777	ENSCJAG00000019996	GNL1	88	90.706	Callithrix_jacchus
ENSCAPG00000006662	GNL1	98	89.552	ENSCAFG00000000396	GNL1	88	90.485	Canis_familiaris
ENSCAPG00000006662	GNL1	98	89.552	ENSCAFG00020017556	GNL1	88	90.485	Canis_lupus_dingo
ENSCAPG00000006662	GNL1	98	90.112	ENSCHIG00000019763	GNL1	88	91.045	Capra_hircus
ENSCAPG00000006662	GNL1	98	90.112	ENSTSYG00000000164	GNL1	88	91.045	Carlito_syrichta
ENSCAPG00000006662	GNL1	98	99.813	ENSCPOG00000001944	GNL1	88	99.813	Cavia_porcellus
ENSCAPG00000006662	GNL1	98	90.672	ENSCCAG00000037467	GNL1	88	91.604	Cebus_capucinus
ENSCAPG00000006662	GNL1	98	90.485	ENSCATG00000045232	GNL1	88	91.418	Cercocebus_atys
ENSCAPG00000006662	GNL1	98	93.470	ENSCLAG00000012557	GNL1	92	94.030	Chinchilla_lanigera
ENSCAPG00000006662	GNL1	98	90.299	ENSCSAG00000008202	GNL1	88	91.231	Chlorocebus_sabaeus
ENSCAPG00000006662	GNL1	75	90.554	ENSCHOG00000010907	GNL1	68	90.554	Choloepus_hoffmanni
ENSCAPG00000006662	GNL1	86	68.577	ENSCPBG00000018821	GNL1	88	64.388	Chrysemys_picta_bellii
ENSCAPG00000006662	GNL1	85	52.229	ENSCING00000014499	-	87	52.017	Ciona_intestinalis
ENSCAPG00000006662	GNL1	86	52.452	ENSCSAVG00000007354	-	81	52.452	Ciona_savignyi
ENSCAPG00000006662	GNL1	98	90.299	ENSCANG00000012933	GNL1	88	91.231	Colobus_angolensis_palliatus
ENSCAPG00000006662	GNL1	98	90.672	ENSCGRG00001004986	Gnl1	88	90.672	Cricetulus_griseus_chok1gshd
ENSCAPG00000006662	GNL1	98	90.672	ENSCGRG00000014309	Gnl1	92	90.672	Cricetulus_griseus_crigri
ENSCAPG00000006662	GNL1	87	51.434	ENSCSEG00000019714	gnl1	86	49.336	Cynoglossus_semilaevis
ENSCAPG00000006662	GNL1	86	56.549	ENSCVAG00000022650	gnl1	88	54.281	Cyprinodon_variegatus
ENSCAPG00000006662	GNL1	86	58.824	ENSDARG00000061789	gnl1	88	56.827	Danio_rerio
ENSCAPG00000006662	GNL1	98	72.171	ENSDNOG00000041571	GNL1	88	73.098	Dasypus_novemcinctus
ENSCAPG00000006662	GNL1	97	42.545	FBgn0032882	Ns4	78	44.538	Drosophila_melanogaster
ENSCAPG00000006662	GNL1	57	88.818	ENSETEG00000005518	-	100	87.859	Echinops_telfairi
ENSCAPG00000006662	GNL1	61	54.670	ENSEBUG00000009531	-	96	53.846	Eptatretus_burgeri
ENSCAPG00000006662	GNL1	98	89.925	ENSEASG00005018610	GNL1	88	90.858	Equus_asinus_asinus
ENSCAPG00000006662	GNL1	98	90.112	ENSECAG00000023081	GNL1	88	91.045	Equus_caballus
ENSCAPG00000006662	GNL1	86	60.494	ENSELUG00000006281	gnl1	88	57.630	Esox_lucius
ENSCAPG00000006662	GNL1	98	90.112	ENSFCAG00000007676	GNL1	88	91.045	Felis_catus
ENSCAPG00000006662	GNL1	96	94.129	ENSFDAG00000000584	GNL1	100	94.129	Fukomys_damarensis
ENSCAPG00000006662	GNL1	86	57.588	ENSFHEG00000011353	gnl1	88	54.463	Fundulus_heteroclitus
ENSCAPG00000006662	GNL1	86	57.708	ENSGMOG00000015224	gnl1	88	54.645	Gadus_morhua
ENSCAPG00000006662	GNL1	86	57.950	ENSGAFG00000014611	gnl1	82	57.087	Gambusia_affinis
ENSCAPG00000006662	GNL1	88	57.809	ENSGACG00000009765	gnl1	88	54.234	Gasterosteus_aculeatus
ENSCAPG00000006662	GNL1	98	90.485	ENSGGOG00000014590	GNL1	88	91.418	Gorilla_gorilla
ENSCAPG00000006662	GNL1	92	57.227	ENSHBUG00000016745	gnl1	88	56.856	Haplochromis_burtoni
ENSCAPG00000006662	GNL1	98	90.538	ENSHGLG00000017193	GNL1	88	90.538	Heterocephalus_glaber_female
ENSCAPG00000006662	GNL1	96	89.414	ENSHGLG00100009994	GNL1	100	90.926	Heterocephalus_glaber_male
ENSCAPG00000006662	GNL1	97	57.299	ENSHCOG00000012493	gnl1	88	57.299	Hippocampus_comes
ENSCAPG00000006662	GNL1	86	60.125	ENSIPUG00000004850	gnl1	88	58.106	Ictalurus_punctatus
ENSCAPG00000006662	GNL1	98	89.739	ENSSTOG00000011822	GNL1	88	90.299	Ictidomys_tridecemlineatus
ENSCAPG00000006662	GNL1	98	89.179	ENSJJAG00000010831	-	88	89.179	Jaculus_jaculus
ENSCAPG00000006662	GNL1	86	59.583	ENSKMAG00000009059	gnl1	89	56.466	Kryptolebias_marmoratus
ENSCAPG00000006662	GNL1	86	58.212	ENSLBEG00000011038	gnl1	89	54.645	Labrus_bergylta
ENSCAPG00000006662	GNL1	98	66.357	ENSLACG00000001713	GNL1	88	66.357	Latimeria_chalumnae
ENSCAPG00000006662	GNL1	98	90.672	ENSLAFG00000030406	GNL1	88	90.672	Loxodonta_africana
ENSCAPG00000006662	GNL1	98	90.485	ENSMFAG00000001167	GNL1	88	91.418	Macaca_fascicularis
ENSCAPG00000006662	GNL1	98	90.485	ENSMMUG00000020077	GNL1	88	91.418	Macaca_mulatta
ENSCAPG00000006662	GNL1	98	90.485	ENSMNEG00000031618	GNL1	88	91.418	Macaca_nemestrina
ENSCAPG00000006662	GNL1	98	90.485	ENSMLEG00000030252	GNL1	88	91.418	Mandrillus_leucophaeus
ENSCAPG00000006662	GNL1	92	57.864	ENSMAMG00000003554	gnl1	89	56.624	Mastacembelus_armatus
ENSCAPG00000006662	GNL1	92	57.227	ENSMZEG00005018216	gnl1	88	55.941	Maylandia_zebra
ENSCAPG00000006662	GNL1	98	88.082	ENSMAUG00000015596	Gnl1	88	87.523	Mesocricetus_auratus
ENSCAPG00000006662	GNL1	98	90.112	ENSMICG00000014708	GNL1	88	90.672	Microcebus_murinus
ENSCAPG00000006662	GNL1	98	89.739	ENSMOCG00000020934	Gnl1	88	90.672	Microtus_ochrogaster
ENSCAPG00000006662	GNL1	92	56.335	ENSMMOG00000015833	gnl1	88	54.727	Mola_mola
ENSCAPG00000006662	GNL1	97	79.550	ENSMODG00000015964	GNL1	83	79.550	Monodelphis_domestica
ENSCAPG00000006662	GNL1	88	57.916	ENSMALG00000022523	gnl1	89	55.717	Monopterus_albus
ENSCAPG00000006662	GNL1	98	87.313	MGP_CAROLIEiJ_G0021547	Gnl1	88	90.112	Mus_caroli
ENSCAPG00000006662	GNL1	98	89.552	ENSMUSG00000024429	Gnl1	88	90.112	Mus_musculus
ENSCAPG00000006662	GNL1	98	89.366	MGP_PahariEiJ_G0020539	Gnl1	88	90.299	Mus_pahari
ENSCAPG00000006662	GNL1	98	88.806	MGP_SPRETEiJ_G0022452	Gnl1	88	89.739	Mus_spretus
ENSCAPG00000006662	GNL1	98	89.925	ENSMPUG00000011828	GNL1	72	90.858	Mustela_putorius_furo
ENSCAPG00000006662	GNL1	98	88.290	ENSMLUG00000008722	GNL1	89	87.732	Myotis_lucifugus
ENSCAPG00000006662	GNL1	98	89.552	ENSNGAG00000000745	Gnl1	88	89.552	Nannospalax_galili
ENSCAPG00000006662	GNL1	92	57.031	ENSNBRG00000020813	gnl1	88	56.410	Neolamprologus_brichardi
ENSCAPG00000006662	GNL1	87	87.318	ENSNLEG00000005058	GNL1	69	87.318	Nomascus_leucogenys
ENSCAPG00000006662	GNL1	96	88.826	ENSOPRG00000000007	GNL1	100	89.394	Ochotona_princeps
ENSCAPG00000006662	GNL1	98	92.551	ENSODEG00000018111	GNL1	90	92.293	Octodon_degus
ENSCAPG00000006662	GNL1	92	57.422	ENSONIG00000013044	gnl1	88	56.124	Oreochromis_niloticus
ENSCAPG00000006662	GNL1	98	89.739	ENSOCUG00000002110	GNL1	88	90.672	Oryctolagus_cuniculus
ENSCAPG00000006662	GNL1	86	57.292	ENSORLG00000012862	gnl1	84	56.286	Oryzias_latipes
ENSCAPG00000006662	GNL1	86	57.708	ENSORLG00020003923	gnl1	84	56.480	Oryzias_latipes_hni
ENSCAPG00000006662	GNL1	86	57.292	ENSORLG00015009552	gnl1	84	56.093	Oryzias_latipes_hsok
ENSCAPG00000006662	GNL1	92	55.837	ENSOMEG00000014409	gnl1	88	54.197	Oryzias_melastigma
ENSCAPG00000006662	GNL1	98	90.654	ENSOGAG00000004428	-	88	91.589	Otolemur_garnettii
ENSCAPG00000006662	GNL1	96	86.095	ENSOGAG00000024106	-	88	84.190	Otolemur_garnettii
ENSCAPG00000006662	GNL1	98	89.134	ENSOARG00000012966	GNL1	88	89.871	Ovis_aries
ENSCAPG00000006662	GNL1	98	90.299	ENSPPAG00000044009	GNL1	88	91.231	Pan_paniscus
ENSCAPG00000006662	GNL1	98	90.112	ENSPPRG00000007039	GNL1	88	91.045	Panthera_pardus
ENSCAPG00000006662	GNL1	98	90.112	ENSPTIG00000011307	GNL1	88	91.045	Panthera_tigris_altaica
ENSCAPG00000006662	GNL1	97	89.869	ENSPTRG00000017928	GNL1	88	90.807	Pan_troglodytes
ENSCAPG00000006662	GNL1	98	90.485	ENSPANG00000020097	GNL1	88	91.418	Papio_anubis
ENSCAPG00000006662	GNL1	87	61.331	ENSPKIG00000002200	gnl1	88	58.780	Paramormyrops_kingsleyae
ENSCAPG00000006662	GNL1	98	55.759	ENSPSIG00000008441	GNL1	93	55.759	Pelodiscus_sinensis
ENSCAPG00000006662	GNL1	86	58.125	ENSPMGG00000007259	gnl1	88	57.116	Periophthalmus_magnuspinnatus
ENSCAPG00000006662	GNL1	98	88.993	ENSPEMG00000002731	Gnl1	91	89.552	Peromyscus_maniculatus_bairdii
ENSCAPG00000006662	GNL1	97	80.863	ENSPCIG00000014975	GNL1	88	80.863	Phascolarctos_cinereus
ENSCAPG00000006662	GNL1	86	58.787	ENSPFOG00000015398	gnl1	88	55.576	Poecilia_formosa
ENSCAPG00000006662	GNL1	86	58.787	ENSPLAG00000003231	gnl1	82	57.476	Poecilia_latipinna
ENSCAPG00000006662	GNL1	86	58.787	ENSPMEG00000005001	gnl1	88	55.576	Poecilia_mexicana
ENSCAPG00000006662	GNL1	86	58.996	ENSPREG00000012818	gnl1	88	55.576	Poecilia_reticulata
ENSCAPG00000006662	GNL1	98	90.672	ENSPPYG00000016408	GNL1	88	91.604	Pongo_abelii
ENSCAPG00000006662	GNL1	98	90.467	ENSPCOG00000015669	GNL1	88	91.402	Propithecus_coquereli
ENSCAPG00000006662	GNL1	98	89.739	ENSPVAG00000003970	GNL1	88	88.433	Pteropus_vampyrus
ENSCAPG00000006662	GNL1	92	57.031	ENSPNYG00000022614	gnl1	88	56.673	Pundamilia_nyererei
ENSCAPG00000006662	GNL1	86	60.042	ENSPNAG00000021257	gnl1	88	57.407	Pygocentrus_nattereri
ENSCAPG00000006662	GNL1	98	89.739	ENSRNOG00000000798	Gnl1	98	90.393	Rattus_norvegicus
ENSCAPG00000006662	GNL1	98	90.485	ENSRBIG00000019143	GNL1	88	91.418	Rhinopithecus_bieti
ENSCAPG00000006662	GNL1	98	90.485	ENSRROG00000030029	GNL1	88	91.418	Rhinopithecus_roxellana
ENSCAPG00000006662	GNL1	98	90.672	ENSSBOG00000031909	GNL1	88	91.604	Saimiri_boliviensis_boliviensis
ENSCAPG00000006662	GNL1	97	77.341	ENSSHAG00000007557	GNL1	88	77.154	Sarcophilus_harrisii
ENSCAPG00000006662	GNL1	86	61.996	ENSSFOG00015013921	gnl1	91	59.259	Scleropages_formosus
ENSCAPG00000006662	GNL1	90	57.114	ENSSMAG00000010147	gnl1	91	55.147	Scophthalmus_maximus
ENSCAPG00000006662	GNL1	92	56.809	ENSSDUG00000013824	gnl1	89	55.797	Seriola_dumerili
ENSCAPG00000006662	GNL1	92	57.004	ENSSLDG00000024560	gnl1	89	56.159	Seriola_lalandi_dorsalis
ENSCAPG00000006662	GNL1	63	88.382	ENSSARG00000006156	-	84	89.627	Sorex_araneus
ENSCAPG00000006662	GNL1	86	69.214	ENSSPUG00000015374	GNL1	88	65.568	Sphenodon_punctatus
ENSCAPG00000006662	GNL1	86	59.583	ENSSPAG00000017541	gnl1	89	55.898	Stegastes_partitus
ENSCAPG00000006662	GNL1	98	90.485	ENSSSCG00000001372	GNL1	88	91.418	Sus_scrofa
ENSCAPG00000006662	GNL1	97	53.514	ENSTRUG00000011226	gnl1	81	53.650	Takifugu_rubripes
ENSCAPG00000006662	GNL1	86	58.700	ENSTNIG00000008017	gnl1	79	58.071	Tetraodon_nigroviridis
ENSCAPG00000006662	GNL1	98	83.022	ENSTBEG00000007538	GNL1	88	83.955	Tupaia_belangeri
ENSCAPG00000006662	GNL1	98	88.993	ENSTTRG00000008287	GNL1	88	90.299	Tursiops_truncatus
ENSCAPG00000006662	GNL1	98	90.112	ENSUAMG00000007671	GNL1	88	91.045	Ursus_americanus
ENSCAPG00000006662	GNL1	98	85.370	ENSUMAG00000018935	GNL1	86	89.270	Ursus_maritimus
ENSCAPG00000006662	GNL1	98	89.552	ENSVVUG00000009537	GNL1	88	90.485	Vulpes_vulpes
ENSCAPG00000006662	GNL1	98	60.037	ENSXETG00000024087	gnl1	88	60.662	Xenopus_tropicalis
ENSCAPG00000006662	GNL1	87	58.557	ENSXCOG00000019185	gnl1	88	55.576	Xiphophorus_couchianus
ENSCAPG00000006662	GNL1	87	58.557	ENSXMAG00000011015	gnl1	88	55.393	Xiphophorus_maculatus