EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006768 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 11462 bases
Position: chrAVPZ01000322.1:4129979-4141440
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004190	zf-U11-48K	PF05253.12	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007761	SNRNP48-201	924	-	ENSCAPP00000004190	307 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006768's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006768	SNRNP48	100	87.987	ENSG00000168566	SNRNP48	91	88.312	Homo_sapiens
ENSCAPG00000006768	SNRNP48	72	51.965	ENSAPOG00000021430	snrnp48	87	42.857	Acanthochromis_polyacanthus
ENSCAPG00000006768	SNRNP48	99	82.911	ENSAMEG00000017349	SNRNP48	91	82.911	Ailuropoda_melanoleuca
ENSCAPG00000006768	SNRNP48	87	48.529	ENSACIG00000002032	snrnp48	86	44.164	Amphilophus_citrinellus
ENSCAPG00000006768	SNRNP48	72	51.092	ENSAOCG00000010562	snrnp48	86	43.260	Amphiprion_ocellaris
ENSCAPG00000006768	SNRNP48	72	51.101	ENSAPEG00000003231	snrnp48	86	43.218	Amphiprion_percula
ENSCAPG00000006768	SNRNP48	79	48.819	ENSATEG00000020210	snrnp48	76	48.473	Anabas_testudineus
ENSCAPG00000006768	SNRNP48	92	63.699	ENSACAG00000002811	SNRNP48	90	63.699	Anolis_carolinensis
ENSCAPG00000006768	SNRNP48	100	86.688	ENSANAG00000033538	SNRNP48	91	87.013	Aotus_nancymaae
ENSCAPG00000006768	SNRNP48	93	44.637	ENSAMXG00000015309	snrnp48	89	43.831	Astyanax_mexicanus
ENSCAPG00000006768	SNRNP48	100	82.143	ENSBTAG00000001123	SNRNP48	91	82.143	Bos_taurus
ENSCAPG00000006768	SNRNP48	100	87.013	ENSCJAG00000021330	SNRNP48	91	87.338	Callithrix_jacchus
ENSCAPG00000006768	SNRNP48	100	84.416	ENSCAFG00000009574	SNRNP48	76	84.416	Canis_familiaris
ENSCAPG00000006768	SNRNP48	100	84.416	ENSCAFG00020013203	SNRNP48	90	84.416	Canis_lupus_dingo
ENSCAPG00000006768	SNRNP48	100	84.091	ENSCHIG00000015216	SNRNP48	91	84.091	Capra_hircus
ENSCAPG00000006768	SNRNP48	100	87.013	ENSTSYG00000000698	SNRNP48	91	87.013	Carlito_syrichta
ENSCAPG00000006768	SNRNP48	100	93.485	ENSCPOG00000007910	SNRNP48	91	94.481	Cavia_porcellus
ENSCAPG00000006768	SNRNP48	99	86.275	ENSCCAG00000035652	SNRNP48	90	86.601	Cebus_capucinus
ENSCAPG00000006768	SNRNP48	100	87.013	ENSCATG00000033947	SNRNP48	91	87.338	Cercocebus_atys
ENSCAPG00000006768	SNRNP48	100	88.925	ENSCLAG00000003765	SNRNP48	91	89.935	Chinchilla_lanigera
ENSCAPG00000006768	SNRNP48	100	88.312	ENSCSAG00000007409	SNRNP48	91	88.312	Chlorocebus_sabaeus
ENSCAPG00000006768	SNRNP48	99	61.059	ENSCPBG00000019146	SNRNP48	98	61.059	Chrysemys_picta_bellii
ENSCAPG00000006768	SNRNP48	92	31.724	ENSCING00000004121	-	88	30.100	Ciona_intestinalis
ENSCAPG00000006768	SNRNP48	100	87.338	ENSCANG00000030017	SNRNP48	91	87.662	Colobus_angolensis_palliatus
ENSCAPG00000006768	SNRNP48	100	82.085	ENSCGRG00001001076	-	91	82.085	Cricetulus_griseus_chok1gshd
ENSCAPG00000006768	SNRNP48	99	67.657	ENSCGRG00001008805	-	89	66.337	Cricetulus_griseus_chok1gshd
ENSCAPG00000006768	SNRNP48	100	82.085	ENSCGRG00000007781	Snrnp48	91	82.085	Cricetulus_griseus_crigri
ENSCAPG00000006768	SNRNP48	70	51.852	ENSCSEG00000000722	snrnp48	70	47.287	Cynoglossus_semilaevis
ENSCAPG00000006768	SNRNP48	95	47.000	ENSCVAG00000019829	snrnp48	81	44.375	Cyprinodon_variegatus
ENSCAPG00000006768	SNRNP48	81	47.674	ENSDARG00000039989	snrnp48	88	44.444	Danio_rerio
ENSCAPG00000006768	SNRNP48	100	83.766	ENSDNOG00000014978	SNRNP48	91	83.766	Dasypus_novemcinctus
ENSCAPG00000006768	SNRNP48	99	84.691	ENSDORG00000015140	Snrnp48	91	84.416	Dipodomys_ordii
ENSCAPG00000006768	SNRNP48	99	85.342	ENSEASG00005012021	SNRNP48	91	85.065	Equus_asinus_asinus
ENSCAPG00000006768	SNRNP48	100	85.714	ENSECAG00000026937	SNRNP48	91	85.714	Equus_caballus
ENSCAPG00000006768	SNRNP48	99	61.564	ENSEEUG00000015437	SNRNP48	90	61.564	Erinaceus_europaeus
ENSCAPG00000006768	SNRNP48	93	46.259	ENSELUG00000009766	snrnp48	81	45.574	Esox_lucius
ENSCAPG00000006768	SNRNP48	100	85.714	ENSFCAG00000018853	SNRNP48	91	85.714	Felis_catus
ENSCAPG00000006768	SNRNP48	92	67.466	ENSFALG00000007797	SNRNP48	93	67.466	Ficedula_albicollis
ENSCAPG00000006768	SNRNP48	99	88.274	ENSFDAG00000009231	SNRNP48	91	87.987	Fukomys_damarensis
ENSCAPG00000006768	SNRNP48	65	55.446	ENSFHEG00000014647	snrnp48	97	47.000	Fundulus_heteroclitus
ENSCAPG00000006768	SNRNP48	65	50.746	ENSGMOG00000018599	-	88	44.928	Gadus_morhua
ENSCAPG00000006768	SNRNP48	85	70.111	ENSGALG00000013005	SNRNP48	92	70.111	Gallus_gallus
ENSCAPG00000006768	SNRNP48	81	48.810	ENSGAFG00000021639	snrnp48	87	45.253	Gambusia_affinis
ENSCAPG00000006768	SNRNP48	72	50.893	ENSGACG00000017756	-	90	43.902	Gasterosteus_aculeatus
ENSCAPG00000006768	SNRNP48	92	63.087	ENSGAGG00000000865	SNRNP48	97	63.087	Gopherus_agassizii
ENSCAPG00000006768	SNRNP48	100	87.662	ENSGGOG00000013220	SNRNP48	91	87.987	Gorilla_gorilla
ENSCAPG00000006768	SNRNP48	73	49.333	ENSHBUG00000017066	snrnp48	86	41.745	Haplochromis_burtoni
ENSCAPG00000006768	SNRNP48	99	89.577	ENSHGLG00000015241	SNRNP48	91	89.286	Heterocephalus_glaber_female
ENSCAPG00000006768	SNRNP48	99	89.577	ENSHGLG00100010027	SNRNP48	91	89.286	Heterocephalus_glaber_male
ENSCAPG00000006768	SNRNP48	72	47.768	ENSHCOG00000014066	snrnp48	86	42.492	Hippocampus_comes
ENSCAPG00000006768	SNRNP48	100	87.987	ENSSTOG00000014635	SNRNP48	91	87.987	Ictidomys_tridecemlineatus
ENSCAPG00000006768	SNRNP48	100	79.221	ENSJJAG00000011495	Snrnp48	91	79.221	Jaculus_jaculus
ENSCAPG00000006768	SNRNP48	83	47.471	ENSKMAG00000016514	snrnp48	86	43.137	Kryptolebias_marmoratus
ENSCAPG00000006768	SNRNP48	78	50.617	ENSLBEG00000026249	snrnp48	87	45.860	Labrus_bergylta
ENSCAPG00000006768	SNRNP48	99	53.871	ENSLACG00000003958	SNRNP48	91	52.830	Latimeria_chalumnae
ENSCAPG00000006768	SNRNP48	84	52.091	ENSLOCG00000004187	snrnp48	87	49.839	Lepisosteus_oculatus
ENSCAPG00000006768	SNRNP48	100	80.519	ENSLAFG00000011152	SNRNP48	91	80.844	Loxodonta_africana
ENSCAPG00000006768	SNRNP48	100	87.662	ENSMFAG00000045216	SNRNP48	91	87.987	Macaca_fascicularis
ENSCAPG00000006768	SNRNP48	100	87.662	ENSMMUG00000014785	SNRNP48	91	87.987	Macaca_mulatta
ENSCAPG00000006768	SNRNP48	100	87.338	ENSMNEG00000042269	SNRNP48	91	87.662	Macaca_nemestrina
ENSCAPG00000006768	SNRNP48	100	87.662	ENSMLEG00000034004	SNRNP48	91	87.987	Mandrillus_leucophaeus
ENSCAPG00000006768	SNRNP48	90	42.806	ENSMAMG00000018673	snrnp48	71	44.369	Mastacembelus_armatus
ENSCAPG00000006768	SNRNP48	91	66.781	ENSMGAG00000006037	SNRNP48	99	66.438	Meleagris_gallopavo
ENSCAPG00000006768	SNRNP48	100	82.736	ENSMAUG00000011944	Snrnp48	90	82.736	Mesocricetus_auratus
ENSCAPG00000006768	SNRNP48	100	83.766	ENSMICG00000012497	SNRNP48	91	84.091	Microcebus_murinus
ENSCAPG00000006768	SNRNP48	100	82.410	ENSMOCG00000015555	Snrnp48	90	82.410	Microtus_ochrogaster
ENSCAPG00000006768	SNRNP48	60	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSCAPG00000006768	SNRNP48	98	69.010	ENSMODG00000009996	SNRNP48	85	69.010	Monodelphis_domestica
ENSCAPG00000006768	SNRNP48	90	46.763	ENSMALG00000005725	snrnp48	82	46.831	Monopterus_albus
ENSCAPG00000006768	SNRNP48	100	83.062	MGP_CAROLIEiJ_G0018441	Snrnp48	91	83.062	Mus_caroli
ENSCAPG00000006768	SNRNP48	100	82.085	ENSMUSG00000021431	Snrnp48	91	82.085	Mus_musculus
ENSCAPG00000006768	SNRNP48	100	82.410	MGP_PahariEiJ_G0019509	Snrnp48	91	82.410	Mus_pahari
ENSCAPG00000006768	SNRNP48	100	82.085	MGP_SPRETEiJ_G0019321	Snrnp48	91	82.085	Mus_spretus
ENSCAPG00000006768	SNRNP48	99	82.353	ENSNGAG00000004849	Snrnp48	90	82.353	Nannospalax_galili
ENSCAPG00000006768	SNRNP48	73	48.889	ENSNBRG00000012127	snrnp48	86	41.745	Neolamprologus_brichardi
ENSCAPG00000006768	SNRNP48	100	87.987	ENSNLEG00000011667	SNRNP48	91	88.312	Nomascus_leucogenys
ENSCAPG00000006768	SNRNP48	95	76.289	ENSOPRG00000015471	SNRNP48	90	75.945	Ochotona_princeps
ENSCAPG00000006768	SNRNP48	73	48.889	ENSONIG00000001520	snrnp48	86	43.949	Oreochromis_niloticus
ENSCAPG00000006768	SNRNP48	89	84.559	ENSOCUG00000005168	SNRNP48	89	85.348	Oryctolagus_cuniculus
ENSCAPG00000006768	SNRNP48	88	48.375	ENSORLG00000015654	snrnp48	85	45.397	Oryzias_latipes
ENSCAPG00000006768	SNRNP48	97	43.506	ENSORLG00020015976	snrnp48	74	43.750	Oryzias_latipes_hni
ENSCAPG00000006768	SNRNP48	88	48.014	ENSORLG00015022379	snrnp48	73	45.714	Oryzias_latipes_hsok
ENSCAPG00000006768	SNRNP48	82	48.450	ENSOMEG00000022007	snrnp48	86	44.201	Oryzias_melastigma
ENSCAPG00000006768	SNRNP48	93	84.615	ENSOGAG00000005275	SNRNP48	88	84.642	Otolemur_garnettii
ENSCAPG00000006768	SNRNP48	93	86.713	ENSOARG00000017319	SNRNP48	99	86.713	Ovis_aries
ENSCAPG00000006768	SNRNP48	100	87.987	ENSPPAG00000032873	SNRNP48	91	88.312	Pan_paniscus
ENSCAPG00000006768	SNRNP48	100	85.390	ENSPPRG00000004283	SNRNP48	91	85.390	Panthera_pardus
ENSCAPG00000006768	SNRNP48	93	89.510	ENSPTIG00000013502	SNRNP48	99	89.510	Panthera_tigris_altaica
ENSCAPG00000006768	SNRNP48	100	87.987	ENSPTRG00000017703	SNRNP48	91	88.312	Pan_troglodytes
ENSCAPG00000006768	SNRNP48	100	87.662	ENSPANG00000000771	SNRNP48	91	87.987	Papio_anubis
ENSCAPG00000006768	SNRNP48	99	46.372	ENSPKIG00000013703	snrnp48	66	45.886	Paramormyrops_kingsleyae
ENSCAPG00000006768	SNRNP48	92	62.542	ENSPSIG00000002213	SNRNP48	94	62.290	Pelodiscus_sinensis
ENSCAPG00000006768	SNRNP48	91	37.993	ENSPMGG00000008120	snrnp48	73	51.442	Periophthalmus_magnuspinnatus
ENSCAPG00000006768	SNRNP48	100	82.410	ENSPEMG00000008872	Snrnp48	91	82.410	Peromyscus_maniculatus_bairdii
ENSCAPG00000006768	SNRNP48	83	48.249	ENSPFOG00000003578	snrnp48	87	44.620	Poecilia_formosa
ENSCAPG00000006768	SNRNP48	67	50.725	ENSPLAG00000002290	snrnp48	69	50.725	Poecilia_latipinna
ENSCAPG00000006768	SNRNP48	83	47.471	ENSPMEG00000018033	snrnp48	87	43.987	Poecilia_mexicana
ENSCAPG00000006768	SNRNP48	65	54.726	ENSPREG00000018541	snrnp48	87	44.410	Poecilia_reticulata
ENSCAPG00000006768	SNRNP48	100	86.364	ENSPPYG00000016209	SNRNP48	91	86.688	Pongo_abelii
ENSCAPG00000006768	SNRNP48	77	64.407	ENSPCAG00000011991	SNRNP48	88	64.407	Procavia_capensis
ENSCAPG00000006768	SNRNP48	92	88.339	ENSPVAG00000002854	SNRNP48	90	84.641	Pteropus_vampyrus
ENSCAPG00000006768	SNRNP48	73	49.778	ENSPNYG00000015399	snrnp48	87	43.478	Pundamilia_nyererei
ENSCAPG00000006768	SNRNP48	100	83.388	ENSRNOG00000013756	Snrnp48	91	83.388	Rattus_norvegicus
ENSCAPG00000006768	SNRNP48	90	88.768	ENSRBIG00000043856	SNRNP48	87	89.130	Rhinopithecus_bieti
ENSCAPG00000006768	SNRNP48	100	87.338	ENSRROG00000043229	SNRNP48	91	87.662	Rhinopithecus_roxellana
ENSCAPG00000006768	SNRNP48	100	86.688	ENSSBOG00000019486	SNRNP48	91	87.013	Saimiri_boliviensis_boliviensis
ENSCAPG00000006768	SNRNP48	99	69.085	ENSSHAG00000014483	SNRNP48	91	69.085	Sarcophilus_harrisii
ENSCAPG00000006768	SNRNP48	73	51.111	ENSSFOG00015006610	snrnp48	67	46.823	Scleropages_formosus
ENSCAPG00000006768	SNRNP48	80	50.202	ENSSDUG00000014953	snrnp48	86	44.728	Seriola_dumerili
ENSCAPG00000006768	SNRNP48	80	49.798	ENSSLDG00000005989	snrnp48	86	44.025	Seriola_lalandi_dorsalis
ENSCAPG00000006768	SNRNP48	92	64.527	ENSSPUG00000006257	SNRNP48	84	64.527	Sphenodon_punctatus
ENSCAPG00000006768	SNRNP48	79	48.016	ENSSPAG00000006454	snrnp48	87	44.951	Stegastes_partitus
ENSCAPG00000006768	SNRNP48	92	65.636	ENSTGUG00000007575	SNRNP48	93	65.636	Taeniopygia_guttata
ENSCAPG00000006768	SNRNP48	72	50.893	ENSTRUG00000007031	snrnp48	86	46.032	Takifugu_rubripes
ENSCAPG00000006768	SNRNP48	93	43.554	ENSTNIG00000012977	-	83	42.208	Tetraodon_nigroviridis
ENSCAPG00000006768	SNRNP48	100	68.608	ENSTBEG00000015620	SNRNP48	91	68.608	Tupaia_belangeri
ENSCAPG00000006768	SNRNP48	100	82.085	ENSTTRG00000016715	SNRNP48	91	83.117	Tursiops_truncatus
ENSCAPG00000006768	SNRNP48	100	86.364	ENSUAMG00000003690	SNRNP48	91	86.364	Ursus_americanus
ENSCAPG00000006768	SNRNP48	93	85.664	ENSVPAG00000003557	SNRNP48	99	85.664	Vicugna_pacos
ENSCAPG00000006768	SNRNP48	100	84.740	ENSVVUG00000004996	SNRNP48	90	84.740	Vulpes_vulpes
ENSCAPG00000006768	SNRNP48	90	55.124	ENSXETG00000020447	snrnp48	90	53.797	Xenopus_tropicalis
ENSCAPG00000006768	SNRNP48	67	50.000	ENSXCOG00000004478	snrnp48	62	50.000	Xiphophorus_couchianus
ENSCAPG00000006768	SNRNP48	76	51.709	ENSXMAG00000013595	snrnp48	87	45.253	Xiphophorus_maculatus