EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006891 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 14804 bases
Position: chrAVPZ01000078.1:30333083-30347886
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004330	PolyA_pol	PF01743.20	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007905	TRNT1-201	993	-	ENSCAPP00000004330	331 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006891	TRNT1	100	77.322	ENSG00000072756	TRNT1	86	77.322	Homo_sapiens
ENSCAPG00000006891	TRNT1	99	54.133	ENSAPOG00000013687	trnt1	88	54.133	Acanthochromis_polyacanthus
ENSCAPG00000006891	TRNT1	100	73.753	ENSAMEG00000014520	TRNT1	87	73.753	Ailuropoda_melanoleuca
ENSCAPG00000006891	TRNT1	99	54.642	ENSACIG00000021706	trnt1	88	54.642	Amphilophus_citrinellus
ENSCAPG00000006891	TRNT1	99	54.787	ENSAOCG00000024612	trnt1	88	54.787	Amphiprion_ocellaris
ENSCAPG00000006891	TRNT1	95	52.722	ENSAPEG00000022627	trnt1	83	52.722	Amphiprion_percula
ENSCAPG00000006891	TRNT1	99	55.703	ENSATEG00000008928	trnt1	93	55.703	Anabas_testudineus
ENSCAPG00000006891	TRNT1	100	61.640	ENSAPLG00000004258	TRNT1	94	61.640	Anas_platyrhynchos
ENSCAPG00000006891	TRNT1	93	68.452	ENSACAG00000005657	TRNT1	77	68.452	Anolis_carolinensis
ENSCAPG00000006891	TRNT1	100	74.603	ENSANAG00000024802	TRNT1	87	74.603	Aotus_nancymaae
ENSCAPG00000006891	TRNT1	99	55.172	ENSACLG00000022227	trnt1	88	55.172	Astatotilapia_calliptera
ENSCAPG00000006891	TRNT1	99	56.117	ENSAMXG00000003960	trnt1	87	56.117	Astyanax_mexicanus
ENSCAPG00000006891	TRNT1	100	74.603	ENSBTAG00000019534	TRNT1	87	74.603	Bos_taurus
ENSCAPG00000006891	TRNT1	99	34.606	WBGene00010089	hpo-31	88	34.606	Caenorhabditis_elegans
ENSCAPG00000006891	TRNT1	100	74.603	ENSCJAG00000015466	TRNT1	87	74.603	Callithrix_jacchus
ENSCAPG00000006891	TRNT1	100	74.074	ENSCAFG00000005985	TRNT1	87	74.074	Canis_familiaris
ENSCAPG00000006891	TRNT1	100	74.074	ENSCAFG00020014746	TRNT1	87	74.074	Canis_lupus_dingo
ENSCAPG00000006891	TRNT1	100	74.339	ENSCHIG00000007030	TRNT1	87	74.339	Capra_hircus
ENSCAPG00000006891	TRNT1	100	75.397	ENSTSYG00000013390	TRNT1	87	75.397	Carlito_syrichta
ENSCAPG00000006891	TRNT1	100	79.101	ENSCPOG00000007849	TRNT1	87	79.101	Cavia_porcellus
ENSCAPG00000006891	TRNT1	100	74.868	ENSCCAG00000002919	TRNT1	94	74.868	Cebus_capucinus
ENSCAPG00000006891	TRNT1	100	75.397	ENSCATG00000031985	TRNT1	86	75.397	Cercocebus_atys
ENSCAPG00000006891	TRNT1	100	76.455	ENSCLAG00000005186	TRNT1	87	76.455	Chinchilla_lanigera
ENSCAPG00000006891	TRNT1	100	75.661	ENSCSAG00000011052	TRNT1	87	75.661	Chlorocebus_sabaeus
ENSCAPG00000006891	TRNT1	84	89.091	ENSCHOG00000005712	TRNT1	72	89.091	Choloepus_hoffmanni
ENSCAPG00000006891	TRNT1	99	66.048	ENSCPBG00000017636	TRNT1	86	66.048	Chrysemys_picta_bellii
ENSCAPG00000006891	TRNT1	99	37.143	ENSCING00000007069	-	93	37.143	Ciona_intestinalis
ENSCAPG00000006891	TRNT1	100	37.008	ENSCSAVG00000007494	-	89	37.008	Ciona_savignyi
ENSCAPG00000006891	TRNT1	100	75.397	ENSCANG00000039030	TRNT1	87	75.397	Colobus_angolensis_palliatus
ENSCAPG00000006891	TRNT1	100	74.868	ENSCGRG00001009998	Trnt1	87	74.868	Cricetulus_griseus_chok1gshd
ENSCAPG00000006891	TRNT1	100	74.868	ENSCGRG00000013410	Trnt1	87	74.868	Cricetulus_griseus_crigri
ENSCAPG00000006891	TRNT1	99	52.785	ENSCSEG00000008157	trnt1	92	52.785	Cynoglossus_semilaevis
ENSCAPG00000006891	TRNT1	99	54.642	ENSCVAG00000019770	trnt1	89	54.642	Cyprinodon_variegatus
ENSCAPG00000006891	TRNT1	99	56.915	ENSDARG00000075297	trnt1	87	56.915	Danio_rerio
ENSCAPG00000006891	TRNT1	100	72.944	ENSDNOG00000008837	TRNT1	87	72.944	Dasypus_novemcinctus
ENSCAPG00000006891	TRNT1	100	73.280	ENSDORG00000014035	Trnt1	87	73.280	Dipodomys_ordii
ENSCAPG00000006891	TRNT1	99	38.320	FBgn0037369	CG2100	78	38.320	Drosophila_melanogaster
ENSCAPG00000006891	TRNT1	99	49.468	ENSEBUG00000012779	-	89	49.468	Eptatretus_burgeri
ENSCAPG00000006891	TRNT1	100	73.810	ENSEASG00005003577	TRNT1	87	73.810	Equus_asinus_asinus
ENSCAPG00000006891	TRNT1	100	74.074	ENSECAG00000014420	TRNT1	87	74.074	Equus_caballus
ENSCAPG00000006891	TRNT1	99	73.210	ENSEEUG00000009567	TRNT1	87	73.210	Erinaceus_europaeus
ENSCAPG00000006891	TRNT1	93	60.119	ENSELUG00000003802	trnt1	78	60.119	Esox_lucius
ENSCAPG00000006891	TRNT1	100	73.545	ENSFCAG00000026805	TRNT1	87	73.545	Felis_catus
ENSCAPG00000006891	TRNT1	100	59.524	ENSFALG00000013539	TRNT1	98	59.524	Ficedula_albicollis
ENSCAPG00000006891	TRNT1	100	76.190	ENSFDAG00000018412	TRNT1	87	76.190	Fukomys_damarensis
ENSCAPG00000006891	TRNT1	99	54.111	ENSFHEG00000019294	trnt1	89	54.111	Fundulus_heteroclitus
ENSCAPG00000006891	TRNT1	99	54.278	ENSGMOG00000007460	trnt1	88	54.278	Gadus_morhua
ENSCAPG00000006891	TRNT1	100	60.847	ENSGALG00000017368	TRNT1	87	60.847	Gallus_gallus
ENSCAPG00000006891	TRNT1	99	54.787	ENSGAFG00000008647	trnt1	88	55.053	Gambusia_affinis
ENSCAPG00000006891	TRNT1	99	53.581	ENSGACG00000011903	trnt1	94	53.581	Gasterosteus_aculeatus
ENSCAPG00000006891	TRNT1	99	66.313	ENSGAGG00000020942	TRNT1	86	66.313	Gopherus_agassizii
ENSCAPG00000006891	TRNT1	100	75.661	ENSGGOG00000015286	TRNT1	87	75.661	Gorilla_gorilla
ENSCAPG00000006891	TRNT1	99	55.172	ENSHBUG00000002797	trnt1	88	55.172	Haplochromis_burtoni
ENSCAPG00000006891	TRNT1	100	72.105	ENSHGLG00000000221	-	87	72.105	Heterocephalus_glaber_female
ENSCAPG00000006891	TRNT1	100	75.397	ENSHGLG00000003649	TRNT1	87	75.397	Heterocephalus_glaber_female
ENSCAPG00000006891	TRNT1	100	76.139	ENSHGLG00100016421	TRNT1	87	76.139	Heterocephalus_glaber_male
ENSCAPG00000006891	TRNT1	99	54.111	ENSHCOG00000010618	trnt1	88	54.111	Hippocampus_comes
ENSCAPG00000006891	TRNT1	99	56.117	ENSIPUG00000000971	trnt1	87	56.117	Ictalurus_punctatus
ENSCAPG00000006891	TRNT1	100	70.106	ENSSTOG00000000150	TRNT1	87	70.106	Ictidomys_tridecemlineatus
ENSCAPG00000006891	TRNT1	100	74.603	ENSJJAG00000018561	Trnt1	87	74.603	Jaculus_jaculus
ENSCAPG00000006891	TRNT1	99	54.787	ENSKMAG00000011307	trnt1	88	54.787	Kryptolebias_marmoratus
ENSCAPG00000006891	TRNT1	95	50.273	ENSLBEG00000019457	trnt1	85	50.273	Labrus_bergylta
ENSCAPG00000006891	TRNT1	100	60.317	ENSLACG00000013227	TRNT1	87	60.317	Latimeria_chalumnae
ENSCAPG00000006891	TRNT1	99	56.764	ENSLOCG00000011105	trnt1	86	56.764	Lepisosteus_oculatus
ENSCAPG00000006891	TRNT1	100	73.810	ENSLAFG00000023191	TRNT1	87	73.810	Loxodonta_africana
ENSCAPG00000006891	TRNT1	100	75.397	ENSMFAG00000045113	TRNT1	86	75.397	Macaca_fascicularis
ENSCAPG00000006891	TRNT1	100	75.397	ENSMMUG00000017983	TRNT1	86	75.397	Macaca_mulatta
ENSCAPG00000006891	TRNT1	100	75.397	ENSMNEG00000037805	TRNT1	86	75.397	Macaca_nemestrina
ENSCAPG00000006891	TRNT1	99	75.597	ENSMLEG00000033671	TRNT1	98	75.597	Mandrillus_leucophaeus
ENSCAPG00000006891	TRNT1	99	54.642	ENSMAMG00000023401	trnt1	88	54.642	Mastacembelus_armatus
ENSCAPG00000006891	TRNT1	99	55.172	ENSMZEG00005009141	trnt1	88	55.172	Maylandia_zebra
ENSCAPG00000006891	TRNT1	89	67.712	ENSMGAG00000009971	TRNT1	99	67.712	Meleagris_gallopavo
ENSCAPG00000006891	TRNT1	100	74.603	ENSMAUG00000020707	Trnt1	87	74.603	Mesocricetus_auratus
ENSCAPG00000006891	TRNT1	100	74.074	ENSMICG00000016615	TRNT1	87	74.074	Microcebus_murinus
ENSCAPG00000006891	TRNT1	100	74.603	ENSMOCG00000004539	Trnt1	87	74.603	Microtus_ochrogaster
ENSCAPG00000006891	TRNT1	99	54.474	ENSMMOG00000010742	trnt1	88	54.474	Mola_mola
ENSCAPG00000006891	TRNT1	99	68.966	ENSMODG00000004368	TRNT1	87	68.966	Monodelphis_domestica
ENSCAPG00000006891	TRNT1	99	53.581	ENSMALG00000008376	trnt1	88	53.581	Monopterus_albus
ENSCAPG00000006891	TRNT1	100	75.132	MGP_CAROLIEiJ_G0028698	Trnt1	87	75.132	Mus_caroli
ENSCAPG00000006891	TRNT1	100	75.132	ENSMUSG00000013736	Trnt1	87	75.132	Mus_musculus
ENSCAPG00000006891	TRNT1	100	74.603	MGP_PahariEiJ_G0022449	Trnt1	87	74.603	Mus_pahari
ENSCAPG00000006891	TRNT1	100	75.397	MGP_SPRETEiJ_G0029726	Trnt1	87	75.397	Mus_spretus
ENSCAPG00000006891	TRNT1	100	73.545	ENSMPUG00000017017	TRNT1	87	73.545	Mustela_putorius_furo
ENSCAPG00000006891	TRNT1	100	70.899	ENSMLUG00000011864	TRNT1	98	70.899	Myotis_lucifugus
ENSCAPG00000006891	TRNT1	100	75.397	ENSNGAG00000000537	Trnt1	87	75.397	Nannospalax_galili
ENSCAPG00000006891	TRNT1	75	51.351	ENSNBRG00000023606	trnt1	85	51.351	Neolamprologus_brichardi
ENSCAPG00000006891	TRNT1	100	75.397	ENSNLEG00000003226	TRNT1	87	75.397	Nomascus_leucogenys
ENSCAPG00000006891	TRNT1	99	67.905	ENSMEUG00000004684	TRNT1	87	67.905	Notamacropus_eugenii
ENSCAPG00000006891	TRNT1	100	64.835	ENSOPRG00000015067	TRNT1	98	64.835	Ochotona_princeps
ENSCAPG00000006891	TRNT1	100	76.190	ENSODEG00000007597	TRNT1	87	76.190	Octodon_degus
ENSCAPG00000006891	TRNT1	99	54.642	ENSONIG00000020273	trnt1	87	54.642	Oreochromis_niloticus
ENSCAPG00000006891	TRNT1	99	61.538	ENSOANG00000007514	TRNT1	87	61.538	Ornithorhynchus_anatinus
ENSCAPG00000006891	TRNT1	100	69.841	ENSOCUG00000008580	TRNT1	88	69.841	Oryctolagus_cuniculus
ENSCAPG00000006891	TRNT1	99	52.255	ENSORLG00000003165	trnt1	89	52.255	Oryzias_latipes
ENSCAPG00000006891	TRNT1	99	52.520	ENSORLG00020022060	trnt1	89	52.520	Oryzias_latipes_hni
ENSCAPG00000006891	TRNT1	99	51.724	ENSORLG00015018915	trnt1	88	51.724	Oryzias_latipes_hsok
ENSCAPG00000006891	TRNT1	99	51.989	ENSOMEG00000003331	trnt1	89	51.989	Oryzias_melastigma
ENSCAPG00000006891	TRNT1	100	74.074	ENSOARG00000008631	TRNT1	87	74.074	Ovis_aries
ENSCAPG00000006891	TRNT1	100	75.397	ENSPPAG00000043566	TRNT1	87	75.397	Pan_paniscus
ENSCAPG00000006891	TRNT1	100	73.545	ENSPPRG00000001327	TRNT1	87	73.545	Panthera_pardus
ENSCAPG00000006891	TRNT1	100	73.545	ENSPTIG00000011448	TRNT1	87	73.545	Panthera_tigris_altaica
ENSCAPG00000006891	TRNT1	100	75.661	ENSPTRG00000014564	TRNT1	87	75.661	Pan_troglodytes
ENSCAPG00000006891	TRNT1	100	75.397	ENSPANG00000025944	TRNT1	86	75.397	Papio_anubis
ENSCAPG00000006891	TRNT1	93	63.393	ENSPKIG00000020015	trnt1	78	63.393	Paramormyrops_kingsleyae
ENSCAPG00000006891	TRNT1	99	65.517	ENSPSIG00000017356	TRNT1	93	70.448	Pelodiscus_sinensis
ENSCAPG00000006891	TRNT1	99	54.377	ENSPMGG00000008888	trnt1	87	54.377	Periophthalmus_magnuspinnatus
ENSCAPG00000006891	TRNT1	100	75.397	ENSPEMG00000019845	Trnt1	87	75.397	Peromyscus_maniculatus_bairdii
ENSCAPG00000006891	TRNT1	99	68.700	ENSPCIG00000030436	TRNT1	87	68.700	Phascolarctos_cinereus
ENSCAPG00000006891	TRNT1	99	54.642	ENSPFOG00000006194	trnt1	88	55.053	Poecilia_formosa
ENSCAPG00000006891	TRNT1	99	54.787	ENSPLAG00000015623	trnt1	93	55.053	Poecilia_latipinna
ENSCAPG00000006891	TRNT1	99	54.787	ENSPMEG00000012216	trnt1	93	55.053	Poecilia_mexicana
ENSCAPG00000006891	TRNT1	99	55.172	ENSPREG00000021470	trnt1	89	55.438	Poecilia_reticulata
ENSCAPG00000006891	TRNT1	100	75.132	ENSPPYG00000013702	TRNT1	87	75.132	Pongo_abelii
ENSCAPG00000006891	TRNT1	100	71.958	ENSPCAG00000001951	TRNT1	99	71.958	Procavia_capensis
ENSCAPG00000006891	TRNT1	100	74.868	ENSPCOG00000022228	TRNT1	87	74.868	Propithecus_coquereli
ENSCAPG00000006891	TRNT1	100	72.222	ENSPVAG00000008784	TRNT1	98	72.222	Pteropus_vampyrus
ENSCAPG00000006891	TRNT1	99	55.172	ENSPNYG00000003120	trnt1	88	55.172	Pundamilia_nyererei
ENSCAPG00000006891	TRNT1	99	55.319	ENSPNAG00000000565	trnt1	87	55.319	Pygocentrus_nattereri
ENSCAPG00000006891	TRNT1	100	74.868	ENSRNOG00000006432	Trnt1	87	74.868	Rattus_norvegicus
ENSCAPG00000006891	TRNT1	100	72.487	ENSRBIG00000042632	TRNT1	87	72.487	Rhinopithecus_bieti
ENSCAPG00000006891	TRNT1	100	75.132	ENSRROG00000036866	TRNT1	87	75.132	Rhinopithecus_roxellana
ENSCAPG00000006891	TRNT1	100	75.132	ENSSBOG00000021208	TRNT1	87	75.132	Saimiri_boliviensis_boliviensis
ENSCAPG00000006891	TRNT1	99	69.415	ENSSHAG00000018861	TRNT1	87	69.415	Sarcophilus_harrisii
ENSCAPG00000006891	TRNT1	93	61.677	ENSSFOG00015020844	trnt1	77	61.677	Scleropages_formosus
ENSCAPG00000006891	TRNT1	99	55.053	ENSSMAG00000015432	trnt1	86	55.053	Scophthalmus_maximus
ENSCAPG00000006891	TRNT1	99	53.846	ENSSDUG00000012320	trnt1	88	53.846	Seriola_dumerili
ENSCAPG00000006891	TRNT1	66	53.252	ENSSLDG00000016463	-	90	54.622	Seriola_lalandi_dorsalis
ENSCAPG00000006891	TRNT1	99	53.846	ENSSLDG00000009325	trnt1	88	53.846	Seriola_lalandi_dorsalis
ENSCAPG00000006891	TRNT1	99	66.048	ENSSPUG00000014153	TRNT1	98	66.048	Sphenodon_punctatus
ENSCAPG00000006891	TRNT1	99	54.787	ENSSPAG00000021005	trnt1	88	54.787	Stegastes_partitus
ENSCAPG00000006891	TRNT1	100	74.868	ENSSSCG00000011529	TRNT1	87	74.868	Sus_scrofa
ENSCAPG00000006891	TRNT1	100	59.788	ENSTGUG00000010192	TRNT1	93	59.788	Taeniopygia_guttata
ENSCAPG00000006891	TRNT1	99	55.053	ENSTRUG00000001088	trnt1	88	55.053	Takifugu_rubripes
ENSCAPG00000006891	TRNT1	99	55.703	ENSTNIG00000007363	trnt1	87	55.703	Tetraodon_nigroviridis
ENSCAPG00000006891	TRNT1	79	43.919	ENSTBEG00000006367	TRNT1	82	43.919	Tupaia_belangeri
ENSCAPG00000006891	TRNT1	100	74.074	ENSTTRG00000007803	TRNT1	87	74.074	Tursiops_truncatus
ENSCAPG00000006891	TRNT1	100	73.879	ENSUAMG00000022574	TRNT1	87	73.879	Ursus_americanus
ENSCAPG00000006891	TRNT1	100	74.406	ENSUMAG00000024092	TRNT1	87	74.406	Ursus_maritimus
ENSCAPG00000006891	TRNT1	100	74.339	ENSVVUG00000012810	TRNT1	87	74.339	Vulpes_vulpes
ENSCAPG00000006891	TRNT1	99	54.400	ENSXETG00000025091	trnt1	93	54.400	Xenopus_tropicalis
ENSCAPG00000006891	TRNT1	99	54.111	ENSXCOG00000010150	trnt1	89	54.377	Xiphophorus_couchianus
ENSCAPG00000006891	TRNT1	99	54.111	ENSXMAG00000002227	trnt1	88	54.521	Xiphophorus_maculatus