EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000006948 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 98292 bases
Position: chrAVPZ01000001.1:33593380-33691671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004389	MRP-S35	PF10246.9	3.7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000007964	-	321	-	ENSCAPP00000004389	106 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000006948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000006948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000006948	-	95	82.857	ENSG00000147586	MRPS28	99	83.333	Homo_sapiens
ENSCAPG00000006948	-	82	65.934	ENSAPOG00000007350	mrps28	77	65.934	Acanthochromis_polyacanthus
ENSCAPG00000006948	-	94	83.654	ENSAMEG00000017516	MRPS28	90	83.654	Ailuropoda_melanoleuca
ENSCAPG00000006948	-	91	66.667	ENSACIG00000007839	mrps28	57	66.667	Amphilophus_citrinellus
ENSCAPG00000006948	-	91	66.000	ENSAOCG00000000705	mrps28	58	66.000	Amphiprion_ocellaris
ENSCAPG00000006948	-	91	67.000	ENSAPEG00000016051	mrps28	58	67.000	Amphiprion_percula
ENSCAPG00000006948	-	90	68.367	ENSATEG00000015295	mrps28	54	68.367	Anabas_testudineus
ENSCAPG00000006948	-	91	78.000	ENSAPLG00000005666	MRPS28	93	78.000	Anas_platyrhynchos
ENSCAPG00000006948	-	91	63.636	ENSACLG00000003892	mrps28	86	63.636	Astatotilapia_calliptera
ENSCAPG00000006948	-	91	75.000	ENSAMXG00000026324	mrps28	54	75.000	Astyanax_mexicanus
ENSCAPG00000006948	-	94	84.615	ENSBTAG00000001302	MRPS28	55	84.615	Bos_taurus
ENSCAPG00000006948	-	81	50.000	WBGene00012830	mrps-28	52	50.000	Caenorhabditis_elegans
ENSCAPG00000006948	-	89	83.673	ENSCAFG00000008393	MRPS28	54	83.673	Canis_familiaris
ENSCAPG00000006948	-	89	83.673	ENSCAFG00020017987	MRPS28	54	83.673	Canis_lupus_dingo
ENSCAPG00000006948	-	95	84.762	ENSCHIG00000018727	MRPS28	56	84.762	Capra_hircus
ENSCAPG00000006948	-	95	75.238	ENSTSYG00000031343	-	58	75.238	Carlito_syrichta
ENSCAPG00000006948	-	100	99.057	ENSCPOG00000031885	-	100	99.057	Cavia_porcellus
ENSCAPG00000006948	-	95	82.857	ENSCCAG00000022534	MRPS28	80	81.633	Cebus_capucinus
ENSCAPG00000006948	-	100	83.636	ENSCLAG00000003227	-	100	83.636	Chinchilla_lanigera
ENSCAPG00000006948	-	95	86.667	ENSCHOG00000004885	MRPS28	58	86.667	Choloepus_hoffmanni
ENSCAPG00000006948	-	91	75.000	ENSCPBG00000007206	MRPS28	50	75.000	Chrysemys_picta_bellii
ENSCAPG00000006948	-	95	83.810	ENSCGRG00001018741	Mrps28	56	83.810	Cricetulus_griseus_chok1gshd
ENSCAPG00000006948	-	95	81.905	ENSCGRG00000018208	Mrps28	91	81.905	Cricetulus_griseus_crigri
ENSCAPG00000006948	-	86	65.263	ENSCSEG00000020947	mrps28	90	65.263	Cynoglossus_semilaevis
ENSCAPG00000006948	-	86	52.632	ENSCVAG00000007159	mrps28	82	52.632	Cyprinodon_variegatus
ENSCAPG00000006948	-	85	67.021	ENSDARG00000041538	mrps28	53	67.021	Danio_rerio
ENSCAPG00000006948	-	95	81.905	ENSDORG00000002762	Mrps28	57	81.905	Dipodomys_ordii
ENSCAPG00000006948	-	99	50.459	FBgn0034361	mRpS28	56	50.459	Drosophila_melanogaster
ENSCAPG00000006948	-	83	71.739	ENSEBUG00000010846	mrps28	54	71.739	Eptatretus_burgeri
ENSCAPG00000006948	-	95	82.857	ENSEASG00005020574	MRPS28	56	82.857	Equus_asinus_asinus
ENSCAPG00000006948	-	95	83.810	ENSECAG00000015430	MRPS28	56	83.810	Equus_caballus
ENSCAPG00000006948	-	94	83.654	ENSFCAG00000032510	MRPS28	56	83.654	Felis_catus
ENSCAPG00000006948	-	91	78.000	ENSFALG00000008608	MRPS28	76	78.000	Ficedula_albicollis
ENSCAPG00000006948	-	100	82.727	ENSFDAG00000013634	MRPS28	58	82.727	Fukomys_damarensis
ENSCAPG00000006948	-	88	53.608	ENSFHEG00000006233	mrps28	77	53.608	Fundulus_heteroclitus
ENSCAPG00000006948	-	84	58.065	ENSGAFG00000014759	mrps28	51	58.065	Gambusia_affinis
ENSCAPG00000006948	-	92	64.356	ENSGACG00000019939	mrps28	54	64.356	Gasterosteus_aculeatus
ENSCAPG00000006948	-	91	75.000	ENSGAGG00000025904	MRPS28	58	75.000	Gopherus_agassizii
ENSCAPG00000006948	-	91	63.636	ENSHBUG00000014315	mrps28	85	63.636	Haplochromis_burtoni
ENSCAPG00000006948	-	83	63.441	ENSHCOG00000011561	mrps28	53	63.441	Hippocampus_comes
ENSCAPG00000006948	-	90	69.697	ENSIPUG00000012566	mrps28	54	69.697	Ictalurus_punctatus
ENSCAPG00000006948	-	95	64.220	ENSKMAG00000006636	mrps28	58	64.220	Kryptolebias_marmoratus
ENSCAPG00000006948	-	91	70.000	ENSLACG00000014702	MRPS28	53	70.000	Latimeria_chalumnae
ENSCAPG00000006948	-	91	75.000	ENSLOCG00000017359	mrps28	52	75.000	Lepisosteus_oculatus
ENSCAPG00000006948	-	91	64.356	ENSMAMG00000017782	mrps28	88	64.356	Mastacembelus_armatus
ENSCAPG00000006948	-	91	63.636	ENSMZEG00005010529	-	86	63.636	Maylandia_zebra
ENSCAPG00000006948	-	91	63.636	ENSMZEG00005014997	mrps28	86	63.636	Maylandia_zebra
ENSCAPG00000006948	-	90	76.768	ENSMGAG00000011622	MRPS28	95	76.768	Meleagris_gallopavo
ENSCAPG00000006948	-	95	86.667	ENSMAUG00000009465	Mrps28	56	86.667	Mesocricetus_auratus
ENSCAPG00000006948	-	95	86.667	ENSMICG00000044873	MRPS28	57	86.667	Microcebus_murinus
ENSCAPG00000006948	-	95	83.810	ENSMOCG00000021930	Mrps28	56	83.810	Microtus_ochrogaster
ENSCAPG00000006948	-	91	83.000	ENSMODG00000006621	MRPS28	53	83.000	Monodelphis_domestica
ENSCAPG00000006948	-	94	68.932	ENSMALG00000006494	mrps28	79	68.932	Monopterus_albus
ENSCAPG00000006948	-	95	81.905	MGP_CAROLIEiJ_G0024833	Mrps28	56	81.905	Mus_caroli
ENSCAPG00000006948	-	95	80.952	ENSMUSG00000040269	Mrps28	56	80.952	Mus_musculus
ENSCAPG00000006948	-	95	81.905	MGP_PahariEiJ_G0026281	Mrps28	56	81.905	Mus_pahari
ENSCAPG00000006948	-	95	80.952	MGP_SPRETEiJ_G0025763	Mrps28	56	80.952	Mus_spretus
ENSCAPG00000006948	-	94	83.654	ENSMPUG00000001853	MRPS28	56	83.654	Mustela_putorius_furo
ENSCAPG00000006948	-	94	77.885	ENSMLUG00000015175	MRPS28	56	77.885	Myotis_lucifugus
ENSCAPG00000006948	-	95	81.905	ENSNGAG00000000216	Mrps28	56	81.905	Nannospalax_galili
ENSCAPG00000006948	-	86	67.021	ENSNBRG00000021393	mrps28	57	63.636	Neolamprologus_brichardi
ENSCAPG00000006948	-	92	79.000	ENSMEUG00000007676	MRPS28	56	79.000	Notamacropus_eugenii
ENSCAPG00000006948	-	96	85.849	ENSODEG00000005701	MRPS28	57	85.849	Octodon_degus
ENSCAPG00000006948	-	91	64.646	ENSONIG00000020758	mrps28	57	64.646	Oreochromis_niloticus
ENSCAPG00000006948	-	92	85.294	ENSOCUG00000000867	MRPS28	58	85.294	Oryctolagus_cuniculus
ENSCAPG00000006948	-	91	64.000	ENSORLG00000026843	mrps28	56	64.000	Oryzias_latipes
ENSCAPG00000006948	-	91	65.000	ENSORLG00020022089	mrps28	56	65.000	Oryzias_latipes_hni
ENSCAPG00000006948	-	91	59.000	ENSOMEG00000008250	mrps28	57	59.000	Oryzias_melastigma
ENSCAPG00000006948	-	95	85.714	ENSOGAG00000016599	MRPS28	56	85.714	Otolemur_garnettii
ENSCAPG00000006948	-	94	84.615	ENSPPRG00000009220	MRPS28	56	84.615	Panthera_pardus
ENSCAPG00000006948	-	94	83.654	ENSPTIG00000019934	MRPS28	56	83.654	Panthera_tigris_altaica
ENSCAPG00000006948	-	91	71.000	ENSPKIG00000022304	mrps28	80	71.000	Paramormyrops_kingsleyae
ENSCAPG00000006948	-	84	63.736	ENSPMGG00000008007	-	51	63.736	Periophthalmus_magnuspinnatus
ENSCAPG00000006948	-	95	81.905	ENSPEMG00000012338	Mrps28	56	81.905	Peromyscus_maniculatus_bairdii
ENSCAPG00000006948	-	88	72.165	ENSPMAG00000002015	mrps28	87	72.165	Petromyzon_marinus
ENSCAPG00000006948	-	91	79.000	ENSPCIG00000026795	MRPS28	54	79.000	Phascolarctos_cinereus
ENSCAPG00000006948	-	84	58.065	ENSPFOG00000020828	mrps28	55	56.842	Poecilia_formosa
ENSCAPG00000006948	-	84	58.065	ENSPLAG00000005387	mrps28	55	56.842	Poecilia_latipinna
ENSCAPG00000006948	-	76	62.353	ENSPMEG00000022332	mrps28	52	62.353	Poecilia_mexicana
ENSCAPG00000006948	-	86	56.842	ENSPREG00000005690	mrps28	56	56.842	Poecilia_reticulata
ENSCAPG00000006948	-	95	80.952	ENSPPYG00000018694	MRPS28	58	80.952	Pongo_abelii
ENSCAPG00000006948	-	95	81.905	ENSPCAG00000000404	MRPS28	91	81.905	Procavia_capensis
ENSCAPG00000006948	-	95	86.667	ENSPCOG00000003866	MRPS28	57	86.667	Propithecus_coquereli
ENSCAPG00000006948	-	92	82.178	ENSPVAG00000007815	MRPS28	56	82.178	Pteropus_vampyrus
ENSCAPG00000006948	-	91	63.636	ENSPNYG00000016499	mrps28	86	63.636	Pundamilia_nyererei
ENSCAPG00000006948	-	91	71.000	ENSPNAG00000018621	mrps28	54	71.000	Pygocentrus_nattereri
ENSCAPG00000006948	-	96	83.019	ENSRNOG00000032630	Mrps28	57	83.019	Rattus_norvegicus
ENSCAPG00000006948	-	95	82.857	ENSSBOG00000028198	MRPS28	80	80.808	Saimiri_boliviensis_boliviensis
ENSCAPG00000006948	-	92	70.297	ENSSFOG00015004723	mrps28	50	70.297	Scleropages_formosus
ENSCAPG00000006948	-	89	65.306	ENSSMAG00000021042	mrps28	57	65.306	Scophthalmus_maximus
ENSCAPG00000006948	-	85	69.149	ENSSDUG00000021722	mrps28	52	69.149	Seriola_dumerili
ENSCAPG00000006948	-	81	70.000	ENSSLDG00000013261	mrps28	52	68.041	Seriola_lalandi_dorsalis
ENSCAPG00000006948	-	95	81.905	ENSSARG00000007429	MRPS28	56	81.905	Sorex_araneus
ENSCAPG00000006948	-	91	71.000	ENSSPUG00000017502	MRPS28	59	71.000	Sphenodon_punctatus
ENSCAPG00000006948	-	91	63.000	ENSSPAG00000003194	mrps28	57	63.000	Stegastes_partitus
ENSCAPG00000006948	-	95	83.810	ENSSSCG00000037782	MRPS28	56	83.810	Sus_scrofa
ENSCAPG00000006948	-	94	80.769	ENSTBEG00000010380	MRPS28	58	80.769	Tupaia_belangeri
ENSCAPG00000006948	-	95	82.857	ENSTTRG00000000087	MRPS28	58	82.857	Tursiops_truncatus
ENSCAPG00000006948	-	94	84.615	ENSUAMG00000018127	MRPS28	56	84.615	Ursus_americanus
ENSCAPG00000006948	-	94	84.615	ENSUMAG00000014927	MRPS28	56	84.615	Ursus_maritimus
ENSCAPG00000006948	-	95	85.714	ENSVPAG00000000652	MRPS28	58	85.714	Vicugna_pacos
ENSCAPG00000006948	-	89	83.673	ENSVVUG00000000384	MRPS28	55	83.673	Vulpes_vulpes