EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000007230 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 32219 bases
Position: chrAVPZ01000067.1:18463583-18495801
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004775	GUCT	PF08152.12	7.6e-14	1	1
ENSCAPP00000004775	ResIII	PF04851.15	1.6e-10	1	1
ENSCAPP00000004775	DEAD	PF00270.29	9.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000008353	-	1854	-	ENSCAPP00000004775	617 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000007230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000007230	-	54	31.070	ENSCAPG00000010800	DDX27	51	30.026
ENSCAPG00000007230	-	86	54.482	ENSCAPG00000005945	DDX21	71	57.143
ENSCAPG00000007230	-	52	32.979	ENSCAPG00000004039	DDX18	61	32.979
ENSCAPG00000007230	-	50	32.033	ENSCAPG00000011375	DDX41	68	31.944
ENSCAPG00000007230	-	51	31.522	ENSCAPG00000010945	-	53	32.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000007230	-	87	79.231	ENSG00000107625	DDX50	91	76.855	Homo_sapiens
ENSCAPG00000007230	-	88	78.321	ENSAMEG00000017992	DDX50	88	78.362	Ailuropoda_melanoleuca
ENSCAPG00000007230	-	97	70.851	ENSANAG00000017785	-	86	91.753	Aotus_nancymaae
ENSCAPG00000007230	-	97	79.831	ENSBTAG00000033413	DDX50	88	78.793	Bos_taurus
ENSCAPG00000007230	-	92	80.621	ENSCJAG00000018844	DDX50	93	80.621	Callithrix_jacchus
ENSCAPG00000007230	-	88	78.779	ENSCAFG00000013776	DDX50	94	78.825	Canis_familiaris
ENSCAPG00000007230	-	88	78.779	ENSCAFG00020025977	DDX50	88	78.825	Canis_lupus_dingo
ENSCAPG00000007230	-	97	79.690	ENSCHIG00000000285	DDX50	88	78.638	Capra_hircus
ENSCAPG00000007230	-	87	78.615	ENSTSYG00000004192	DDX50	91	76.261	Carlito_syrichta
ENSCAPG00000007230	-	97	83.593	ENSCPOG00000002131	-	96	83.593	Cavia_porcellus
ENSCAPG00000007230	-	87	88.766	ENSCCAG00000030543	DDX50	93	82.573	Cebus_capucinus
ENSCAPG00000007230	-	97	58.126	ENSCATG00000039259	-	85	57.971	Cercocebus_atys
ENSCAPG00000007230	-	94	57.372	ENSCATG00000035153	-	89	57.188	Cercocebus_atys
ENSCAPG00000007230	-	90	80.422	ENSCATG00000032463	DDX50	93	80.422	Cercocebus_atys
ENSCAPG00000007230	-	97	60.819	ENSCLAG00000001938	-	90	60.225	Chinchilla_lanigera
ENSCAPG00000007230	-	100	80.027	ENSCLAG00000012957	-	100	80.027	Chinchilla_lanigera
ENSCAPG00000007230	-	87	79.231	ENSCSAG00000007703	DDX50	91	76.855	Chlorocebus_sabaeus
ENSCAPG00000007230	-	87	76.733	ENSCHOG00000000233	DDX50	97	76.744	Choloepus_hoffmanni
ENSCAPG00000007230	-	87	63.692	ENSCANG00000036450	-	87	63.622	Colobus_angolensis_palliatus
ENSCAPG00000007230	-	92	55.994	ENSCANG00000028077	-	86	55.217	Colobus_angolensis_palliatus
ENSCAPG00000007230	-	85	59.032	ENSCANG00000018820	-	88	58.602	Colobus_angolensis_palliatus
ENSCAPG00000007230	-	87	77.350	ENSCGRG00001020223	Ddx50	91	75.186	Cricetulus_griseus_chok1gshd
ENSCAPG00000007230	-	87	77.245	ENSCGRG00000015884	Ddx50	92	75.186	Cricetulus_griseus_crigri
ENSCAPG00000007230	-	81	73.934	ENSDNOG00000001675	DDX50	96	74.110	Dasypus_novemcinctus
ENSCAPG00000007230	-	87	78.462	ENSDORG00000007310	Ddx50	88	78.483	Dipodomys_ordii
ENSCAPG00000007230	-	76	86.486	ENSETEG00000014069	DDX50	82	77.934	Echinops_telfairi
ENSCAPG00000007230	-	88	78.287	ENSEASG00005015595	DDX50	88	78.328	Equus_asinus_asinus
ENSCAPG00000007230	-	88	78.440	ENSECAG00000023044	DDX50	88	78.483	Equus_caballus
ENSCAPG00000007230	-	83	76.997	ENSEEUG00000005782	DDX50	85	76.997	Erinaceus_europaeus
ENSCAPG00000007230	-	87	78.802	ENSFCAG00000012678	DDX50	88	78.825	Felis_catus
ENSCAPG00000007230	-	87	80.128	ENSFDAG00000016109	-	91	77.623	Fukomys_damarensis
ENSCAPG00000007230	-	87	79.231	ENSGGOG00000010100	DDX50	91	76.855	Gorilla_gorilla
ENSCAPG00000007230	-	87	78.462	ENSHGLG00000013466	DDX50	91	76.226	Heterocephalus_glaber_female
ENSCAPG00000007230	-	87	78.462	ENSHGLG00100017191	DDX50	91	76.226	Heterocephalus_glaber_male
ENSCAPG00000007230	-	87	64.892	ENSHGLG00100006568	-	89	64.765	Heterocephalus_glaber_male
ENSCAPG00000007230	-	100	77.507	ENSSTOG00000021852	-	100	77.507	Ictidomys_tridecemlineatus
ENSCAPG00000007230	-	96	61.974	ENSJJAG00000019626	-	86	61.238	Jaculus_jaculus
ENSCAPG00000007230	-	97	78.561	ENSJJAG00000023928	-	88	77.364	Jaculus_jaculus
ENSCAPG00000007230	-	100	77.612	ENSLAFG00000006186	DDX50	100	77.612	Loxodonta_africana
ENSCAPG00000007230	-	90	80.435	ENSMFAG00000044067	DDX50	93	80.435	Macaca_fascicularis
ENSCAPG00000007230	-	94	57.018	ENSMFAG00000045339	-	89	56.964	Macaca_fascicularis
ENSCAPG00000007230	-	91	81.722	ENSMMUG00000001006	DDX50	100	80.655	Macaca_mulatta
ENSCAPG00000007230	-	87	59.543	ENSMMUG00000045343	-	80	58.813	Macaca_mulatta
ENSCAPG00000007230	-	90	79.592	ENSMNEG00000031664	DDX50	93	79.592	Macaca_nemestrina
ENSCAPG00000007230	-	94	58.370	ENSMNEG00000045530	-	89	58.567	Macaca_nemestrina
ENSCAPG00000007230	-	90	78.614	ENSMLEG00000037313	DDX50	93	78.614	Mandrillus_leucophaeus
ENSCAPG00000007230	-	80	65.537	ENSMLEG00000041988	-	83	64.972	Mandrillus_leucophaeus
ENSCAPG00000007230	-	57	87.879	ENSMAUG00000022192	Ddx50	88	87.879	Mesocricetus_auratus
ENSCAPG00000007230	-	87	69.954	ENSMICG00000017539	DDX50	91	68.101	Microcebus_murinus
ENSCAPG00000007230	-	87	77.761	ENSMOCG00000001676	Ddx50	91	75.592	Microtus_ochrogaster
ENSCAPG00000007230	-	87	66.154	ENSMODG00000010741	DDX50	87	67.127	Monodelphis_domestica
ENSCAPG00000007230	-	87	77.042	MGP_CAROLIEiJ_G0015389	Ddx50	91	74.889	Mus_caroli
ENSCAPG00000007230	-	87	77.504	ENSMUSG00000020076	Ddx50	91	75.334	Mus_musculus
ENSCAPG00000007230	-	87	77.658	MGP_PahariEiJ_G0030805	Ddx50	91	75.483	Mus_pahari
ENSCAPG00000007230	-	87	77.504	MGP_SPRETEiJ_G0016200	Ddx50	91	75.334	Mus_spretus
ENSCAPG00000007230	-	82	77.706	ENSMPUG00000004589	DDX50	96	77.706	Mustela_putorius_furo
ENSCAPG00000007230	-	87	78.858	ENSMLUG00000017590	DDX50	88	78.882	Myotis_lucifugus
ENSCAPG00000007230	-	97	80.536	ENSNGAG00000004283	Ddx50	96	80.536	Nannospalax_galili
ENSCAPG00000007230	-	90	80.422	ENSNLEG00000011631	DDX50	93	80.422	Nomascus_leucogenys
ENSCAPG00000007230	-	88	57.211	ENSNLEG00000035506	-	86	57.904	Nomascus_leucogenys
ENSCAPG00000007230	-	87	76.389	ENSOPRG00000001619	DDX50	88	76.242	Ochotona_princeps
ENSCAPG00000007230	-	87	79.661	ENSODEG00000014597	-	91	77.266	Octodon_degus
ENSCAPG00000007230	-	94	57.307	ENSOANG00000004776	DDX50	74	60.477	Ornithorhynchus_anatinus
ENSCAPG00000007230	-	89	76.818	ENSOCUG00000002879	DDX50	90	77.984	Oryctolagus_cuniculus
ENSCAPG00000007230	-	87	78.308	ENSOGAG00000001844	DDX50	91	75.964	Otolemur_garnettii
ENSCAPG00000007230	-	97	79.831	ENSOARG00000005264	DDX50	88	78.793	Ovis_aries
ENSCAPG00000007230	-	100	78.290	ENSPPAG00000040723	DDX50	100	78.290	Pan_paniscus
ENSCAPG00000007230	-	90	80.060	ENSPPRG00000015826	DDX50	93	80.060	Panthera_pardus
ENSCAPG00000007230	-	90	80.060	ENSPTIG00000008454	DDX50	93	80.060	Panthera_tigris_altaica
ENSCAPG00000007230	-	100	78.290	ENSPTRG00000002562	DDX50	100	78.290	Pan_troglodytes
ENSCAPG00000007230	-	87	71.077	ENSPANG00000022143	-	91	68.991	Papio_anubis
ENSCAPG00000007230	-	87	77.042	ENSPEMG00000020899	-	88	77.054	Peromyscus_maniculatus_bairdii
ENSCAPG00000007230	-	86	70.952	ENSPCIG00000016036	DDX50	91	66.822	Phascolarctos_cinereus
ENSCAPG00000007230	-	91	80.655	ENSPPYG00000002390	DDX50	100	80.655	Pongo_abelii
ENSCAPG00000007230	-	82	70.617	ENSPCAG00000009692	DDX50	100	70.617	Procavia_capensis
ENSCAPG00000007230	-	76	84.615	ENSPCOG00000012574	DDX50	90	83.607	Propithecus_coquereli
ENSCAPG00000007230	-	87	92.836	ENSPVAG00000009519	DDX50	82	93.731	Pteropus_vampyrus
ENSCAPG00000007230	-	87	77.350	ENSRNOG00000000396	Ddx50	91	75.186	Rattus_norvegicus
ENSCAPG00000007230	-	97	59.181	ENSRBIG00000039673	-	84	58.124	Rhinopithecus_bieti
ENSCAPG00000007230	-	95	58.876	ENSRBIG00000036573	-	89	56.661	Rhinopithecus_bieti
ENSCAPG00000007230	-	82	78.120	ENSRBIG00000042841	-	98	78.028	Rhinopithecus_bieti
ENSCAPG00000007230	-	95	55.869	ENSRROG00000022853	-	86	55.993	Rhinopithecus_roxellana
ENSCAPG00000007230	-	91	80.477	ENSRROG00000032158	DDX50	99	80.568	Rhinopithecus_roxellana
ENSCAPG00000007230	-	87	74.430	ENSSBOG00000014441	DDX50	99	72.559	Saimiri_boliviensis_boliviensis
ENSCAPG00000007230	-	87	65.741	ENSSHAG00000005690	DDX50	90	66.821	Sarcophilus_harrisii
ENSCAPG00000007230	-	75	56.367	ENSSHAG00000005334	-	78	55.892	Sarcophilus_harrisii
ENSCAPG00000007230	-	82	77.472	ENSSARG00000013553	DDX50	84	77.472	Sorex_araneus
ENSCAPG00000007230	-	97	78.843	ENSSSCG00000010246	DDX50	88	77.399	Sus_scrofa
ENSCAPG00000007230	-	85	80.124	ENSTBEG00000001085	DDX50	76	76.613	Tupaia_belangeri
ENSCAPG00000007230	-	87	72.222	ENSTTRG00000012408	DDX50	88	72.205	Tursiops_truncatus
ENSCAPG00000007230	-	90	79.730	ENSUAMG00000010976	DDX50	99	78.669	Ursus_americanus
ENSCAPG00000007230	-	88	78.626	ENSUMAG00000007726	DDX50	88	78.671	Ursus_maritimus
ENSCAPG00000007230	-	87	78.154	ENSVPAG00000000626	DDX50	88	78.173	Vicugna_pacos
ENSCAPG00000007230	-	80	71.642	ENSVVUG00000020366	DDX50	97	73.549	Vulpes_vulpes