EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000007240 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 1705 bases
Position: chrAVPZ01000274.1:52727-54431
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004771	RRM_1	PF00076.22	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000008349	PABPN1L-201	801	-	ENSCAPP00000004771	267 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000007240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000007240	PABPN1L	100	65.934	ENSG00000205022	PABPN1L	95	65.809	Homo_sapiens
ENSCAPG00000007240	PABPN1L	53	56.667	ENSACIG00000021400	PABPN1L	84	56.667	Amphilophus_citrinellus
ENSCAPG00000007240	PABPN1L	55	56.129	ENSATEG00000011646	PABPN1L	74	49.735	Anabas_testudineus
ENSCAPG00000007240	PABPN1L	68	54.396	ENSACAG00000013250	PABPN1L	92	53.846	Anolis_carolinensis
ENSCAPG00000007240	PABPN1L	100	63.469	ENSANAG00000038178	PABPN1L	95	62.593	Aotus_nancymaae
ENSCAPG00000007240	PABPN1L	55	55.484	ENSACLG00000025147	PABPN1L	70	48.936	Astatotilapia_calliptera
ENSCAPG00000007240	PABPN1L	56	52.349	ENSAMXG00000010873	PABPN1L	58	53.548	Astyanax_mexicanus
ENSCAPG00000007240	PABPN1L	97	61.364	ENSBTAG00000023752	-	95	61.905	Bos_taurus
ENSCAPG00000007240	PABPN1L	100	63.333	ENSCJAG00000045284	PABPN1L	95	64.207	Callithrix_jacchus
ENSCAPG00000007240	PABPN1L	100	62.593	ENSCHIG00000013987	PABPN1L	92	61.111	Capra_hircus
ENSCAPG00000007240	PABPN1L	100	96.255	ENSCPOG00000025951	PABPN1L	95	96.255	Cavia_porcellus
ENSCAPG00000007240	PABPN1L	100	64.815	ENSCCAG00000027631	PABPN1L	95	64.576	Cebus_capucinus
ENSCAPG00000007240	PABPN1L	100	65.428	ENSCATG00000031060	PABPN1L	95	66.171	Cercocebus_atys
ENSCAPG00000007240	PABPN1L	97	82.308	ENSCLAG00000000704	PABPN1L	95	81.273	Chinchilla_lanigera
ENSCAPG00000007240	PABPN1L	100	63.509	ENSCSAG00000002881	PABPN1L	95	63.509	Chlorocebus_sabaeus
ENSCAPG00000007240	PABPN1L	60	61.350	ENSCPBG00000023441	PABPN1L	56	55.738	Chrysemys_picta_bellii
ENSCAPG00000007240	PABPN1L	100	65.185	ENSCANG00000039336	PABPN1L	95	64.815	Colobus_angolensis_palliatus
ENSCAPG00000007240	PABPN1L	100	66.543	ENSCGRG00001013211	Pabpn1l	95	66.171	Cricetulus_griseus_chok1gshd
ENSCAPG00000007240	PABPN1L	100	66.543	ENSCGRG00000015868	Pabpn1l	95	66.171	Cricetulus_griseus_crigri
ENSCAPG00000007240	PABPN1L	88	58.704	ENSDNOG00000034677	PABPN1L	97	56.410	Dasypus_novemcinctus
ENSCAPG00000007240	PABPN1L	100	68.864	ENSEASG00005000777	PABPN1L	99	68.498	Equus_asinus_asinus
ENSCAPG00000007240	PABPN1L	100	67.778	ENSECAG00000000378	PABPN1L	96	65.799	Equus_caballus
ENSCAPG00000007240	PABPN1L	100	56.180	ENSEEUG00000004747	PABPN1L	94	56.180	Erinaceus_europaeus
ENSCAPG00000007240	PABPN1L	97	64.773	ENSFCAG00000010465	PABPN1L	95	64.469	Felis_catus
ENSCAPG00000007240	PABPN1L	60	60.625	ENSFALG00000003319	PABPN1L	63	59.375	Ficedula_albicollis
ENSCAPG00000007240	PABPN1L	100	77.941	ENSFDAG00000021067	PABPN1L	97	77.206	Fukomys_damarensis
ENSCAPG00000007240	PABPN1L	64	47.486	ENSGACG00000015428	PABPN1L	67	47.568	Gasterosteus_aculeatus
ENSCAPG00000007240	PABPN1L	67	57.459	ENSGAGG00000010613	PABPN1L	59	55.249	Gopherus_agassizii
ENSCAPG00000007240	PABPN1L	100	65.428	ENSGGOG00000012670	PABPN1L	95	66.543	Gorilla_gorilla
ENSCAPG00000007240	PABPN1L	55	55.484	ENSHBUG00000002388	PABPN1L	70	48.404	Haplochromis_burtoni
ENSCAPG00000007240	PABPN1L	100	78.652	ENSHGLG00000014207	PABPN1L	99	78.277	Heterocephalus_glaber_female
ENSCAPG00000007240	PABPN1L	100	78.652	ENSHGLG00100005230	PABPN1L	99	78.277	Heterocephalus_glaber_male
ENSCAPG00000007240	PABPN1L	99	67.279	ENSSTOG00000020814	PABPN1L	96	67.279	Ictidomys_tridecemlineatus
ENSCAPG00000007240	PABPN1L	100	63.433	ENSJJAG00000006433	Pabpn1l	94	63.806	Jaculus_jaculus
ENSCAPG00000007240	PABPN1L	67	65.922	ENSLAFG00000025902	-	71	65.922	Loxodonta_africana
ENSCAPG00000007240	PABPN1L	100	65.428	ENSMFAG00000002924	PABPN1L	95	66.171	Macaca_fascicularis
ENSCAPG00000007240	PABPN1L	100	64.684	ENSMMUG00000012438	PABPN1L	95	65.428	Macaca_mulatta
ENSCAPG00000007240	PABPN1L	100	65.428	ENSMNEG00000044808	PABPN1L	95	66.171	Macaca_nemestrina
ENSCAPG00000007240	PABPN1L	100	65.799	ENSMLEG00000032667	PABPN1L	95	66.543	Mandrillus_leucophaeus
ENSCAPG00000007240	PABPN1L	55	55.484	ENSMZEG00005002186	PABPN1L	70	48.936	Maylandia_zebra
ENSCAPG00000007240	PABPN1L	100	63.670	ENSMAUG00000014032	Pabpn1l	99	63.569	Mesocricetus_auratus
ENSCAPG00000007240	PABPN1L	99	69.776	ENSMICG00000028179	PABPN1L	95	69.403	Microcebus_murinus
ENSCAPG00000007240	PABPN1L	99	65.789	ENSMOCG00000007955	Pabpn1l	95	64.835	Microtus_ochrogaster
ENSCAPG00000007240	PABPN1L	100	49.077	ENSMODG00000003873	-	94	49.077	Monodelphis_domestica
ENSCAPG00000007240	PABPN1L	100	62.687	MGP_CAROLIEiJ_G0031670	Pabpn1l	95	62.313	Mus_caroli
ENSCAPG00000007240	PABPN1L	100	62.687	ENSMUSG00000069867	Pabpn1l	95	62.313	Mus_musculus
ENSCAPG00000007240	PABPN1L	100	61.624	MGP_PahariEiJ_G0023268	Pabpn1l	95	61.194	Mus_pahari
ENSCAPG00000007240	PABPN1L	100	62.313	MGP_SPRETEiJ_G0032788	Pabpn1l	95	61.940	Mus_spretus
ENSCAPG00000007240	PABPN1L	87	56.540	ENSMLUG00000003228	PABPN1L	78	54.237	Myotis_lucifugus
ENSCAPG00000007240	PABPN1L	100	67.790	ENSNGAG00000023992	Pabpn1l	95	67.790	Nannospalax_galili
ENSCAPG00000007240	PABPN1L	55	55.484	ENSNBRG00000017078	PABPN1L	64	56.291	Neolamprologus_brichardi
ENSCAPG00000007240	PABPN1L	100	66.418	ENSOPRG00000005597	PABPN1L	95	65.299	Ochotona_princeps
ENSCAPG00000007240	PABPN1L	99	78.810	ENSODEG00000004649	PABPN1L	95	76.952	Octodon_degus
ENSCAPG00000007240	PABPN1L	91	51.852	ENSOANG00000013901	PABPN1L	94	49.259	Ornithorhynchus_anatinus
ENSCAPG00000007240	PABPN1L	67	50.267	ENSORLG00000026560	PABPN1L	57	51.299	Oryzias_latipes
ENSCAPG00000007240	PABPN1L	67	50.267	ENSORLG00020015068	PABPN1L	57	51.299	Oryzias_latipes_hni
ENSCAPG00000007240	PABPN1L	67	50.267	ENSORLG00015000397	PABPN1L	57	51.299	Oryzias_latipes_hsok
ENSCAPG00000007240	PABPN1L	100	69.517	ENSOGAG00000000433	PABPN1L	95	69.517	Otolemur_garnettii
ENSCAPG00000007240	PABPN1L	97	63.345	ENSOARG00000013682	PABPN1L	95	63.793	Ovis_aries
ENSCAPG00000007240	PABPN1L	100	65.934	ENSPPAG00000028866	PABPN1L	95	65.809	Pan_paniscus
ENSCAPG00000007240	PABPN1L	97	65.530	ENSPPRG00000015106	PABPN1L	95	64.469	Panthera_pardus
ENSCAPG00000007240	PABPN1L	98	59.848	ENSPTIG00000015606	PABPN1L	99	59.848	Panthera_tigris_altaica
ENSCAPG00000007240	PABPN1L	100	65.934	ENSPTRG00000031120	PABPN1L	95	65.809	Pan_troglodytes
ENSCAPG00000007240	PABPN1L	100	65.799	ENSPANG00000026039	PABPN1L	95	66.543	Papio_anubis
ENSCAPG00000007240	PABPN1L	60	56.707	ENSPSIG00000003404	PABPN1L	92	53.804	Pelodiscus_sinensis
ENSCAPG00000007240	PABPN1L	100	65.169	ENSPEMG00000016624	Pabpn1l	95	65.169	Peromyscus_maniculatus_bairdii
ENSCAPG00000007240	PABPN1L	100	65.809	ENSPPYG00000007655	PABPN1L	95	65.809	Pongo_abelii
ENSCAPG00000007240	PABPN1L	100	67.286	ENSPCOG00000024077	PABPN1L	95	66.543	Propithecus_coquereli
ENSCAPG00000007240	PABPN1L	100	63.768	ENSPVAG00000002716	PABPN1L	95	63.406	Pteropus_vampyrus
ENSCAPG00000007240	PABPN1L	55	55.484	ENSPNYG00000004803	PABPN1L	70	48.936	Pundamilia_nyererei
ENSCAPG00000007240	PABPN1L	100	67.416	ENSRNOG00000029558	Pabpn1l	95	67.041	Rattus_norvegicus
ENSCAPG00000007240	PABPN1L	100	66.914	ENSRBIG00000030740	PABPN1L	95	67.658	Rhinopithecus_bieti
ENSCAPG00000007240	PABPN1L	100	66.296	ENSRROG00000032240	-	95	67.286	Rhinopithecus_roxellana
ENSCAPG00000007240	PABPN1L	100	65.428	ENSRROG00000035483	-	95	65.799	Rhinopithecus_roxellana
ENSCAPG00000007240	PABPN1L	100	63.704	ENSSBOG00000018410	PABPN1L	95	62.222	Saimiri_boliviensis_boliviensis
ENSCAPG00000007240	PABPN1L	98	49.451	ENSSHAG00000010001	-	92	48.718	Sarcophilus_harrisii
ENSCAPG00000007240	PABPN1L	93	48.988	ENSSARG00000005178	-	95	47.773	Sorex_araneus
ENSCAPG00000007240	PABPN1L	67	57.865	ENSSPUG00000007031	PABPN1L	77	57.222	Sphenodon_punctatus
ENSCAPG00000007240	PABPN1L	53	55.263	ENSSPAG00000017978	PABPN1L	70	47.619	Stegastes_partitus
ENSCAPG00000007240	PABPN1L	96	63.813	ENSSSCG00000036367	PABPN1L	95	62.825	Sus_scrofa
ENSCAPG00000007240	PABPN1L	67	45.856	ENSTRUG00000024725	PABPN1L	82	45.673	Takifugu_rubripes
ENSCAPG00000007240	PABPN1L	97	62.357	ENSTTRG00000004691	PABPN1L	95	62.271	Tursiops_truncatus
ENSCAPG00000007240	PABPN1L	55	53.503	ENSXETG00000011258	pabpn1l	73	53.125	Xenopus_tropicalis