EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000007242 (Gene tree)
Gene ID
-
Gene Symbol
SNRPF
Alias
Sm-F
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Minus strand
Length
3798 bases
Position
chrAVPZ01001000.1:5897419-5901216
Accession
11162
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000004768LSMPF01423.221.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000008346SNRPF-201258-ENSCAPP0000000476885 (aa)-UPI0000D8B02F
Gene Model
Click here to download ENSCAPG00000007242's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007242's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000007242SNRPF6844.828ENSCAPG00000011179-8944.828
ENSCAPG00000007242SNRPF7851.515ENSCAPG00000008104LSM68351.515
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000007242SNRPF100100.000ENSG00000139343SNRPF99100.000Homo_sapiens
ENSCAPG00000007242SNRPF10097.647ENSAPOG00000003377snrpf6697.647Acanthochromis_polyacanthus
ENSCAPG00000007242SNRPF100100.000ENSAMEG00000002166-100100.000Ailuropoda_melanoleuca
ENSCAPG00000007242SNRPF8886.667ENSAMEG00000018718-8687.838Ailuropoda_melanoleuca
ENSCAPG00000007242SNRPF9997.619ENSACIG00000013216snrpf9997.619Amphilophus_citrinellus
ENSCAPG00000007242SNRPF9997.619ENSAOCG00000015108snrpf9997.619Amphiprion_ocellaris
ENSCAPG00000007242SNRPF9997.619ENSAPEG00000022022snrpf9997.619Amphiprion_percula
ENSCAPG00000007242SNRPF9997.619ENSATEG00000022625snrpf9097.619Anabas_testudineus
ENSCAPG00000007242SNRPF10098.824ENSACAG00000014073SNRPF9898.824Anolis_carolinensis
ENSCAPG00000007242SNRPF8491.549ENSANAG00000020297-6591.549Aotus_nancymaae
ENSCAPG00000007242SNRPF100100.000ENSANAG00000032845SNRPF99100.000Aotus_nancymaae
ENSCAPG00000007242SNRPF8768.919ENSANAG00000025860-8368.919Aotus_nancymaae
ENSCAPG00000007242SNRPF9997.619ENSACLG00000016066snrpf9997.619Astatotilapia_calliptera
ENSCAPG00000007242SNRPF8794.595ENSAMXG00000007421snrpf8694.595Astyanax_mexicanus
ENSCAPG00000007242SNRPF100100.000ENSBTAG00000016271SNRPF99100.000Bos_taurus
ENSCAPG00000007242SNRPF9193.506ENSBTAG00000050012-9193.243Bos_taurus
ENSCAPG00000007242SNRPF9172.727WBGene00004918snr-58575.000Caenorhabditis_elegans
ENSCAPG00000007242SNRPF100100.000ENSCJAG00000002705-99100.000Callithrix_jacchus
ENSCAPG00000007242SNRPF100100.000ENSCAFG00000006395-77100.000Canis_familiaris
ENSCAPG00000007242SNRPF8494.366ENSCAFG00000031151-8594.521Canis_familiaris
ENSCAPG00000007242SNRPF9288.462ENSCAFG00020013161-7497.143Canis_lupus_dingo
ENSCAPG00000007242SNRPF8494.366ENSCAFG00020010823-8594.521Canis_lupus_dingo
ENSCAPG00000007242SNRPF10094.186ENSTSYG00000036502-9994.186Carlito_syrichta
ENSCAPG00000007242SNRPF9593.827ENSTSYG00000031636-6195.890Carlito_syrichta
ENSCAPG00000007242SNRPF8786.486ENSTSYG00000030635-8686.486Carlito_syrichta
ENSCAPG00000007242SNRPF100100.000ENSCPOG00000013898SNRPF99100.000Cavia_porcellus
ENSCAPG00000007242SNRPF100100.000ENSCCAG00000037378-99100.000Cebus_capucinus
ENSCAPG00000007242SNRPF10098.824ENSCCAG00000017356-9998.824Cebus_capucinus
ENSCAPG00000007242SNRPF9990.476ENSCCAG00000033627-5791.781Cebus_capucinus
ENSCAPG00000007242SNRPF100100.000ENSCLAG00000007200SNRPF99100.000Chinchilla_lanigera
ENSCAPG00000007242SNRPF100100.000ENSCSAG00000003602-69100.000Chlorocebus_sabaeus
ENSCAPG00000007242SNRPF74100.000ENSCHOG00000009392SNRPF98100.000Choloepus_hoffmanni
ENSCAPG00000007242SNRPF10089.412ENSCPBG00000026463-8690.541Chrysemys_picta_bellii
ENSCAPG00000007242SNRPF10088.235ENSCPBG00000001985-8890.541Chrysemys_picta_bellii
ENSCAPG00000007242SNRPF10094.118ENSCPBG00000024287-6794.118Chrysemys_picta_bellii
ENSCAPG00000007242SNRPF8791.892ENSCPBG00000006227-8691.892Chrysemys_picta_bellii
ENSCAPG00000007242SNRPF10087.059ENSCSAVG00000007498-8489.189Ciona_savignyi
ENSCAPG00000007242SNRPF8693.151ENSCGRG00001008965-5793.151Cricetulus_griseus_chok1gshd
ENSCAPG00000007242SNRPF100100.000ENSCGRG00001017100-99100.000Cricetulus_griseus_chok1gshd
ENSCAPG00000007242SNRPF100100.000ENSCGRG00000000336-99100.000Cricetulus_griseus_crigri
ENSCAPG00000007242SNRPF9293.590ENSCGRG00000018878-9193.151Cricetulus_griseus_crigri
ENSCAPG00000007242SNRPF8795.946ENSCSEG00000004748snrpf8695.946Cynoglossus_semilaevis
ENSCAPG00000007242SNRPF10097.647ENSCVAG00000000397snrpf6797.647Cyprinodon_variegatus
ENSCAPG00000007242SNRPF10095.402ENSDARG00000105037snrpf9995.402Danio_rerio
ENSCAPG00000007242SNRPF100100.000ENSDNOG00000043775-54100.000Dasypus_novemcinctus
ENSCAPG00000007242SNRPF8783.784ENSDNOG00000049373-6483.784Dasypus_novemcinctus
ENSCAPG00000007242SNRPF10098.824ENSDNOG00000048989-7698.824Dasypus_novemcinctus
ENSCAPG00000007242SNRPF8488.732ENSDORG00000025351-9988.732Dipodomys_ordii
ENSCAPG00000007242SNRPF8298.571ENSDORG00000029740-8598.571Dipodomys_ordii
ENSCAPG00000007242SNRPF9978.571FBgn0000426SmF8382.192Drosophila_melanogaster
ENSCAPG00000007242SNRPF100100.000ENSETEG00000001558-99100.000Echinops_telfairi
ENSCAPG00000007242SNRPF9675.610ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSCAPG00000007242SNRPF100100.000ENSECAG00000019817SNRPF69100.000Equus_caballus
ENSCAPG00000007242SNRPF100100.000ENSEEUG00000013509SNRPF100100.000Erinaceus_europaeus
ENSCAPG00000007242SNRPF8794.595ENSELUG00000003121RUXF8694.595Esox_lucius
ENSCAPG00000007242SNRPF10091.765ENSELUG00000007737RUXF8593.243Esox_lucius
ENSCAPG00000007242SNRPF8775.676ENSFCAG00000021942-8575.676Felis_catus
ENSCAPG00000007242SNRPF100100.000ENSFCAG00000029966-99100.000Felis_catus
ENSCAPG00000007242SNRPF9878.313ENSFCAG00000031148-7176.623Felis_catus
ENSCAPG00000007242SNRPF100100.000ENSFALG00000010799SNRPF99100.000Ficedula_albicollis
ENSCAPG00000007242SNRPF100100.000ENSFDAG00000002831-99100.000Fukomys_damarensis
ENSCAPG00000007242SNRPF10097.647ENSFHEG00000003240snrpf7597.647Fundulus_heteroclitus
ENSCAPG00000007242SNRPF10097.647ENSGMOG00000007741snrpf10097.647Gadus_morhua
ENSCAPG00000007242SNRPF100100.000ENSGALG00000011409SNRPF99100.000Gallus_gallus
ENSCAPG00000007242SNRPF9997.619ENSGAFG00000016187snrpf9797.619Gambusia_affinis
ENSCAPG00000007242SNRPF10096.471ENSGACG00000020055snrpf10096.471Gasterosteus_aculeatus
ENSCAPG00000007242SNRPF9391.139ENSGAGG00000022991-8094.118Gopherus_agassizii
ENSCAPG00000007242SNRPF8793.243ENSGAGG00000012945-6894.595Gopherus_agassizii
ENSCAPG00000007242SNRPF7191.667ENSGAGG00000011163-10091.667Gopherus_agassizii
ENSCAPG00000007242SNRPF7296.721ENSGAGG00000020974-5196.721Gopherus_agassizii
ENSCAPG00000007242SNRPF8086.765ENSGAGG00000014132-8286.765Gopherus_agassizii
ENSCAPG00000007242SNRPF100100.000ENSGGOG00000001127-99100.000Gorilla_gorilla
ENSCAPG00000007242SNRPF9880.723ENSGGOG00000039936-8278.378Gorilla_gorilla
ENSCAPG00000007242SNRPF9275.641ENSGGOG00000039564-8974.324Gorilla_gorilla
ENSCAPG00000007242SNRPF10098.824ENSHGLG00000021172-9998.824Heterocephalus_glaber_female
ENSCAPG00000007242SNRPF100100.000ENSHGLG00000009108SNRPF99100.000Heterocephalus_glaber_female
ENSCAPG00000007242SNRPF100100.000ENSHGLG00100008103-100100.000Heterocephalus_glaber_male
ENSCAPG00000007242SNRPF10098.824ENSHGLG00100019596-9998.824Heterocephalus_glaber_male
ENSCAPG00000007242SNRPF7485.714ENSHCOG00000018663snrpf5585.714Hippocampus_comes
ENSCAPG00000007242SNRPF10097.647ENSIPUG00000018994snrpf9997.647Ictalurus_punctatus
ENSCAPG00000007242SNRPF100100.000ENSSTOG00000010434-99100.000Ictidomys_tridecemlineatus
ENSCAPG00000007242SNRPF10084.706ENSJJAG00000010502-8886.486Jaculus_jaculus
ENSCAPG00000007242SNRPF10081.176ENSJJAG00000004558-8882.432Jaculus_jaculus
ENSCAPG00000007242SNRPF7994.030ENSJJAG00000004828-10094.030Jaculus_jaculus
ENSCAPG00000007242SNRPF100100.000ENSJJAG00000011272-99100.000Jaculus_jaculus
ENSCAPG00000007242SNRPF9997.619ENSKMAG00000013566snrpf9897.619Kryptolebias_marmoratus
ENSCAPG00000007242SNRPF10096.471ENSLBEG00000008800snrpf9996.471Labrus_bergylta
ENSCAPG00000007242SNRPF100100.000ENSLACG00000002456-73100.000Latimeria_chalumnae
ENSCAPG00000007242SNRPF8794.595ENSLOCG00000015744snrpf8694.595Lepisosteus_oculatus
ENSCAPG00000007242SNRPF100100.000ENSLAFG00000017426SNRPF99100.000Loxodonta_africana
ENSCAPG00000007242SNRPF9996.429ENSMAMG00000016593snrpf9996.429Mastacembelus_armatus
ENSCAPG00000007242SNRPF9997.619ENSMZEG00005014701snrpf9997.619Maylandia_zebra
ENSCAPG00000007242SNRPF99100.000ENSMGAG00000011453-76100.000Meleagris_gallopavo
ENSCAPG00000007242SNRPF8794.595ENSMAUG00000008799-8694.595Mesocricetus_auratus
ENSCAPG00000007242SNRPF87100.000ENSMAUG00000016909-100100.000Mesocricetus_auratus
ENSCAPG00000007242SNRPF7293.443ENSMAUG00000010289-7693.443Mesocricetus_auratus
ENSCAPG00000007242SNRPF87100.000ENSMAUG00000019737-100100.000Mesocricetus_auratus
ENSCAPG00000007242SNRPF8793.243ENSMICG00000030494-5993.243Microcebus_murinus
ENSCAPG00000007242SNRPF100100.000ENSMICG00000012153-99100.000Microcebus_murinus
ENSCAPG00000007242SNRPF8785.135ENSMOCG00000022166-8185.135Microtus_ochrogaster
ENSCAPG00000007242SNRPF100100.000ENSMOCG00000020437Snrpf99100.000Microtus_ochrogaster
ENSCAPG00000007242SNRPF8083.824ENSMOCG00000020220-8783.824Microtus_ochrogaster
ENSCAPG00000007242SNRPF10096.471ENSMMOG00000007127snrpf10096.471Mola_mola
ENSCAPG00000007242SNRPF100100.000ENSMODG00000008091SNRPF75100.000Monodelphis_domestica
ENSCAPG00000007242SNRPF9997.619ENSMALG00000012328snrpf9997.619Monopterus_albus
ENSCAPG00000007242SNRPF100100.000MGP_CAROLIEiJ_G0015735-99100.000Mus_caroli
ENSCAPG00000007242SNRPF100100.000ENSMUSG00000020018Snrpf99100.000Mus_musculus
ENSCAPG00000007242SNRPF100100.000MGP_PahariEiJ_G0031350Snrpf99100.000Mus_pahari
ENSCAPG00000007242SNRPF100100.000MGP_SPRETEiJ_G0016553Snrpf99100.000Mus_spretus
ENSCAPG00000007242SNRPF100100.000ENSMPUG00000007176-76100.000Mustela_putorius_furo
ENSCAPG00000007242SNRPF100100.000ENSMLUG00000029201-80100.000Myotis_lucifugus
ENSCAPG00000007242SNRPF100100.000ENSMLUG00000027932-80100.000Myotis_lucifugus
ENSCAPG00000007242SNRPF100100.000ENSMLUG00000013577-100100.000Myotis_lucifugus
ENSCAPG00000007242SNRPF100100.000ENSMLUG00000026149-80100.000Myotis_lucifugus
ENSCAPG00000007242SNRPF10081.176ENSMLUG00000026269-7079.730Myotis_lucifugus
ENSCAPG00000007242SNRPF7490.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSCAPG00000007242SNRPF100100.000ENSNGAG00000024292-99100.000Nannospalax_galili
ENSCAPG00000007242SNRPF10097.647ENSNBRG00000011682snrpf8797.647Neolamprologus_brichardi
ENSCAPG00000007242SNRPF8770.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSCAPG00000007242SNRPF100100.000ENSODEG00000010328-99100.000Octodon_degus
ENSCAPG00000007242SNRPF100100.000ENSOCUG00000010925SNRPF75100.000Oryctolagus_cuniculus
ENSCAPG00000007242SNRPF8794.595ENSORLG00020008216snrpf8794.595Oryzias_latipes_hni
ENSCAPG00000007242SNRPF8794.595ENSORLG00015007418snrpf8794.595Oryzias_latipes_hsok
ENSCAPG00000007242SNRPF9996.429ENSOMEG00000003018snrpf9996.429Oryzias_melastigma
ENSCAPG00000007242SNRPF10097.647ENSOGAG00000030323-9997.647Otolemur_garnettii
ENSCAPG00000007242SNRPF100100.000ENSOARG00000011853-74100.000Ovis_aries
ENSCAPG00000007242SNRPF9275.641ENSPPAG00000037479-8974.324Pan_paniscus
ENSCAPG00000007242SNRPF9880.723ENSPPAG00000037544-8278.378Pan_paniscus
ENSCAPG00000007242SNRPF9877.108ENSPPRG00000007449-7677.027Panthera_pardus
ENSCAPG00000007242SNRPF100100.000ENSPPRG00000005875-99100.000Panthera_pardus
ENSCAPG00000007242SNRPF100100.000ENSPTIG00000007520SNRPF99100.000Panthera_tigris_altaica
ENSCAPG00000007242SNRPF9879.518ENSPTIG00000005117-8877.027Panthera_tigris_altaica
ENSCAPG00000007242SNRPF9880.723ENSPTRG00000043814-8278.378Pan_troglodytes
ENSCAPG00000007242SNRPF9275.641ENSPTRG00000047717-8974.324Pan_troglodytes
ENSCAPG00000007242SNRPF10097.647ENSPKIG00000014784snrpf9397.647Paramormyrops_kingsleyae
ENSCAPG00000007242SNRPF100100.000ENSPSIG00000016462SNRPF99100.000Pelodiscus_sinensis
ENSCAPG00000007242SNRPF10096.471ENSPMGG00000023548snrpf10096.471Periophthalmus_magnuspinnatus
ENSCAPG00000007242SNRPF100100.000ENSPEMG00000023326Snrpf99100.000Peromyscus_maniculatus_bairdii
ENSCAPG00000007242SNRPF9997.619ENSPLAG00000023932snrpf9997.619Poecilia_latipinna
ENSCAPG00000007242SNRPF9997.619ENSPMEG00000003377snrpf9997.619Poecilia_mexicana
ENSCAPG00000007242SNRPF9997.619ENSPREG00000022635snrpf9797.619Poecilia_reticulata
ENSCAPG00000007242SNRPF100100.000ENSPPYG00000004847-99100.000Pongo_abelii
ENSCAPG00000007242SNRPF100100.000ENSPCOG00000023833-99100.000Propithecus_coquereli
ENSCAPG00000007242SNRPF100100.000ENSPVAG00000009036SNRPF99100.000Pteropus_vampyrus
ENSCAPG00000007242SNRPF9997.619ENSPNYG00000021712snrpf9997.619Pundamilia_nyererei
ENSCAPG00000007242SNRPF9996.429ENSPNAG00000019117snrpf9996.429Pygocentrus_nattereri
ENSCAPG00000007242SNRPF100100.000ENSRNOG00000005556Snrpf99100.000Rattus_norvegicus
ENSCAPG00000007242SNRPF10096.471ENSRBIG00000030414-9996.471Rhinopithecus_bieti
ENSCAPG00000007242SNRPF10096.471ENSRROG00000021975-9996.471Rhinopithecus_roxellana
ENSCAPG00000007242SNRPF8259.155YPR182WSMX38359.155Saccharomyces_cerevisiae
ENSCAPG00000007242SNRPF10098.824ENSSBOG00000012868-9998.824Saimiri_boliviensis_boliviensis
ENSCAPG00000007242SNRPF100100.000ENSSBOG00000036179-99100.000Saimiri_boliviensis_boliviensis
ENSCAPG00000007242SNRPF8785.135ENSSBOG00000032297-8585.135Saimiri_boliviensis_boliviensis
ENSCAPG00000007242SNRPF9180.000ENSSBOG00000027638-9080.000Saimiri_boliviensis_boliviensis
ENSCAPG00000007242SNRPF100100.000ENSSHAG00000012294SNRPF77100.000Sarcophilus_harrisii
ENSCAPG00000007242SNRPF7596.875ENSSFOG00015021523snrpf9696.875Scleropages_formosus
ENSCAPG00000007242SNRPF10096.471ENSSMAG00000005533snrpf9896.471Scophthalmus_maximus
ENSCAPG00000007242SNRPF7596.875ENSSDUG00000016283snrpf7696.875Seriola_dumerili
ENSCAPG00000007242SNRPF9997.619ENSSLDG00000005119snrpf9897.619Seriola_lalandi_dorsalis
ENSCAPG00000007242SNRPF9473.750ENSSLDG00000003885-9077.027Seriola_lalandi_dorsalis
ENSCAPG00000007242SNRPF99100.000ENSSPUG00000014590-99100.000Sphenodon_punctatus
ENSCAPG00000007242SNRPF10097.647ENSSPAG00000003283snrpf9797.647Stegastes_partitus
ENSCAPG00000007242SNRPF100100.000ENSSSCG00000000895SNRPF99100.000Sus_scrofa
ENSCAPG00000007242SNRPF6894.828ENSTRUG00000014956snrpf8494.828Takifugu_rubripes
ENSCAPG00000007242SNRPF10096.471ENSTNIG00000012672snrpf9996.471Tetraodon_nigroviridis
ENSCAPG00000007242SNRPF8770.270ENSTTRG00000006070SNRPF8670.270Tursiops_truncatus
ENSCAPG00000007242SNRPF100100.000ENSUAMG00000008176-99100.000Ursus_americanus
ENSCAPG00000007242SNRPF10087.059ENSUAMG00000001101-8789.189Ursus_americanus
ENSCAPG00000007242SNRPF8789.189ENSUMAG00000006177-8789.189Ursus_maritimus
ENSCAPG00000007242SNRPF100100.000ENSUMAG00000003528-99100.000Ursus_maritimus
ENSCAPG00000007242SNRPF100100.000ENSVPAG00000008712-99100.000Vicugna_pacos
ENSCAPG00000007242SNRPF9192.208ENSVVUG00000023821-9591.892Vulpes_vulpes
ENSCAPG00000007242SNRPF8775.000ENSXETG00000021630snrpf8775.000Xenopus_tropicalis
ENSCAPG00000007242SNRPF9997.619ENSXCOG00000013860snrpf9797.619Xiphophorus_couchianus
ENSCAPG00000007242SNRPF9997.619ENSXMAG00000015448snrpf9997.619Xiphophorus_maculatus

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