EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000007251 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 26671 bases
Position: chrAVPZ01000001.1:17812046-17838716
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004787	POP1	PF06978.11	2.2e-36	1	2
ENSCAPP00000004787	POP1	PF06978.11	2.2e-36	2	2
ENSCAPP00000004787	POPLD	PF08170.12	9.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000008365	POP1-201	3012	-	ENSCAPP00000004787	1003 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000007251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000007251	POP1	100	78.426	ENSG00000104356	POP1	100	88.525	Homo_sapiens
ENSCAPG00000007251	POP1	100	46.125	ENSAPOG00000008198	pop1	100	46.125	Acanthochromis_polyacanthus
ENSCAPG00000007251	POP1	99	75.097	ENSAMEG00000000556	POP1	99	75.097	Ailuropoda_melanoleuca
ENSCAPG00000007251	POP1	90	47.739	ENSACIG00000004169	POP1	100	45.351	Amphilophus_citrinellus
ENSCAPG00000007251	POP1	100	45.644	ENSAOCG00000010991	pop1	100	45.644	Amphiprion_ocellaris
ENSCAPG00000007251	POP1	93	44.489	ENSAPEG00000007607	pop1	98	44.985	Amphiprion_percula
ENSCAPG00000007251	POP1	100	45.258	ENSATEG00000024814	POP1	100	45.216	Anabas_testudineus
ENSCAPG00000007251	POP1	92	59.830	ENSAPLG00000014418	POP1	99	59.936	Anas_platyrhynchos
ENSCAPG00000007251	POP1	99	54.341	ENSACAG00000016083	POP1	100	54.651	Anolis_carolinensis
ENSCAPG00000007251	POP1	88	81.602	ENSANAG00000026360	POP1	99	81.602	Aotus_nancymaae
ENSCAPG00000007251	POP1	100	46.147	ENSACLG00000010951	pop1	100	46.516	Astatotilapia_calliptera
ENSCAPG00000007251	POP1	99	45.000	ENSAMXG00000014483	POP1	99	45.000	Astyanax_mexicanus
ENSCAPG00000007251	POP1	100	73.761	ENSBTAG00000012596	POP1	100	73.761	Bos_taurus
ENSCAPG00000007251	POP1	100	76.288	ENSCJAG00000015567	POP1	100	76.288	Callithrix_jacchus
ENSCAPG00000007251	POP1	100	74.853	ENSCAFG00000000469	POP1	100	74.658	Canis_familiaris
ENSCAPG00000007251	POP1	100	74.976	ENSCAFG00020026765	POP1	100	74.976	Canis_lupus_dingo
ENSCAPG00000007251	POP1	100	74.052	ENSCHIG00000017066	POP1	100	74.247	Capra_hircus
ENSCAPG00000007251	POP1	100	77.101	ENSTSYG00000003097	POP1	100	77.101	Carlito_syrichta
ENSCAPG00000007251	POP1	100	95.870	ENSCPOG00000002901	POP1	100	95.870	Cavia_porcellus
ENSCAPG00000007251	POP1	100	75.996	ENSCCAG00000018939	POP1	100	76.190	Cebus_capucinus
ENSCAPG00000007251	POP1	100	77.454	ENSCATG00000040916	POP1	100	77.454	Cercocebus_atys
ENSCAPG00000007251	POP1	100	85.421	ENSCLAG00000007208	POP1	97	85.421	Chinchilla_lanigera
ENSCAPG00000007251	POP1	90	77.238	ENSCSAG00000012340	POP1	99	77.238	Chlorocebus_sabaeus
ENSCAPG00000007251	POP1	90	79.070	ENSCHOG00000011432	POP1	96	79.070	Choloepus_hoffmanni
ENSCAPG00000007251	POP1	100	61.793	ENSCPBG00000006373	POP1	100	62.257	Chrysemys_picta_bellii
ENSCAPG00000007251	POP1	82	37.795	ENSCING00000008323	-	90	36.861	Ciona_intestinalis
ENSCAPG00000007251	POP1	100	77.551	ENSCANG00000001647	POP1	100	77.551	Colobus_angolensis_palliatus
ENSCAPG00000007251	POP1	100	73.515	ENSCGRG00001017308	Pop1	100	73.444	Cricetulus_griseus_chok1gshd
ENSCAPG00000007251	POP1	100	68.062	ENSCGRG00000010824	Pop1	100	67.996	Cricetulus_griseus_crigri
ENSCAPG00000007251	POP1	100	44.213	ENSCSEG00000008737	POP1	100	44.350	Cynoglossus_semilaevis
ENSCAPG00000007251	POP1	100	45.793	ENSCVAG00000022248	pop1	100	45.698	Cyprinodon_variegatus
ENSCAPG00000007251	POP1	100	71.711	ENSDNOG00000019974	POP1	100	71.711	Dasypus_novemcinctus
ENSCAPG00000007251	POP1	100	68.482	ENSDORG00000015384	Pop1	100	68.293	Dipodomys_ordii
ENSCAPG00000007251	POP1	61	33.333	FBgn0026702	l(1)G0045	70	33.230	Drosophila_melanogaster
ENSCAPG00000007251	POP1	88	64.000	ENSETEG00000007839	POP1	88	64.000	Echinops_telfairi
ENSCAPG00000007251	POP1	100	75.899	ENSEASG00005003189	POP1	98	75.899	Equus_asinus_asinus
ENSCAPG00000007251	POP1	100	75.899	ENSECAG00000024236	POP1	100	75.899	Equus_caballus
ENSCAPG00000007251	POP1	67	66.520	ENSEEUG00000003050	-	70	66.520	Erinaceus_europaeus
ENSCAPG00000007251	POP1	99	45.717	ENSELUG00000003526	pop1	99	45.717	Esox_lucius
ENSCAPG00000007251	POP1	100	76.579	ENSFCAG00000002168	POP1	100	76.579	Felis_catus
ENSCAPG00000007251	POP1	100	57.101	ENSFALG00000005711	POP1	100	56.853	Ficedula_albicollis
ENSCAPG00000007251	POP1	100	82.296	ENSFDAG00000017068	POP1	100	82.296	Fukomys_damarensis
ENSCAPG00000007251	POP1	100	45.351	ENSFHEG00000019518	pop1	100	45.195	Fundulus_heteroclitus
ENSCAPG00000007251	POP1	95	44.246	ENSGMOG00000000659	POP1	99	44.191	Gadus_morhua
ENSCAPG00000007251	POP1	100	46.453	ENSGAFG00000019770	POP1	100	46.453	Gambusia_affinis
ENSCAPG00000007251	POP1	100	45.611	ENSGACG00000003499	pop1	100	45.611	Gasterosteus_aculeatus
ENSCAPG00000007251	POP1	100	61.138	ENSGAGG00000011737	POP1	98	61.531	Gopherus_agassizii
ENSCAPG00000007251	POP1	100	78.037	ENSGGOG00000003176	POP1	100	78.037	Gorilla_gorilla
ENSCAPG00000007251	POP1	100	46.692	ENSHBUG00000021583	pop1	100	46.792	Haplochromis_burtoni
ENSCAPG00000007251	POP1	100	82.216	ENSHGLG00000006029	POP1	100	82.216	Heterocephalus_glaber_female
ENSCAPG00000007251	POP1	100	82.216	ENSHGLG00100016879	POP1	100	82.216	Heterocephalus_glaber_male
ENSCAPG00000007251	POP1	90	47.053	ENSHCOG00000013888	pop1	96	46.391	Hippocampus_comes
ENSCAPG00000007251	POP1	99	45.264	ENSIPUG00000018336	pop1	99	45.264	Ictalurus_punctatus
ENSCAPG00000007251	POP1	100	77.637	ENSSTOG00000011455	POP1	97	77.637	Ictidomys_tridecemlineatus
ENSCAPG00000007251	POP1	100	72.016	ENSJJAG00000013325	Pop1	100	71.053	Jaculus_jaculus
ENSCAPG00000007251	POP1	100	46.110	ENSKMAG00000001346	POP1	100	46.110	Kryptolebias_marmoratus
ENSCAPG00000007251	POP1	89	46.760	ENSLBEG00000024457	POP1	95	46.822	Labrus_bergylta
ENSCAPG00000007251	POP1	93	54.343	ENSLACG00000012498	POP1	99	54.444	Latimeria_chalumnae
ENSCAPG00000007251	POP1	100	49.372	ENSLOCG00000009817	POP1	100	49.471	Lepisosteus_oculatus
ENSCAPG00000007251	POP1	100	75.170	ENSLAFG00000010770	POP1	100	75.170	Loxodonta_africana
ENSCAPG00000007251	POP1	100	77.551	ENSMFAG00000000347	POP1	100	77.551	Macaca_fascicularis
ENSCAPG00000007251	POP1	100	77.259	ENSMNEG00000036870	POP1	100	77.259	Macaca_nemestrina
ENSCAPG00000007251	POP1	100	77.357	ENSMLEG00000034986	POP1	100	77.357	Mandrillus_leucophaeus
ENSCAPG00000007251	POP1	100	45.118	ENSMAMG00000004040	pop1	100	45.498	Mastacembelus_armatus
ENSCAPG00000007251	POP1	100	46.604	ENSMZEG00005025448	pop1	100	46.704	Maylandia_zebra
ENSCAPG00000007251	POP1	100	55.090	ENSMGAG00000012167	POP1	100	55.000	Meleagris_gallopavo
ENSCAPG00000007251	POP1	100	73.463	ENSMAUG00000017537	Pop1	100	73.438	Mesocricetus_auratus
ENSCAPG00000007251	POP1	100	77.724	ENSMICG00000004361	POP1	100	77.724	Microcebus_murinus
ENSCAPG00000007251	POP1	100	72.656	ENSMOCG00000006356	Pop1	100	72.754	Microtus_ochrogaster
ENSCAPG00000007251	POP1	100	43.301	ENSMMOG00000018242	pop1	100	43.204	Mola_mola
ENSCAPG00000007251	POP1	100	63.698	ENSMODG00000006561	POP1	100	63.311	Monodelphis_domestica
ENSCAPG00000007251	POP1	100	46.360	ENSMALG00000012621	POP1	100	46.367	Monopterus_albus
ENSCAPG00000007251	POP1	100	71.762	MGP_CAROLIEiJ_G0019726	Pop1	100	72.125	Mus_caroli
ENSCAPG00000007251	POP1	100	71.957	ENSMUSG00000022325	Pop1	100	72.320	Mus_musculus
ENSCAPG00000007251	POP1	100	72.710	MGP_PahariEiJ_G0019735	Pop1	100	72.417	Mus_pahari
ENSCAPG00000007251	POP1	100	71.762	MGP_SPRETEiJ_G0020622	Pop1	100	72.125	Mus_spretus
ENSCAPG00000007251	POP1	100	75.752	ENSMPUG00000015250	POP1	100	75.752	Mustela_putorius_furo
ENSCAPG00000007251	POP1	100	71.969	ENSMLUG00000010204	POP1	100	71.969	Myotis_lucifugus
ENSCAPG00000007251	POP1	100	76.362	ENSNGAG00000001582	Pop1	100	76.362	Nannospalax_galili
ENSCAPG00000007251	POP1	89	46.945	ENSNBRG00000002356	pop1	94	47.034	Neolamprologus_brichardi
ENSCAPG00000007251	POP1	100	77.551	ENSNLEG00000002541	POP1	100	77.551	Nomascus_leucogenys
ENSCAPG00000007251	POP1	86	69.277	ENSMEUG00000003118	POP1	90	69.277	Notamacropus_eugenii
ENSCAPG00000007251	POP1	100	73.627	ENSOPRG00000007667	POP1	100	73.627	Ochotona_princeps
ENSCAPG00000007251	POP1	100	81.800	ENSODEG00000003984	POP1	100	81.800	Octodon_degus
ENSCAPG00000007251	POP1	100	47.433	ENSONIG00000016445	pop1	100	47.254	Oreochromis_niloticus
ENSCAPG00000007251	POP1	59	70.122	ENSOANG00000001278	-	94	70.122	Ornithorhynchus_anatinus
ENSCAPG00000007251	POP1	100	75.048	ENSOCUG00000017400	POP1	100	75.048	Oryctolagus_cuniculus
ENSCAPG00000007251	POP1	100	46.473	ENSORLG00000002839	pop1	100	46.917	Oryzias_latipes
ENSCAPG00000007251	POP1	91	46.891	ENSORLG00020022450	POP1	98	47.219	Oryzias_latipes_hni
ENSCAPG00000007251	POP1	92	48.424	ENSORLG00015012746	POP1	100	46.570	Oryzias_latipes_hsok
ENSCAPG00000007251	POP1	100	46.049	ENSOMEG00000006915	pop1	99	46.146	Oryzias_melastigma
ENSCAPG00000007251	POP1	100	75.875	ENSOGAG00000001466	POP1	100	75.875	Otolemur_garnettii
ENSCAPG00000007251	POP1	100	78.328	ENSPPAG00000018410	POP1	100	78.328	Pan_paniscus
ENSCAPG00000007251	POP1	100	76.774	ENSPPRG00000005002	POP1	100	76.774	Panthera_pardus
ENSCAPG00000007251	POP1	100	76.968	ENSPTIG00000016527	POP1	100	76.968	Panthera_tigris_altaica
ENSCAPG00000007251	POP1	100	78.328	ENSPTRG00000020458	POP1	100	78.328	Pan_troglodytes
ENSCAPG00000007251	POP1	100	77.259	ENSPANG00000009704	POP1	100	77.259	Papio_anubis
ENSCAPG00000007251	POP1	99	49.135	ENSPKIG00000016325	POP1	99	49.135	Paramormyrops_kingsleyae
ENSCAPG00000007251	POP1	100	60.350	ENSPSIG00000012343	POP1	100	60.330	Pelodiscus_sinensis
ENSCAPG00000007251	POP1	90	46.417	ENSPMGG00000022253	POP1	95	46.908	Periophthalmus_magnuspinnatus
ENSCAPG00000007251	POP1	99	71.797	ENSPEMG00000023633	Pop1	100	71.797	Peromyscus_maniculatus_bairdii
ENSCAPG00000007251	POP1	90	43.579	ENSPMAG00000003209	POP1	100	44.000	Petromyzon_marinus
ENSCAPG00000007251	POP1	100	63.514	ENSPCIG00000012216	POP1	100	63.760	Phascolarctos_cinereus
ENSCAPG00000007251	POP1	100	46.287	ENSPFOG00000012490	POP1	100	46.287	Poecilia_formosa
ENSCAPG00000007251	POP1	100	46.236	ENSPLAG00000004646	POP1	100	46.236	Poecilia_latipinna
ENSCAPG00000007251	POP1	100	46.583	ENSPMEG00000019592	POP1	100	46.391	Poecilia_mexicana
ENSCAPG00000007251	POP1	100	46.102	ENSPREG00000020951	POP1	100	46.102	Poecilia_reticulata
ENSCAPG00000007251	POP1	100	78.231	ENSPPYG00000018777	POP1	100	78.231	Pongo_abelii
ENSCAPG00000007251	POP1	100	69.951	ENSPCAG00000016662	POP1	100	69.951	Procavia_capensis
ENSCAPG00000007251	POP1	100	78.502	ENSPCOG00000019420	POP1	100	78.502	Propithecus_coquereli
ENSCAPG00000007251	POP1	100	75.922	ENSPVAG00000014468	POP1	100	75.922	Pteropus_vampyrus
ENSCAPG00000007251	POP1	89	47.380	ENSPNYG00000004476	pop1	100	45.038	Pundamilia_nyererei
ENSCAPG00000007251	POP1	99	44.414	ENSPNAG00000000265	pop1	99	44.240	Pygocentrus_nattereri
ENSCAPG00000007251	POP1	100	73.515	ENSRNOG00000005243	Pop1	100	73.515	Rattus_norvegicus
ENSCAPG00000007251	POP1	100	77.357	ENSRBIG00000007996	POP1	100	77.357	Rhinopithecus_bieti
ENSCAPG00000007251	POP1	100	77.551	ENSRROG00000012334	POP1	100	77.551	Rhinopithecus_roxellana
ENSCAPG00000007251	POP1	99	77.362	ENSSBOG00000020830	POP1	100	77.362	Saimiri_boliviensis_boliviensis
ENSCAPG00000007251	POP1	100	64.189	ENSSHAG00000000296	POP1	100	63.900	Sarcophilus_harrisii
ENSCAPG00000007251	POP1	100	48.012	ENSSFOG00015007429	pop1	99	47.818	Scleropages_formosus
ENSCAPG00000007251	POP1	86	50.303	ENSSMAG00000010467	POP1	98	46.289	Scophthalmus_maximus
ENSCAPG00000007251	POP1	100	44.873	ENSSDUG00000007817	POP1	100	45.343	Seriola_dumerili
ENSCAPG00000007251	POP1	100	45.061	ENSSLDG00000012565	POP1	100	45.301	Seriola_lalandi_dorsalis
ENSCAPG00000007251	POP1	100	57.143	ENSSPUG00000003550	-	100	57.549	Sphenodon_punctatus
ENSCAPG00000007251	POP1	100	45.552	ENSSPAG00000014955	pop1	100	45.508	Stegastes_partitus
ENSCAPG00000007251	POP1	100	74.125	ENSSSCG00000006078	POP1	100	74.125	Sus_scrofa
ENSCAPG00000007251	POP1	92	53.564	ENSTGUG00000012011	-	100	54.202	Taeniopygia_guttata
ENSCAPG00000007251	POP1	89	47.091	ENSTRUG00000010856	pop1	92	46.875	Takifugu_rubripes
ENSCAPG00000007251	POP1	92	47.260	ENSTNIG00000013297	pop1	99	47.500	Tetraodon_nigroviridis
ENSCAPG00000007251	POP1	95	73.449	ENSTBEG00000014214	POP1	100	73.449	Tupaia_belangeri
ENSCAPG00000007251	POP1	100	72.886	ENSTTRG00000016071	POP1	100	72.886	Tursiops_truncatus
ENSCAPG00000007251	POP1	99	72.888	ENSUAMG00000017309	POP1	99	72.986	Ursus_americanus
ENSCAPG00000007251	POP1	94	85.496	ENSUMAG00000016952	POP1	99	85.496	Ursus_maritimus
ENSCAPG00000007251	POP1	82	87.891	ENSVPAG00000008278	POP1	80	87.891	Vicugna_pacos
ENSCAPG00000007251	POP1	100	75.073	ENSVVUG00000010994	POP1	100	75.073	Vulpes_vulpes
ENSCAPG00000007251	POP1	100	41.858	ENSXCOG00000017043	POP1	100	41.954	Xiphophorus_couchianus
ENSCAPG00000007251	POP1	100	45.385	ENSXMAG00000002472	POP1	100	45.192	Xiphophorus_maculatus