EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000007307 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 104490 bases
Position: chrAVPZ01000744.1:3146571-3251060
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000004896	Ago_hook	PF10427.9	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000008474	TNRC6C-201	5628	-	ENSCAPP00000004896	1875 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000007307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000007307	TNRC6C	99	84.136	ENSG00000078687	TNRC6C	100	87.368	Homo_sapiens
ENSCAPG00000007307	TNRC6C	94	49.128	ENSAPOG00000019749	tnrc6c1	98	46.989	Acanthochromis_polyacanthus
ENSCAPG00000007307	TNRC6C	93	79.539	ENSAMEG00000013756	TNRC6C	99	79.267	Ailuropoda_melanoleuca
ENSCAPG00000007307	TNRC6C	90	46.946	ENSACIG00000008075	tnrc6c1	74	50.000	Amphilophus_citrinellus
ENSCAPG00000007307	TNRC6C	84	62.880	ENSAOCG00000023968	tnrc6c1	99	45.895	Amphiprion_ocellaris
ENSCAPG00000007307	TNRC6C	88	50.602	ENSAPEG00000009020	tnrc6c1	99	46.313	Amphiprion_percula
ENSCAPG00000007307	TNRC6C	99	78.031	ENSAPLG00000005456	TNRC6C	99	77.692	Anas_platyrhynchos
ENSCAPG00000007307	TNRC6C	99	77.617	ENSACAG00000016198	TNRC6C	98	77.830	Anolis_carolinensis
ENSCAPG00000007307	TNRC6C	99	83.342	ENSANAG00000021554	TNRC6C	100	84.353	Aotus_nancymaae
ENSCAPG00000007307	TNRC6C	93	44.586	ENSACLG00000000424	tnrc6c1	93	49.926	Astatotilapia_calliptera
ENSCAPG00000007307	TNRC6C	99	79.969	ENSBTAG00000018658	TNRC6C	100	81.401	Bos_taurus
ENSCAPG00000007307	TNRC6C	99	83.447	ENSCJAG00000019431	TNRC6C	100	84.235	Callithrix_jacchus
ENSCAPG00000007307	TNRC6C	99	82.408	ENSCAFG00000005224	TNRC6C	98	82.070	Canis_familiaris
ENSCAPG00000007307	TNRC6C	99	84.236	ENSCAFG00020006661	TNRC6C	100	84.012	Canis_lupus_dingo
ENSCAPG00000007307	TNRC6C	99	81.390	ENSCHIG00000026004	TNRC6C	100	80.601	Capra_hircus
ENSCAPG00000007307	TNRC6C	89	83.891	ENSTSYG00000005403	TNRC6C	100	83.795	Carlito_syrichta
ENSCAPG00000007307	TNRC6C	100	93.694	ENSCPOG00000000467	TNRC6C	100	93.868	Cavia_porcellus
ENSCAPG00000007307	TNRC6C	99	84.023	ENSCCAG00000030524	TNRC6C	100	84.882	Cebus_capucinus
ENSCAPG00000007307	TNRC6C	99	83.866	ENSCATG00000033135	TNRC6C	100	84.824	Cercocebus_atys
ENSCAPG00000007307	TNRC6C	99	89.663	ENSCLAG00000011139	TNRC6C	98	89.460	Chinchilla_lanigera
ENSCAPG00000007307	TNRC6C	99	83.342	ENSCSAG00000005167	TNRC6C	98	83.211	Chlorocebus_sabaeus
ENSCAPG00000007307	TNRC6C	70	84.034	ENSCHOG00000000088	TNRC6C	76	84.034	Choloepus_hoffmanni
ENSCAPG00000007307	TNRC6C	93	80.227	ENSCPBG00000027960	TNRC6C	100	80.577	Chrysemys_picta_bellii
ENSCAPG00000007307	TNRC6C	99	83.552	ENSCANG00000041771	TNRC6C	100	84.412	Colobus_angolensis_palliatus
ENSCAPG00000007307	TNRC6C	99	84.118	ENSCGRG00001022686	Tnrc6c	100	84.506	Cricetulus_griseus_chok1gshd
ENSCAPG00000007307	TNRC6C	99	84.118	ENSCGRG00000018041	Tnrc6c	100	84.506	Cricetulus_griseus_crigri
ENSCAPG00000007307	TNRC6C	97	44.843	ENSCSEG00000012744	tnrc6c1	98	44.641	Cynoglossus_semilaevis
ENSCAPG00000007307	TNRC6C	97	49.496	ENSDARG00000076847	tnrc6c1	81	55.564	Danio_rerio
ENSCAPG00000007307	TNRC6C	99	79.634	ENSDNOG00000003247	TNRC6C	98	79.498	Dasypus_novemcinctus
ENSCAPG00000007307	TNRC6C	99	81.057	ENSDORG00000004558	Tnrc6c	100	81.283	Dipodomys_ordii
ENSCAPG00000007307	TNRC6C	83	75.345	ENSETEG00000005527	TNRC6C	90	75.431	Echinops_telfairi
ENSCAPG00000007307	TNRC6C	89	84.002	ENSEASG00005004799	TNRC6C	100	83.500	Equus_asinus_asinus
ENSCAPG00000007307	TNRC6C	99	83.797	ENSECAG00000012486	TNRC6C	99	83.342	Equus_caballus
ENSCAPG00000007307	TNRC6C	88	86.802	ENSEEUG00000010008	TNRC6C	96	84.095	Erinaceus_europaeus
ENSCAPG00000007307	TNRC6C	99	80.544	ENSFCAG00000028358	TNRC6C	100	82.000	Felis_catus
ENSCAPG00000007307	TNRC6C	89	77.514	ENSFALG00000000848	TNRC6C	100	77.401	Ficedula_albicollis
ENSCAPG00000007307	TNRC6C	92	87.830	ENSFDAG00000010368	TNRC6C	100	87.945	Fukomys_damarensis
ENSCAPG00000007307	TNRC6C	71	47.675	ENSFHEG00000002936	tnrc6c1	99	43.004	Fundulus_heteroclitus
ENSCAPG00000007307	TNRC6C	93	79.215	ENSGALG00000001725	TNRC6C	100	81.014	Gallus_gallus
ENSCAPG00000007307	TNRC6C	97	45.273	ENSGAFG00000019019	tnrc6c1	100	45.967	Gambusia_affinis
ENSCAPG00000007307	TNRC6C	90	50.499	ENSGACG00000012320	tnrc6c1	97	46.502	Gasterosteus_aculeatus
ENSCAPG00000007307	TNRC6C	93	79.502	ENSGAGG00000022043	TNRC6C	99	79.372	Gopherus_agassizii
ENSCAPG00000007307	TNRC6C	99	83.717	ENSGGOG00000011304	TNRC6C	100	84.353	Gorilla_gorilla
ENSCAPG00000007307	TNRC6C	97	46.572	ENSHBUG00000010846	tnrc6c1	94	49.854	Haplochromis_burtoni
ENSCAPG00000007307	TNRC6C	99	88.289	ENSHGLG00000004809	TNRC6C	98	88.075	Heterocephalus_glaber_female
ENSCAPG00000007307	TNRC6C	99	88.128	ENSHGLG00100012597	TNRC6C	98	88.289	Heterocephalus_glaber_male
ENSCAPG00000007307	TNRC6C	98	48.756	ENSIPUG00000000818	tnrc6c1	91	55.896	Ictalurus_punctatus
ENSCAPG00000007307	TNRC6C	99	85.524	ENSSTOG00000009101	TNRC6C	100	84.725	Ictidomys_tridecemlineatus
ENSCAPG00000007307	TNRC6C	99	84.373	ENSJJAG00000017055	Tnrc6c	98	84.267	Jaculus_jaculus
ENSCAPG00000007307	TNRC6C	99	43.884	ENSKMAG00000021023	tnrc6c1	100	46.334	Kryptolebias_marmoratus
ENSCAPG00000007307	TNRC6C	92	69.864	ENSLACG00000015283	TNRC6C	100	69.802	Latimeria_chalumnae
ENSCAPG00000007307	TNRC6C	99	52.196	ENSLOCG00000013377	tnrc6c1	98	52.676	Lepisosteus_oculatus
ENSCAPG00000007307	TNRC6C	99	84.537	ENSLAFG00000011122	TNRC6C	99	84.188	Loxodonta_africana
ENSCAPG00000007307	TNRC6C	99	83.971	ENSMFAG00000043943	TNRC6C	100	84.882	Macaca_fascicularis
ENSCAPG00000007307	TNRC6C	99	83.552	ENSMMUG00000011924	TNRC6C	100	84.882	Macaca_mulatta
ENSCAPG00000007307	TNRC6C	99	83.918	ENSMNEG00000030405	TNRC6C	100	84.824	Macaca_nemestrina
ENSCAPG00000007307	TNRC6C	99	83.971	ENSMLEG00000033436	TNRC6C	100	84.882	Mandrillus_leucophaeus
ENSCAPG00000007307	TNRC6C	95	48.125	ENSMAMG00000023613	tnrc6c1	100	46.607	Mastacembelus_armatus
ENSCAPG00000007307	TNRC6C	97	46.436	ENSMZEG00005010920	tnrc6c1	93	49.926	Maylandia_zebra
ENSCAPG00000007307	TNRC6C	99	72.633	ENSMGAG00000003906	TNRC6C	99	72.581	Meleagris_gallopavo
ENSCAPG00000007307	TNRC6C	89	84.829	ENSMAUG00000021618	Tnrc6c	100	84.561	Mesocricetus_auratus
ENSCAPG00000007307	TNRC6C	99	84.180	ENSMICG00000003952	TNRC6C	100	85.109	Microcebus_murinus
ENSCAPG00000007307	TNRC6C	99	85.722	ENSMOCG00000015879	Tnrc6c	100	84.774	Microtus_ochrogaster
ENSCAPG00000007307	TNRC6C	82	50.791	ENSMMOG00000005203	tnrc6c1	78	52.237	Mola_mola
ENSCAPG00000007307	TNRC6C	99	79.647	ENSMODG00000001785	TNRC6C	98	79.200	Monodelphis_domestica
ENSCAPG00000007307	TNRC6C	99	85.348	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	84.602	Mus_caroli
ENSCAPG00000007307	TNRC6C	99	85.348	ENSMUSG00000025571	Tnrc6c	100	84.602	Mus_musculus
ENSCAPG00000007307	TNRC6C	99	85.401	MGP_PahariEiJ_G0018593	Tnrc6c	100	84.659	Mus_pahari
ENSCAPG00000007307	TNRC6C	99	85.401	MGP_SPRETEiJ_G0018309	Tnrc6c	100	84.659	Mus_spretus
ENSCAPG00000007307	TNRC6C	99	79.151	ENSMPUG00000013348	TNRC6C	97	79.456	Mustela_putorius_furo
ENSCAPG00000007307	TNRC6C	99	76.312	ENSMLUG00000014431	TNRC6C	97	76.623	Myotis_lucifugus
ENSCAPG00000007307	TNRC6C	99	85.982	ENSNGAG00000012203	Tnrc6c	98	85.684	Nannospalax_galili
ENSCAPG00000007307	TNRC6C	93	46.441	ENSNBRG00000005344	tnrc6c1	75	49.781	Neolamprologus_brichardi
ENSCAPG00000007307	TNRC6C	99	81.823	ENSNLEG00000000047	TNRC6C	98	81.538	Nomascus_leucogenys
ENSCAPG00000007307	TNRC6C	90	73.974	ENSMEUG00000005104	TNRC6C	100	74.429	Notamacropus_eugenii
ENSCAPG00000007307	TNRC6C	89	88.771	ENSODEG00000012499	TNRC6C	100	88.961	Octodon_degus
ENSCAPG00000007307	TNRC6C	89	47.007	ENSONIG00000002210	tnrc6c1	94	52.884	Oreochromis_niloticus
ENSCAPG00000007307	TNRC6C	99	56.865	ENSOANG00000009758	-	99	57.587	Ornithorhynchus_anatinus
ENSCAPG00000007307	TNRC6C	82	75.826	ENSOCUG00000006122	TNRC6C	59	73.690	Oryctolagus_cuniculus
ENSCAPG00000007307	TNRC6C	93	44.232	ENSORLG00000009837	tnrc6c1	100	61.338	Oryzias_latipes
ENSCAPG00000007307	TNRC6C	93	43.326	ENSORLG00020016510	tnrc6c1	100	45.339	Oryzias_latipes_hni
ENSCAPG00000007307	TNRC6C	76	39.948	ENSORLG00015000171	tnrc6c1	98	40.815	Oryzias_latipes_hsok
ENSCAPG00000007307	TNRC6C	93	44.415	ENSOMEG00000000357	tnrc6c1	99	44.902	Oryzias_melastigma
ENSCAPG00000007307	TNRC6C	89	82.275	ENSOGAG00000007197	TNRC6C	100	81.997	Otolemur_garnettii
ENSCAPG00000007307	TNRC6C	95	77.481	ENSOARG00000006041	TNRC6C	97	77.397	Ovis_aries
ENSCAPG00000007307	TNRC6C	99	84.285	ENSPPAG00000027160	TNRC6C	100	85.059	Pan_paniscus
ENSCAPG00000007307	TNRC6C	99	80.753	ENSPPRG00000018881	TNRC6C	100	82.235	Panthera_pardus
ENSCAPG00000007307	TNRC6C	88	81.892	ENSPTIG00000008791	TNRC6C	91	81.892	Panthera_tigris_altaica
ENSCAPG00000007307	TNRC6C	99	84.390	ENSPTRG00000009699	TNRC6C	100	85.227	Pan_troglodytes
ENSCAPG00000007307	TNRC6C	99	83.971	ENSPANG00000019994	TNRC6C	100	85.032	Papio_anubis
ENSCAPG00000007307	TNRC6C	86	47.749	ENSPKIG00000005428	tnrc6c1	99	46.749	Paramormyrops_kingsleyae
ENSCAPG00000007307	TNRC6C	92	78.698	ENSPSIG00000018069	TNRC6C	100	78.755	Pelodiscus_sinensis
ENSCAPG00000007307	TNRC6C	69	57.468	ENSPMGG00000022911	tnrc6c1	97	56.680	Periophthalmus_magnuspinnatus
ENSCAPG00000007307	TNRC6C	99	85.447	ENSPEMG00000009785	Tnrc6c	98	85.524	Peromyscus_maniculatus_bairdii
ENSCAPG00000007307	TNRC6C	51	79.835	ENSPCIG00000017421	-	99	79.385	Phascolarctos_cinereus
ENSCAPG00000007307	TNRC6C	96	45.620	ENSPFOG00000012560	tnrc6c1	98	49.550	Poecilia_formosa
ENSCAPG00000007307	TNRC6C	89	46.435	ENSPLAG00000021055	tnrc6c1	100	46.633	Poecilia_latipinna
ENSCAPG00000007307	TNRC6C	99	83.866	ENSPPYG00000008679	TNRC6C	97	83.778	Pongo_abelii
ENSCAPG00000007307	TNRC6C	83	81.991	ENSPCAG00000012510	TNRC6C	91	82.464	Procavia_capensis
ENSCAPG00000007307	TNRC6C	89	85.504	ENSPCOG00000021451	TNRC6C	100	85.344	Propithecus_coquereli
ENSCAPG00000007307	TNRC6C	88	85.593	ENSPVAG00000002008	TNRC6C	96	85.593	Pteropus_vampyrus
ENSCAPG00000007307	TNRC6C	93	45.232	ENSPNYG00000014477	tnrc6c1	94	49.599	Pundamilia_nyererei
ENSCAPG00000007307	TNRC6C	89	84.375	ENSRNOG00000022395	Tnrc6c	100	84.226	Rattus_norvegicus
ENSCAPG00000007307	TNRC6C	99	83.814	ENSRBIG00000027777	TNRC6C	100	84.706	Rhinopithecus_bieti
ENSCAPG00000007307	TNRC6C	99	83.866	ENSRROG00000042912	TNRC6C	100	84.765	Rhinopithecus_roxellana
ENSCAPG00000007307	TNRC6C	99	83.342	ENSSBOG00000023981	TNRC6C	99	83.473	Saimiri_boliviensis_boliviensis
ENSCAPG00000007307	TNRC6C	61	51.331	ENSSFOG00015004735	-	99	57.180	Scleropages_formosus
ENSCAPG00000007307	TNRC6C	92	54.235	ENSSFOG00015006475	tnrc6c1	91	55.316	Scleropages_formosus
ENSCAPG00000007307	TNRC6C	93	44.632	ENSSMAG00000012761	tnrc6c1	100	44.879	Scophthalmus_maximus
ENSCAPG00000007307	TNRC6C	93	46.877	ENSSDUG00000002366	tnrc6c1	98	47.212	Seriola_dumerili
ENSCAPG00000007307	TNRC6C	89	45.932	ENSSLDG00000025613	tnrc6c1	100	46.354	Seriola_lalandi_dorsalis
ENSCAPG00000007307	TNRC6C	84	84.874	ENSSARG00000006816	TNRC6C	91	84.874	Sorex_araneus
ENSCAPG00000007307	TNRC6C	79	79.381	ENSSPUG00000007341	TNRC6C	97	79.381	Sphenodon_punctatus
ENSCAPG00000007307	TNRC6C	70	49.008	ENSSPAG00000014977	tnrc6c1	98	44.809	Stegastes_partitus
ENSCAPG00000007307	TNRC6C	89	78.736	ENSSSCG00000034373	TNRC6C	100	80.000	Sus_scrofa
ENSCAPG00000007307	TNRC6C	92	80.549	ENSTGUG00000007733	TNRC6C	100	80.457	Taeniopygia_guttata
ENSCAPG00000007307	TNRC6C	71	48.821	ENSTRUG00000011685	tnrc6c1	78	49.375	Takifugu_rubripes
ENSCAPG00000007307	TNRC6C	93	50.360	ENSTNIG00000005273	tnrc6c1	100	53.592	Tetraodon_nigroviridis
ENSCAPG00000007307	TNRC6C	56	78.005	ENSTBEG00000005046	TNRC6C	98	73.563	Tupaia_belangeri
ENSCAPG00000007307	TNRC6C	92	82.895	ENSTTRG00000010828	TNRC6C	99	82.629	Tursiops_truncatus
ENSCAPG00000007307	TNRC6C	99	80.818	ENSUMAG00000013614	TNRC6C	99	81.379	Ursus_maritimus
ENSCAPG00000007307	TNRC6C	89	84.484	ENSVVUG00000015268	TNRC6C	100	84.158	Vulpes_vulpes
ENSCAPG00000007307	TNRC6C	89	69.487	ENSXETG00000019470	tnrc6c	100	69.514	Xenopus_tropicalis
ENSCAPG00000007307	TNRC6C	97	45.068	ENSXMAG00000025971	tnrc6c1	99	47.352	Xiphophorus_maculatus