EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000007934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 438 bases
Position: chrAVPZ01000478.1:10068515-10068952
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000005662	zf-C2H2	PF00096.26	8.4e-06	1	2
ENSCAPP00000005662	zf-C2H2	PF00096.26	8.4e-06	2	2
ENSCAPP00000005662	zf-met	PF12874.7	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000009248	-	297	-	ENSCAPP00000005662	99 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000007934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000007934	-	81	41.538	ENSCAPG00000002667	-	63	41.538
ENSCAPG00000007934	-	68	35.385	ENSCAPG00000015217	PRDM5	63	35.000
ENSCAPG00000007934	-	99	41.538	ENSCAPG00000003129	-	64	41.538
ENSCAPG00000007934	-	97	41.538	ENSCAPG00000006920	-	64	41.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000007934	-	68	47.475	ENSACAG00000022971	-	78	47.475	Anolis_carolinensis
ENSCAPG00000007934	-	100	100.000	ENSCPOG00000030326	-	64	100.000	Cavia_porcellus
ENSCAPG00000007934	-	100	98.990	ENSCLAG00000014824	-	72	98.990	Chinchilla_lanigera
ENSCAPG00000007934	-	100	87.879	ENSFDAG00000004155	-	100	87.879	Fukomys_damarensis
ENSCAPG00000007934	-	100	88.889	ENSHGLG00000015654	-	100	88.889	Heterocephalus_glaber_female
ENSCAPG00000007934	-	100	88.889	ENSHGLG00100005041	-	100	88.889	Heterocephalus_glaber_male
ENSCAPG00000007934	-	100	96.970	ENSODEG00000014837	-	100	96.970	Octodon_degus
ENSCAPG00000007934	-	81	67.901	ENSSHAG00000009882	ZBTB16	79	67.901	Sarcophilus_harrisii
ENSCAPG00000007934	-	81	65.432	ENSXCOG00000018615	-	63	65.432	Xiphophorus_couchianus