EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000007984 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 61361 bases
Position: chrAVPZ01000445.1:33308039-33369399
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000005739	RNA_bind	PF08675.11	7.9e-15	1	1
ENSCAPP00000005739	CAF1	PF04857.20	2.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000009325	PARN-201	1488	-	ENSCAPP00000005739	495 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000007984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000007984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000007984	PARN	78	63.825	ENSG00000140694	PARN	94	61.215	Homo_sapiens
ENSCAPG00000007984	PARN	78	62.578	ENSAMEG00000011208	PARN	73	62.578	Ailuropoda_melanoleuca
ENSCAPG00000007984	PARN	78	55.876	ENSACIG00000000619	parn	72	53.632	Amphilophus_citrinellus
ENSCAPG00000007984	PARN	78	51.139	ENSAOCG00000003465	parn	68	51.139	Amphiprion_ocellaris
ENSCAPG00000007984	PARN	68	51.522	ENSAPEG00000010661	parn	79	51.522	Amphiprion_percula
ENSCAPG00000007984	PARN	78	51.975	ENSATEG00000004661	parn	68	51.975	Anabas_testudineus
ENSCAPG00000007984	PARN	78	59.875	ENSAPLG00000013914	PARN	74	60.455	Anas_platyrhynchos
ENSCAPG00000007984	PARN	78	57.261	ENSACAG00000004973	PARN	72	57.261	Anolis_carolinensis
ENSCAPG00000007984	PARN	78	63.147	ENSANAG00000031516	PARN	60	77.500	Aotus_nancymaae
ENSCAPG00000007984	PARN	78	51.351	ENSACLG00000004742	parn	69	51.351	Astatotilapia_calliptera
ENSCAPG00000007984	PARN	78	50.529	ENSAMXG00000012390	parn	76	50.529	Astyanax_mexicanus
ENSCAPG00000007984	PARN	78	62.198	ENSBTAG00000018097	PARN	76	59.920	Bos_taurus
ENSCAPG00000007984	PARN	78	63.410	ENSCJAG00000015866	PARN	60	77.500	Callithrix_jacchus
ENSCAPG00000007984	PARN	78	62.162	ENSCAFG00000018795	PARN	73	62.162	Canis_familiaris
ENSCAPG00000007984	PARN	78	62.370	ENSCAFG00020024126	PARN	73	62.370	Canis_lupus_dingo
ENSCAPG00000007984	PARN	78	62.578	ENSCHIG00000018143	PARN	73	62.578	Capra_hircus
ENSCAPG00000007984	PARN	78	68.319	ENSCPOG00000002263	PARN	74	68.319	Cavia_porcellus
ENSCAPG00000007984	PARN	78	63.202	ENSCCAG00000030367	PARN	60	77.500	Cebus_capucinus
ENSCAPG00000007984	PARN	78	63.825	ENSCATG00000041368	PARN	84	63.825	Cercocebus_atys
ENSCAPG00000007984	PARN	78	63.617	ENSCLAG00000015406	PARN	73	63.617	Chinchilla_lanigera
ENSCAPG00000007984	PARN	78	64.033	ENSCSAG00000008142	PARN	73	64.033	Chlorocebus_sabaeus
ENSCAPG00000007984	PARN	71	61.348	ENSCHOG00000007014	PARN	71	61.348	Choloepus_hoffmanni
ENSCAPG00000007984	PARN	68	60.890	ENSCPBG00000006609	PARN	72	60.890	Chrysemys_picta_bellii
ENSCAPG00000007984	PARN	78	30.185	ENSCING00000010142	-	91	30.185	Ciona_intestinalis
ENSCAPG00000007984	PARN	71	61.009	ENSCANG00000028849	-	56	77.500	Colobus_angolensis_palliatus
ENSCAPG00000007984	PARN	78	60.707	ENSCGRG00001012096	Parn	74	60.707	Cricetulus_griseus_chok1gshd
ENSCAPG00000007984	PARN	78	60.707	ENSCGRG00000004939	Parn	74	60.707	Cricetulus_griseus_crigri
ENSCAPG00000007984	PARN	78	51.648	ENSCSEG00000002064	parn	96	42.523	Cynoglossus_semilaevis
ENSCAPG00000007984	PARN	78	50.728	ENSCVAG00000014848	parn	69	50.728	Cyprinodon_variegatus
ENSCAPG00000007984	PARN	78	48.025	ENSDARG00000102634	parn	77	44.371	Danio_rerio
ENSCAPG00000007984	PARN	78	61.905	ENSDNOG00000000833	PARN	83	61.905	Dasypus_novemcinctus
ENSCAPG00000007984	PARN	71	64.341	ENSETEG00000014828	-	65	64.341	Echinops_telfairi
ENSCAPG00000007984	PARN	78	62.162	ENSEASG00005011400	PARN	73	62.162	Equus_asinus_asinus
ENSCAPG00000007984	PARN	78	62.630	ENSECAG00000017792	PARN	73	62.630	Equus_caballus
ENSCAPG00000007984	PARN	59	92.683	ENSEEUG00000010370	PARN	51	92.683	Erinaceus_europaeus
ENSCAPG00000007984	PARN	79	49.898	ENSELUG00000013139	parn	63	49.898	Esox_lucius
ENSCAPG00000007984	PARN	78	62.370	ENSFCAG00000044961	PARN	73	62.370	Felis_catus
ENSCAPG00000007984	PARN	78	59.420	ENSFALG00000003911	PARN	73	59.875	Ficedula_albicollis
ENSCAPG00000007984	PARN	78	64.449	ENSFDAG00000009234	PARN	73	64.449	Fukomys_damarensis
ENSCAPG00000007984	PARN	78	49.567	ENSFHEG00000013738	parn	72	49.567	Fundulus_heteroclitus
ENSCAPG00000007984	PARN	78	51.042	ENSGMOG00000003231	parn	85	51.042	Gadus_morhua
ENSCAPG00000007984	PARN	78	59.627	ENSGALG00000003091	PARN	74	60.455	Gallus_gallus
ENSCAPG00000007984	PARN	78	51.559	ENSGAFG00000011061	parn	68	51.559	Gambusia_affinis
ENSCAPG00000007984	PARN	78	51.351	ENSGACG00000019501	parn	75	51.351	Gasterosteus_aculeatus
ENSCAPG00000007984	PARN	78	63.825	ENSGGOG00000025224	PARN	63	77.500	Gorilla_gorilla
ENSCAPG00000007984	PARN	78	51.351	ENSHBUG00000017906	parn	79	49.587	Haplochromis_burtoni
ENSCAPG00000007984	PARN	78	64.241	ENSHGLG00000010886	PARN	73	64.241	Heterocephalus_glaber_female
ENSCAPG00000007984	PARN	78	64.241	ENSHGLG00100014659	PARN	73	64.241	Heterocephalus_glaber_male
ENSCAPG00000007984	PARN	78	47.689	ENSHCOG00000008683	parn	80	47.689	Hippocampus_comes
ENSCAPG00000007984	PARN	78	47.111	ENSIPUG00000012401	parn	68	47.333	Ictalurus_punctatus
ENSCAPG00000007984	PARN	78	61.954	ENSSTOG00000007519	PARN	74	61.954	Ictidomys_tridecemlineatus
ENSCAPG00000007984	PARN	78	61.331	ENSJJAG00000023049	Parn	75	61.331	Jaculus_jaculus
ENSCAPG00000007984	PARN	78	50.936	ENSKMAG00000009462	parn	69	50.936	Kryptolebias_marmoratus
ENSCAPG00000007984	PARN	78	51.346	ENSLBEG00000009167	parn	73	51.346	Labrus_bergylta
ENSCAPG00000007984	PARN	78	52.830	ENSLACG00000004207	PARN	95	50.584	Latimeria_chalumnae
ENSCAPG00000007984	PARN	79	52.846	ENSLOCG00000000715	parn	70	52.846	Lepisosteus_oculatus
ENSCAPG00000007984	PARN	78	61.954	ENSLAFG00000015036	PARN	74	61.954	Loxodonta_africana
ENSCAPG00000007984	PARN	78	64.516	ENSMFAG00000044852	PARN	60	77.500	Macaca_fascicularis
ENSCAPG00000007984	PARN	78	63.825	ENSMMUG00000018849	PARN	60	77.500	Macaca_mulatta
ENSCAPG00000007984	PARN	78	64.516	ENSMNEG00000045108	PARN	60	77.500	Macaca_nemestrina
ENSCAPG00000007984	PARN	78	63.825	ENSMLEG00000031743	PARN	60	77.500	Mandrillus_leucophaeus
ENSCAPG00000007984	PARN	78	50.728	ENSMAMG00000006939	parn	68	50.728	Mastacembelus_armatus
ENSCAPG00000007984	PARN	78	51.351	ENSMZEG00005013590	parn	79	51.240	Maylandia_zebra
ENSCAPG00000007984	PARN	74	59.565	ENSMGAG00000001004	PARN	70	59.565	Meleagris_gallopavo
ENSCAPG00000007984	PARN	78	58.678	ENSMAUG00000008025	Parn	73	58.678	Mesocricetus_auratus
ENSCAPG00000007984	PARN	78	63.825	ENSMICG00000016053	PARN	73	63.825	Microcebus_murinus
ENSCAPG00000007984	PARN	82	58.691	ENSMOCG00000022211	Parn	99	58.691	Microtus_ochrogaster
ENSCAPG00000007984	PARN	78	52.110	ENSMMOG00000011333	parn	76	52.110	Mola_mola
ENSCAPG00000007984	PARN	82	60.239	ENSMODG00000004915	PARN	98	60.239	Monodelphis_domestica
ENSCAPG00000007984	PARN	78	51.351	ENSMALG00000019426	parn	79	51.351	Monopterus_albus
ENSCAPG00000007984	PARN	78	59.875	MGP_CAROLIEiJ_G0020466	Parn	74	59.875	Mus_caroli
ENSCAPG00000007984	PARN	78	60.083	ENSMUSG00000022685	Parn	91	70.130	Mus_musculus
ENSCAPG00000007984	PARN	78	59.667	MGP_PahariEiJ_G0016172	Parn	74	59.667	Mus_pahari
ENSCAPG00000007984	PARN	78	59.875	MGP_SPRETEiJ_G0021361	Parn	74	59.875	Mus_spretus
ENSCAPG00000007984	PARN	78	62.786	ENSMPUG00000014464	PARN	73	62.786	Mustela_putorius_furo
ENSCAPG00000007984	PARN	78	62.526	ENSMLUG00000005414	PARN	95	62.526	Myotis_lucifugus
ENSCAPG00000007984	PARN	78	50.737	ENSNBRG00000006805	parn	79	50.737	Neolamprologus_brichardi
ENSCAPG00000007984	PARN	78	63.617	ENSNLEG00000010241	PARN	60	77.500	Nomascus_leucogenys
ENSCAPG00000007984	PARN	78	58.385	ENSOPRG00000012187	PARN	74	58.385	Ochotona_princeps
ENSCAPG00000007984	PARN	78	64.859	ENSODEG00000001617	PARN	75	64.859	Octodon_degus
ENSCAPG00000007984	PARN	78	51.975	ENSONIG00000000151	parn	72	51.975	Oreochromis_niloticus
ENSCAPG00000007984	PARN	78	62.578	ENSOCUG00000000322	PARN	74	62.578	Oryctolagus_cuniculus
ENSCAPG00000007984	PARN	79	50.813	ENSORLG00020010313	parn	71	50.813	Oryzias_latipes_hni
ENSCAPG00000007984	PARN	79	50.813	ENSORLG00015000300	parn	71	50.813	Oryzias_latipes_hsok
ENSCAPG00000007984	PARN	79	50.813	ENSOMEG00000019555	parn	93	45.327	Oryzias_melastigma
ENSCAPG00000007984	PARN	78	60.248	ENSOGAG00000014626	PARN	95	60.248	Otolemur_garnettii
ENSCAPG00000007984	PARN	78	62.578	ENSOARG00000007574	PARN	95	62.578	Ovis_aries
ENSCAPG00000007984	PARN	78	65.284	ENSPPAG00000031438	PARN	60	77.500	Pan_paniscus
ENSCAPG00000007984	PARN	78	62.162	ENSPPRG00000018583	PARN	73	62.162	Panthera_pardus
ENSCAPG00000007984	PARN	78	62.370	ENSPTIG00000012135	PARN	73	62.370	Panthera_tigris_altaica
ENSCAPG00000007984	PARN	78	64.847	ENSPTRG00000007792	PARN	60	77.500	Pan_troglodytes
ENSCAPG00000007984	PARN	78	60.000	ENSPANG00000020099	PARN	60	77.500	Papio_anubis
ENSCAPG00000007984	PARN	79	49.290	ENSPKIG00000022807	parn	76	49.184	Paramormyrops_kingsleyae
ENSCAPG00000007984	PARN	78	59.667	ENSPSIG00000014804	PARN	73	59.667	Pelodiscus_sinensis
ENSCAPG00000007984	PARN	78	52.155	ENSPMGG00000014431	parn	65	52.586	Periophthalmus_magnuspinnatus
ENSCAPG00000007984	PARN	78	59.052	ENSPEMG00000018439	Parn	73	59.052	Peromyscus_maniculatus_bairdii
ENSCAPG00000007984	PARN	78	43.606	ENSPMAG00000003956	parn	89	43.724	Petromyzon_marinus
ENSCAPG00000007984	PARN	70	57.606	ENSPCIG00000001259	PARN	90	56.174	Phascolarctos_cinereus
ENSCAPG00000007984	PARN	78	51.143	ENSPFOG00000012823	parn	69	51.143	Poecilia_formosa
ENSCAPG00000007984	PARN	78	51.351	ENSPLAG00000006395	parn	69	51.351	Poecilia_latipinna
ENSCAPG00000007984	PARN	78	51.351	ENSPMEG00000007711	parn	69	51.351	Poecilia_mexicana
ENSCAPG00000007984	PARN	78	51.143	ENSPREG00000000147	parn	69	51.143	Poecilia_reticulata
ENSCAPG00000007984	PARN	78	63.561	ENSPPYG00000007123	PARN	73	63.561	Pongo_abelii
ENSCAPG00000007984	PARN	70	56.659	ENSPCAG00000001741	PARN	71	56.659	Procavia_capensis
ENSCAPG00000007984	PARN	78	63.305	ENSPCOG00000019292	PARN	73	63.305	Propithecus_coquereli
ENSCAPG00000007984	PARN	78	58.884	ENSPVAG00000002547	PARN	74	58.884	Pteropus_vampyrus
ENSCAPG00000007984	PARN	78	51.351	ENSPNYG00000006835	parn	79	48.017	Pundamilia_nyererei
ENSCAPG00000007984	PARN	69	49.885	ENSPNAG00000018905	parn	70	49.885	Pygocentrus_nattereri
ENSCAPG00000007984	PARN	78	59.420	ENSRNOG00000002912	Parn	98	67.677	Rattus_norvegicus
ENSCAPG00000007984	PARN	78	63.539	ENSSBOG00000034726	PARN	60	77.500	Saimiri_boliviensis_boliviensis
ENSCAPG00000007984	PARN	70	58.548	ENSSHAG00000008493	PARN	92	58.548	Sarcophilus_harrisii
ENSCAPG00000007984	PARN	78	52.017	ENSSFOG00015014165	parn	77	52.017	Scleropages_formosus
ENSCAPG00000007984	PARN	78	49.480	ENSSMAG00000000685	parn	76	45.175	Scophthalmus_maximus
ENSCAPG00000007984	PARN	78	50.312	ENSSDUG00000014555	parn	68	50.312	Seriola_dumerili
ENSCAPG00000007984	PARN	68	62.998	ENSSARG00000014339	PARN	72	62.998	Sorex_araneus
ENSCAPG00000007984	PARN	78	59.213	ENSSPUG00000007719	PARN	73	59.213	Sphenodon_punctatus
ENSCAPG00000007984	PARN	78	52.916	ENSSPAG00000007095	parn	75	52.916	Stegastes_partitus
ENSCAPG00000007984	PARN	78	65.275	ENSSSCG00000007878	PARN	64	65.275	Sus_scrofa
ENSCAPG00000007984	PARN	78	59.213	ENSTGUG00000004971	PARN	73	59.667	Taeniopygia_guttata
ENSCAPG00000007984	PARN	78	50.932	ENSTNIG00000008252	parn	75	50.936	Tetraodon_nigroviridis
ENSCAPG00000007984	PARN	68	56.829	ENSTBEG00000010407	PARN	71	56.829	Tupaia_belangeri
ENSCAPG00000007984	PARN	78	61.954	ENSTTRG00000002843	PARN	74	61.954	Tursiops_truncatus
ENSCAPG00000007984	PARN	68	57.488	ENSUAMG00000008283	PARN	95	52.681	Ursus_americanus
ENSCAPG00000007984	PARN	78	62.578	ENSUMAG00000004527	PARN	73	62.578	Ursus_maritimus
ENSCAPG00000007984	PARN	78	59.129	ENSVPAG00000008968	PARN	76	59.129	Vicugna_pacos
ENSCAPG00000007984	PARN	78	62.370	ENSVVUG00000019509	PARN	73	62.370	Vulpes_vulpes
ENSCAPG00000007984	PARN	78	54.167	ENSXETG00000010994	parn	89	54.167	Xenopus_tropicalis
ENSCAPG00000007984	PARN	78	52.586	ENSXCOG00000015990	parn	79	52.586	Xiphophorus_couchianus
ENSCAPG00000007984	PARN	78	51.559	ENSXMAG00000014783	parn	69	51.559	Xiphophorus_maculatus