EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008103 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 3180 bases
Position: chrAVPZ01000056.1:40715156-40718335
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000005878	LSM	PF01423.22	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000009465	SNRPD1-201	351	-	ENSCAPP00000005878	116 (aa)	-	UPI000BAD4211

Gene Model

Click here to download ENSCAPG00000008103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008103	SNRPD1	99	99.130	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSCAPG00000008103	SNRPD1	93	95.370	ENSAPOG00000019446	snrpd1	59	95.370	Acanthochromis_polyacanthus
ENSCAPG00000008103	SNRPD1	100	98.276	ENSAMEG00000002576	SNRPD1	99	98.276	Ailuropoda_melanoleuca
ENSCAPG00000008103	SNRPD1	97	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSAOCG00000007406	snrpd1	91	95.370	Amphiprion_ocellaris
ENSCAPG00000008103	SNRPD1	97	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSCAPG00000008103	SNRPD1	93	90.741	ENSAPEG00000014961	snrpd1	90	90.741	Amphiprion_percula
ENSCAPG00000008103	SNRPD1	97	96.429	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSAPLG00000012256	SNRPD1	97	99.130	Anas_platyrhynchos
ENSCAPG00000008103	SNRPD1	99	99.130	ENSACAG00000006364	SNRPD1	97	99.130	Anolis_carolinensis
ENSCAPG00000008103	SNRPD1	99	99.130	ENSANAG00000025641	SNRPD1	97	99.130	Aotus_nancymaae
ENSCAPG00000008103	SNRPD1	97	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSCAPG00000008103	SNRPD1	99	96.522	ENSAMXG00000004589	snrpd1	97	96.522	Astyanax_mexicanus
ENSCAPG00000008103	SNRPD1	98	90.351	ENSBTAG00000055316	-	91	90.351	Bos_taurus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSBTAG00000008292	SNRPD1	97	99.130	Bos_taurus
ENSCAPG00000008103	SNRPD1	79	96.739	ENSBTAG00000012376	-	69	96.739	Bos_taurus
ENSCAPG00000008103	SNRPD1	93	96.296	ENSBTAG00000047266	-	91	96.296	Bos_taurus
ENSCAPG00000008103	SNRPD1	72	78.571	WBGene00004916	snr-3	73	73.913	Caenorhabditis_elegans
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCJAG00000042955	SNRPD1	97	99.130	Callithrix_jacchus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCAFG00000018247	SNRPD1	97	99.130	Canis_familiaris
ENSCAPG00000008103	SNRPD1	78	98.901	ENSCAFG00020015914	SNRPD1	71	98.901	Canis_lupus_dingo
ENSCAPG00000008103	SNRPD1	100	98.276	ENSCHIG00000005557	SNRPD1	97	98.276	Capra_hircus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSTSYG00000030028	SNRPD1	97	99.130	Carlito_syrichta
ENSCAPG00000008103	SNRPD1	100	100.000	ENSCPOG00000004679	SNRPD1	100	100.000	Cavia_porcellus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCCAG00000032658	SNRPD1	97	99.130	Cebus_capucinus
ENSCAPG00000008103	SNRPD1	79	94.565	ENSCCAG00000005390	-	77	94.565	Cebus_capucinus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSCCAG00000016652	-	91	95.370	Cebus_capucinus
ENSCAPG00000008103	SNRPD1	99	98.261	ENSCCAG00000020611	-	97	98.261	Cebus_capucinus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCATG00000039978	SNRPD1	97	99.130	Cercocebus_atys
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCLAG00000008691	SNRPD1	97	99.130	Chinchilla_lanigera
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCSAG00000017654	SNRPD1	97	99.130	Chlorocebus_sabaeus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSCPBG00000023143	SNRPD1	97	99.130	Chrysemys_picta_bellii
ENSCAPG00000008103	SNRPD1	71	86.585	ENSCING00000024100	-	66	86.585	Ciona_intestinalis
ENSCAPG00000008103	SNRPD1	72	84.337	ENSCSAVG00000004578	-	66	84.337	Ciona_savignyi
ENSCAPG00000008103	SNRPD1	79	73.913	ENSCGRG00001009945	-	81	73.913	Cricetulus_griseus_chok1gshd
ENSCAPG00000008103	SNRPD1	100	98.276	ENSCGRG00001021055	-	97	99.130	Cricetulus_griseus_chok1gshd
ENSCAPG00000008103	SNRPD1	100	98.276	ENSCGRG00000000490	-	97	99.130	Cricetulus_griseus_crigri
ENSCAPG00000008103	SNRPD1	79	73.913	ENSCGRG00000006224	-	81	73.913	Cricetulus_griseus_crigri
ENSCAPG00000008103	SNRPD1	78	93.407	ENSCSEG00000018141	snrpd1	77	93.478	Cynoglossus_semilaevis
ENSCAPG00000008103	SNRPD1	93	95.370	ENSCVAG00000000534	snrpd1	91	95.370	Cyprinodon_variegatus
ENSCAPG00000008103	SNRPD1	99	96.522	ENSDARG00000011648	snrpd1	97	96.522	Danio_rerio
ENSCAPG00000008103	SNRPD1	99	99.130	ENSDNOG00000040310	SNRPD1	97	99.130	Dasypus_novemcinctus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSDORG00000008349	Snrpd1	97	99.130	Dipodomys_ordii
ENSCAPG00000008103	SNRPD1	78	81.111	FBgn0261933	SmD1	73	81.111	Drosophila_melanogaster
ENSCAPG00000008103	SNRPD1	76	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSCAPG00000008103	SNRPD1	93	91.667	ENSEBUG00000003170	snrpd1	91	91.667	Eptatretus_burgeri
ENSCAPG00000008103	SNRPD1	97	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSCAPG00000008103	SNRPD1	97	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSCAPG00000008103	SNRPD1	77	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSCAPG00000008103	SNRPD1	92	84.112	ENSELUG00000000088	snrpd1	76	94.444	Esox_lucius
ENSCAPG00000008103	SNRPD1	99	99.130	ENSFCAG00000012352	SNRPD1	97	99.130	Felis_catus
ENSCAPG00000008103	SNRPD1	97	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSCAPG00000008103	SNRPD1	99	96.522	ENSGMOG00000015607	snrpd1	97	96.522	Gadus_morhua
ENSCAPG00000008103	SNRPD1	99	99.130	ENSGALG00000041334	SNRPD1	97	99.130	Gallus_gallus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSGAFG00000011171	snrpd1	91	95.370	Gambusia_affinis
ENSCAPG00000008103	SNRPD1	99	96.522	ENSGACG00000005201	SNRPD1	97	96.522	Gasterosteus_aculeatus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSGAGG00000011197	SNRPD1	97	99.130	Gopherus_agassizii
ENSCAPG00000008103	SNRPD1	99	99.130	ENSGGOG00000041053	SNRPD1	97	99.130	Gorilla_gorilla
ENSCAPG00000008103	SNRPD1	79	93.478	ENSGGOG00000026706	-	77	93.478	Gorilla_gorilla
ENSCAPG00000008103	SNRPD1	93	95.370	ENSHBUG00000003236	snrpd1	91	95.370	Haplochromis_burtoni
ENSCAPG00000008103	SNRPD1	99	99.130	ENSHGLG00000007152	SNRPD1	97	99.130	Heterocephalus_glaber_female
ENSCAPG00000008103	SNRPD1	99	99.130	ENSHGLG00100008618	SNRPD1	97	99.130	Heterocephalus_glaber_male
ENSCAPG00000008103	SNRPD1	93	95.370	ENSIPUG00000003576	snrpd1	91	95.370	Ictalurus_punctatus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSSTOG00000000485	SNRPD1	97	100.000	Ictidomys_tridecemlineatus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSJJAG00000017698	Snrpd1	97	99.130	Jaculus_jaculus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSKMAG00000005987	snrpd1	91	95.370	Kryptolebias_marmoratus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSLBEG00000003327	snrpd1	91	95.370	Labrus_bergylta
ENSCAPG00000008103	SNRPD1	99	99.130	ENSLACG00000001955	SNRPD1	97	99.130	Latimeria_chalumnae
ENSCAPG00000008103	SNRPD1	99	97.391	ENSLOCG00000002003	snrpd1	98	97.391	Lepisosteus_oculatus
ENSCAPG00000008103	SNRPD1	100	98.276	ENSLAFG00000005819	SNRPD1	98	98.276	Loxodonta_africana
ENSCAPG00000008103	SNRPD1	99	99.130	ENSMFAG00000042080	SNRPD1	97	99.130	Macaca_fascicularis
ENSCAPG00000008103	SNRPD1	98	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSCAPG00000008103	SNRPD1	99	99.130	ENSMNEG00000041296	SNRPD1	97	99.130	Macaca_nemestrina
ENSCAPG00000008103	SNRPD1	100	98.276	ENSMLEG00000028659	SNRPD1	97	99.130	Mandrillus_leucophaeus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSMAMG00000012971	snrpd1	91	95.370	Mastacembelus_armatus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSMZEG00005004685	snrpd1	91	95.370	Maylandia_zebra
ENSCAPG00000008103	SNRPD1	99	99.130	ENSMGAG00000011598	SNRPD1	95	99.130	Meleagris_gallopavo
ENSCAPG00000008103	SNRPD1	79	82.609	ENSMAUG00000016502	-	83	82.609	Mesocricetus_auratus
ENSCAPG00000008103	SNRPD1	84	92.857	ENSMAUG00000006829	-	63	92.857	Mesocricetus_auratus
ENSCAPG00000008103	SNRPD1	79	82.609	ENSMAUG00000016467	-	83	82.609	Mesocricetus_auratus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSMICG00000044066	SNRPD1	97	99.130	Microcebus_murinus
ENSCAPG00000008103	SNRPD1	100	99.138	ENSMOCG00000017367	Snrpd1	97	99.130	Microtus_ochrogaster
ENSCAPG00000008103	SNRPD1	93	95.370	ENSMMOG00000019089	snrpd1	91	95.370	Mola_mola
ENSCAPG00000008103	SNRPD1	99	99.130	ENSMODG00000021487	SNRPD1	98	100.000	Monodelphis_domestica
ENSCAPG00000008103	SNRPD1	93	95.370	ENSMALG00000014459	snrpd1	91	95.370	Monopterus_albus
ENSCAPG00000008103	SNRPD1	99	99.130	MGP_CAROLIEiJ_G0021994	Snrpd1	97	99.130	Mus_caroli
ENSCAPG00000008103	SNRPD1	99	99.130	ENSMUSG00000002477	Snrpd1	97	99.130	Mus_musculus
ENSCAPG00000008103	SNRPD1	99	99.130	MGP_PahariEiJ_G0018731	Snrpd1	97	99.130	Mus_pahari
ENSCAPG00000008103	SNRPD1	99	99.130	MGP_SPRETEiJ_G0022910	Snrpd1	97	99.130	Mus_spretus
ENSCAPG00000008103	SNRPD1	99	98.261	ENSMPUG00000020041	-	97	98.261	Mustela_putorius_furo
ENSCAPG00000008103	SNRPD1	100	98.276	ENSMPUG00000005567	-	99	98.276	Mustela_putorius_furo
ENSCAPG00000008103	SNRPD1	97	98.230	ENSMLUG00000009124	SNRPD1	88	98.230	Myotis_lucifugus
ENSCAPG00000008103	SNRPD1	99	100.000	ENSNGAG00000023946	Snrpd1	97	99.130	Nannospalax_galili
ENSCAPG00000008103	SNRPD1	78	94.444	ENSNBRG00000012119	snrpd1	74	94.444	Neolamprologus_brichardi
ENSCAPG00000008103	SNRPD1	99	96.522	ENSNLEG00000031430	SNRPD1	97	96.522	Nomascus_leucogenys
ENSCAPG00000008103	SNRPD1	99	99.130	ENSODEG00000005764	SNRPD1	97	99.130	Octodon_degus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSONIG00000002486	snrpd1	91	95.370	Oreochromis_niloticus
ENSCAPG00000008103	SNRPD1	84	87.755	ENSOANG00000004638	-	82	87.755	Ornithorhynchus_anatinus
ENSCAPG00000008103	SNRPD1	99	98.261	ENSOCUG00000014399	-	97	98.261	Oryctolagus_cuniculus
ENSCAPG00000008103	SNRPD1	100	98.276	ENSOCUG00000023761	-	99	98.276	Oryctolagus_cuniculus
ENSCAPG00000008103	SNRPD1	97	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSCAPG00000008103	SNRPD1	93	95.370	ENSORLG00020005743	snrpd1	91	95.370	Oryzias_latipes_hni
ENSCAPG00000008103	SNRPD1	93	95.370	ENSORLG00015013402	snrpd1	91	95.370	Oryzias_latipes_hsok
ENSCAPG00000008103	SNRPD1	93	95.370	ENSOMEG00000011571	snrpd1	91	95.370	Oryzias_melastigma
ENSCAPG00000008103	SNRPD1	99	99.130	ENSOGAG00000007833	SNRPD1	97	99.130	Otolemur_garnettii
ENSCAPG00000008103	SNRPD1	99	93.913	ENSOARG00000003413	-	82	93.913	Ovis_aries
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPPAG00000042593	SNRPD1	97	99.130	Pan_paniscus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPPRG00000002399	SNRPD1	97	99.130	Panthera_pardus
ENSCAPG00000008103	SNRPD1	79	65.217	ENSPPRG00000005009	-	88	70.370	Panthera_pardus
ENSCAPG00000008103	SNRPD1	98	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSCAPG00000008103	SNRPD1	84	92.857	ENSPTRG00000050159	-	84	92.857	Pan_troglodytes
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPTRG00000009909	SNRPD1	97	99.130	Pan_troglodytes
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPANG00000023478	SNRPD1	97	99.130	Papio_anubis
ENSCAPG00000008103	SNRPD1	99	96.522	ENSPKIG00000003985	SNRPD1	97	96.522	Paramormyrops_kingsleyae
ENSCAPG00000008103	SNRPD1	91	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSCAPG00000008103	SNRPD1	93	95.370	ENSPMGG00000001862	snrpd1	91	95.370	Periophthalmus_magnuspinnatus
ENSCAPG00000008103	SNRPD1	100	98.276	ENSPEMG00000014773	-	97	99.130	Peromyscus_maniculatus_bairdii
ENSCAPG00000008103	SNRPD1	84	82.000	ENSPMAG00000003938	-	82	82.000	Petromyzon_marinus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSCAPG00000008103	SNRPD1	79	94.565	ENSPFOG00000012448	SNRPD1	81	94.565	Poecilia_formosa
ENSCAPG00000008103	SNRPD1	79	94.565	ENSPLAG00000006738	snrpd1	81	94.565	Poecilia_latipinna
ENSCAPG00000008103	SNRPD1	79	94.565	ENSPMEG00000021942	snrpd1	81	94.565	Poecilia_mexicana
ENSCAPG00000008103	SNRPD1	93	95.370	ENSPREG00000007094	snrpd1	91	95.370	Poecilia_reticulata
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPPYG00000025874	SNRPD1	97	99.130	Pongo_abelii
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPCOG00000013327	SNRPD1	97	99.130	Propithecus_coquereli
ENSCAPG00000008103	SNRPD1	99	99.130	ENSPVAG00000005511	SNRPD1	77	99.130	Pteropus_vampyrus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSPNAG00000017824	snrpd1	91	95.370	Pygocentrus_nattereri
ENSCAPG00000008103	SNRPD1	99	99.130	ENSRNOG00000013714	Snrpd1	97	99.130	Rattus_norvegicus
ENSCAPG00000008103	SNRPD1	100	98.276	ENSRBIG00000022996	SNRPD1	97	99.130	Rhinopithecus_bieti
ENSCAPG00000008103	SNRPD1	100	98.276	ENSRROG00000027640	SNRPD1	97	99.130	Rhinopithecus_roxellana
ENSCAPG00000008103	SNRPD1	99	99.130	ENSSBOG00000020998	SNRPD1	97	99.130	Saimiri_boliviensis_boliviensis
ENSCAPG00000008103	SNRPD1	99	99.130	ENSSHAG00000011791	SNRPD1	97	99.130	Sarcophilus_harrisii
ENSCAPG00000008103	SNRPD1	93	94.444	ENSSFOG00015022253	-	91	94.444	Scleropages_formosus
ENSCAPG00000008103	SNRPD1	93	94.444	ENSSFOG00015008809	-	91	94.444	Scleropages_formosus
ENSCAPG00000008103	SNRPD1	93	94.444	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSCAPG00000008103	SNRPD1	99	96.522	ENSSDUG00000010521	snrpd1	97	96.522	Seriola_dumerili
ENSCAPG00000008103	SNRPD1	93	95.370	ENSSLDG00000011858	snrpd1	91	95.370	Seriola_lalandi_dorsalis
ENSCAPG00000008103	SNRPD1	58	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSSPUG00000002824	SNRPD1	97	99.130	Sphenodon_punctatus
ENSCAPG00000008103	SNRPD1	97	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSCAPG00000008103	SNRPD1	99	99.130	ENSTGUG00000005095	SNRPD1	97	99.130	Taeniopygia_guttata
ENSCAPG00000008103	SNRPD1	97	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSCAPG00000008103	SNRPD1	83	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSCAPG00000008103	SNRPD1	76	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSCAPG00000008103	SNRPD1	99	99.130	ENSTTRG00000002654	SNRPD1	100	99.130	Tursiops_truncatus
ENSCAPG00000008103	SNRPD1	98	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSUMAG00000019740	SNRPD1	97	99.130	Ursus_maritimus
ENSCAPG00000008103	SNRPD1	99	99.130	ENSVPAG00000010056	SNRPD1	77	99.130	Vicugna_pacos
ENSCAPG00000008103	SNRPD1	97	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSCAPG00000008103	SNRPD1	99	97.391	ENSXETG00000027354	snrpd1	97	97.391	Xenopus_tropicalis
ENSCAPG00000008103	SNRPD1	93	95.370	ENSXCOG00000020108	snrpd1	91	95.370	Xiphophorus_couchianus
ENSCAPG00000008103	SNRPD1	93	95.370	ENSXMAG00000003368	snrpd1	91	95.370	Xiphophorus_maculatus