EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008253 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: YJR022W
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2346 bases
Position: chrAVPZ01000023.1:39519086-39521431
Accession: 20471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006055	LSM	PF01423.22	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000009670	LSM8-201	225	-	ENSCAPP00000006055	74 (aa)	-	UPI00085B0FEF

Gene Model

Click here to download ENSCAPG00000008253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008253	LSM8	100	98.649	ENSG00000128534	LSM8	99	98.649	Homo_sapiens
ENSCAPG00000008253	LSM8	100	95.946	ENSAPOG00000008649	lsm8	77	95.946	Acanthochromis_polyacanthus
ENSCAPG00000008253	LSM8	100	98.649	ENSAMEG00000001162	LSM8	77	98.649	Ailuropoda_melanoleuca
ENSCAPG00000008253	LSM8	100	95.946	ENSACIG00000014694	lsm8	99	95.946	Amphilophus_citrinellus
ENSCAPG00000008253	LSM8	100	95.946	ENSAOCG00000013926	lsm8	77	95.946	Amphiprion_ocellaris
ENSCAPG00000008253	LSM8	100	95.946	ENSAPEG00000023502	lsm8	77	95.946	Amphiprion_percula
ENSCAPG00000008253	LSM8	100	95.946	ENSATEG00000023432	lsm8	99	95.946	Anabas_testudineus
ENSCAPG00000008253	LSM8	100	97.297	ENSAPLG00000005115	LSM8	75	97.297	Anas_platyrhynchos
ENSCAPG00000008253	LSM8	100	98.649	ENSANAG00000027771	LSM8	100	98.649	Aotus_nancymaae
ENSCAPG00000008253	LSM8	100	95.946	ENSACLG00000011253	lsm8	77	95.946	Astatotilapia_calliptera
ENSCAPG00000008253	LSM8	100	97.297	ENSAMXG00000042902	lsm8	77	97.297	Astyanax_mexicanus
ENSCAPG00000008253	LSM8	100	98.649	ENSBTAG00000012649	LSM8	77	98.649	Bos_taurus
ENSCAPG00000008253	LSM8	97	56.944	WBGene00003082	lsm-8	73	56.944	Caenorhabditis_elegans
ENSCAPG00000008253	LSM8	100	98.649	ENSCJAG00000046406	LSM8	100	98.649	Callithrix_jacchus
ENSCAPG00000008253	LSM8	99	98.630	ENSCAFG00000016459	LSM8	74	98.630	Canis_familiaris
ENSCAPG00000008253	LSM8	100	83.784	ENSCAFG00020012800	-	58	83.784	Canis_lupus_dingo
ENSCAPG00000008253	LSM8	100	98.649	ENSCAFG00020007643	-	77	98.649	Canis_lupus_dingo
ENSCAPG00000008253	LSM8	100	98.649	ENSCHIG00000014201	LSM8	79	98.649	Capra_hircus
ENSCAPG00000008253	LSM8	100	98.649	ENSTSYG00000032434	LSM8	77	98.649	Carlito_syrichta
ENSCAPG00000008253	LSM8	100	98.649	ENSCPOG00000035673	LSM8	77	98.649	Cavia_porcellus
ENSCAPG00000008253	LSM8	100	98.649	ENSCCAG00000021329	LSM8	100	98.649	Cebus_capucinus
ENSCAPG00000008253	LSM8	100	98.649	ENSCATG00000045302	LSM8	100	98.649	Cercocebus_atys
ENSCAPG00000008253	LSM8	100	98.649	ENSCLAG00000003726	LSM8	77	98.649	Chinchilla_lanigera
ENSCAPG00000008253	LSM8	100	98.649	ENSCSAG00000010802	-	77	98.649	Chlorocebus_sabaeus
ENSCAPG00000008253	LSM8	100	95.946	ENSCSAG00000019007	-	77	95.946	Chlorocebus_sabaeus
ENSCAPG00000008253	LSM8	100	98.649	ENSCPBG00000008154	LSM8	76	98.649	Chrysemys_picta_bellii
ENSCAPG00000008253	LSM8	100	78.378	ENSCING00000024877	-	77	78.378	Ciona_intestinalis
ENSCAPG00000008253	LSM8	100	98.649	ENSCANG00000040728	LSM8	100	98.649	Colobus_angolensis_palliatus
ENSCAPG00000008253	LSM8	100	98.649	ENSCGRG00001000450	Lsm8	77	98.649	Cricetulus_griseus_chok1gshd
ENSCAPG00000008253	LSM8	100	98.649	ENSCGRG00000005587	Lsm8	87	98.649	Cricetulus_griseus_crigri
ENSCAPG00000008253	LSM8	97	95.833	ENSCSEG00000004164	lsm8	79	95.833	Cynoglossus_semilaevis
ENSCAPG00000008253	LSM8	100	94.595	ENSCVAG00000020547	lsm8	77	94.595	Cyprinodon_variegatus
ENSCAPG00000008253	LSM8	100	95.946	ENSDARG00000091656	lsm8	77	95.946	Danio_rerio
ENSCAPG00000008253	LSM8	100	98.649	ENSDNOG00000034613	LSM8	77	98.649	Dasypus_novemcinctus
ENSCAPG00000008253	LSM8	100	98.649	ENSDORG00000027868	Lsm8	77	98.649	Dipodomys_ordii
ENSCAPG00000008253	LSM8	100	70.270	FBgn0035271	CG2021	78	70.270	Drosophila_melanogaster
ENSCAPG00000008253	LSM8	100	97.297	ENSETEG00000011594	LSM8	77	97.297	Echinops_telfairi
ENSCAPG00000008253	LSM8	100	93.243	ENSEBUG00000012017	lsm8	100	93.243	Eptatretus_burgeri
ENSCAPG00000008253	LSM8	100	98.649	ENSECAG00000024025	LSM8	71	100.000	Equus_caballus
ENSCAPG00000008253	LSM8	100	93.243	ENSELUG00000010138	lsm8	77	93.243	Esox_lucius
ENSCAPG00000008253	LSM8	100	98.649	ENSFCAG00000036620	-	77	98.649	Felis_catus
ENSCAPG00000008253	LSM8	89	71.212	ENSFCAG00000044794	-	65	71.212	Felis_catus
ENSCAPG00000008253	LSM8	100	97.297	ENSFALG00000010023	LSM8	77	97.297	Ficedula_albicollis
ENSCAPG00000008253	LSM8	100	98.649	ENSFDAG00000019530	LSM8	77	98.649	Fukomys_damarensis
ENSCAPG00000008253	LSM8	100	95.946	ENSFHEG00000013729	lsm8	77	95.946	Fundulus_heteroclitus
ENSCAPG00000008253	LSM8	100	97.297	ENSGALG00000009110	LSM8	77	97.297	Gallus_gallus
ENSCAPG00000008253	LSM8	100	94.595	ENSGAFG00000001135	lsm8	77	94.595	Gambusia_affinis
ENSCAPG00000008253	LSM8	100	98.649	ENSGAGG00000017366	LSM8	77	98.649	Gopherus_agassizii
ENSCAPG00000008253	LSM8	100	98.649	ENSGGOG00000041883	LSM8	77	98.649	Gorilla_gorilla
ENSCAPG00000008253	LSM8	100	95.946	ENSHBUG00000003646	lsm8	77	95.946	Haplochromis_burtoni
ENSCAPG00000008253	LSM8	100	91.892	ENSHGLG00000019782	-	77	91.892	Heterocephalus_glaber_female
ENSCAPG00000008253	LSM8	62	97.826	ENSHGLG00000001988	-	67	97.826	Heterocephalus_glaber_female
ENSCAPG00000008253	LSM8	100	93.243	ENSHGLG00100012166	-	77	93.243	Heterocephalus_glaber_male
ENSCAPG00000008253	LSM8	99	94.521	ENSHGLG00100003934	-	73	94.521	Heterocephalus_glaber_male
ENSCAPG00000008253	LSM8	100	94.595	ENSHCOG00000005037	lsm8	77	94.595	Hippocampus_comes
ENSCAPG00000008253	LSM8	100	97.297	ENSIPUG00000019811	NAA38	77	97.297	Ictalurus_punctatus
ENSCAPG00000008253	LSM8	100	98.649	ENSSTOG00000009039	LSM8	80	97.297	Ictidomys_tridecemlineatus
ENSCAPG00000008253	LSM8	100	85.135	ENSSTOG00000034801	-	69	85.135	Ictidomys_tridecemlineatus
ENSCAPG00000008253	LSM8	100	98.649	ENSJJAG00000009031	Lsm8	76	98.649	Jaculus_jaculus
ENSCAPG00000008253	LSM8	100	95.946	ENSKMAG00000018983	lsm8	77	95.946	Kryptolebias_marmoratus
ENSCAPG00000008253	LSM8	100	94.595	ENSLACG00000010231	LSM8	77	94.595	Latimeria_chalumnae
ENSCAPG00000008253	LSM8	100	95.946	ENSLOCG00000015580	lsm8	77	95.946	Lepisosteus_oculatus
ENSCAPG00000008253	LSM8	100	98.649	ENSLAFG00000011242	LSM8	76	98.649	Loxodonta_africana
ENSCAPG00000008253	LSM8	100	94.595	ENSMFAG00000013044	-	77	94.595	Macaca_fascicularis
ENSCAPG00000008253	LSM8	100	98.649	ENSMFAG00000035798	LSM8	100	98.649	Macaca_fascicularis
ENSCAPG00000008253	LSM8	100	98.649	ENSMMUG00000046401	LSM8	100	98.649	Macaca_mulatta
ENSCAPG00000008253	LSM8	100	98.649	ENSMNEG00000036764	-	100	98.649	Macaca_nemestrina
ENSCAPG00000008253	LSM8	100	94.595	ENSMNEG00000011141	-	99	94.595	Macaca_nemestrina
ENSCAPG00000008253	LSM8	100	81.081	ENSMLEG00000039324	-	75	81.081	Mandrillus_leucophaeus
ENSCAPG00000008253	LSM8	100	98.649	ENSMLEG00000035828	-	100	98.649	Mandrillus_leucophaeus
ENSCAPG00000008253	LSM8	100	95.946	ENSMAMG00000018839	lsm8	99	95.946	Mastacembelus_armatus
ENSCAPG00000008253	LSM8	100	95.946	ENSMZEG00005019138	lsm8	77	95.946	Maylandia_zebra
ENSCAPG00000008253	LSM8	100	97.297	ENSMGAG00000008808	LSM8	77	97.297	Meleagris_gallopavo
ENSCAPG00000008253	LSM8	100	89.189	ENSMAUG00000015721	-	77	89.189	Mesocricetus_auratus
ENSCAPG00000008253	LSM8	100	91.892	ENSMAUG00000020287	-	100	91.892	Mesocricetus_auratus
ENSCAPG00000008253	LSM8	100	77.027	ENSMAUG00000015356	-	74	77.027	Mesocricetus_auratus
ENSCAPG00000008253	LSM8	100	98.649	ENSMICG00000042730	LSM8	77	98.649	Microcebus_murinus
ENSCAPG00000008253	LSM8	100	98.649	ENSMOCG00000001688	Lsm8	77	98.649	Microtus_ochrogaster
ENSCAPG00000008253	LSM8	100	95.946	ENSMMOG00000006046	lsm8	99	95.946	Mola_mola
ENSCAPG00000008253	LSM8	97	85.135	ENSMODG00000015729	LSM8	95	85.135	Monodelphis_domestica
ENSCAPG00000008253	LSM8	100	95.946	ENSMALG00000000405	lsm8	77	95.946	Monopterus_albus
ENSCAPG00000008253	LSM8	100	98.649	MGP_CAROLIEiJ_G0028125	-	77	98.649	Mus_caroli
ENSCAPG00000008253	LSM8	100	98.649	ENSMUSG00000044155	Lsm8	77	98.649	Mus_musculus
ENSCAPG00000008253	LSM8	100	98.649	MGP_PahariEiJ_G0021881	Lsm8	99	98.649	Mus_pahari
ENSCAPG00000008253	LSM8	100	98.649	MGP_SPRETEiJ_G0029125	-	77	98.649	Mus_spretus
ENSCAPG00000008253	LSM8	100	97.297	ENSMLUG00000027762	-	77	97.297	Myotis_lucifugus
ENSCAPG00000008253	LSM8	100	98.649	ENSMLUG00000006837	-	77	98.649	Myotis_lucifugus
ENSCAPG00000008253	LSM8	100	98.649	ENSNGAG00000016554	Lsm8	77	98.649	Nannospalax_galili
ENSCAPG00000008253	LSM8	100	95.946	ENSNBRG00000014441	lsm8	77	95.946	Neolamprologus_brichardi
ENSCAPG00000008253	LSM8	100	98.649	ENSNLEG00000011768	LSM8	77	98.649	Nomascus_leucogenys
ENSCAPG00000008253	LSM8	100	85.135	ENSMEUG00000007801	LSM8	77	85.135	Notamacropus_eugenii
ENSCAPG00000008253	LSM8	100	98.649	ENSOPRG00000014809	LSM8	87	98.649	Ochotona_princeps
ENSCAPG00000008253	LSM8	86	81.250	ENSODEG00000020290	-	74	81.250	Octodon_degus
ENSCAPG00000008253	LSM8	100	98.649	ENSODEG00000000418	-	77	98.649	Octodon_degus
ENSCAPG00000008253	LSM8	100	98.649	ENSOANG00000014536	LSM8	77	98.649	Ornithorhynchus_anatinus
ENSCAPG00000008253	LSM8	100	98.649	ENSOCUG00000017359	LSM8	76	98.649	Oryctolagus_cuniculus
ENSCAPG00000008253	LSM8	97	97.222	ENSORLG00000017432	lsm8	77	97.222	Oryzias_latipes
ENSCAPG00000008253	LSM8	97	97.222	ENSORLG00020004376	lsm8	77	97.222	Oryzias_latipes_hni
ENSCAPG00000008253	LSM8	100	95.946	ENSORLG00015003757	lsm8	77	95.946	Oryzias_latipes_hsok
ENSCAPG00000008253	LSM8	93	97.101	ENSOMEG00000022509	lsm8	82	94.595	Oryzias_melastigma
ENSCAPG00000008253	LSM8	100	98.649	ENSOGAG00000013377	LSM8	77	98.649	Otolemur_garnettii
ENSCAPG00000008253	LSM8	100	98.649	ENSOARG00000017974	LSM8	77	98.649	Ovis_aries
ENSCAPG00000008253	LSM8	100	98.649	ENSPPAG00000043228	-	99	98.649	Pan_paniscus
ENSCAPG00000008253	LSM8	100	98.649	ENSPPRG00000006444	LSM8	77	98.649	Panthera_pardus
ENSCAPG00000008253	LSM8	100	98.649	ENSPTIG00000004722	LSM8	77	98.649	Panthera_tigris_altaica
ENSCAPG00000008253	LSM8	100	98.649	ENSPTRG00000046596	-	99	98.649	Pan_troglodytes
ENSCAPG00000008253	LSM8	100	98.649	ENSPANG00000035470	-	100	98.649	Papio_anubis
ENSCAPG00000008253	LSM8	100	93.243	ENSPANG00000019395	-	77	93.243	Papio_anubis
ENSCAPG00000008253	LSM8	100	95.946	ENSPKIG00000006092	lsm8	75	95.946	Paramormyrops_kingsleyae
ENSCAPG00000008253	LSM8	100	98.649	ENSPSIG00000017054	LSM8	99	98.649	Pelodiscus_sinensis
ENSCAPG00000008253	LSM8	100	95.946	ENSPMGG00000016442	lsm8	99	95.946	Periophthalmus_magnuspinnatus
ENSCAPG00000008253	LSM8	100	97.297	ENSPEMG00000009153	Lsm8	100	97.297	Peromyscus_maniculatus_bairdii
ENSCAPG00000008253	LSM8	96	98.592	ENSPCIG00000021467	LSM8	75	98.592	Phascolarctos_cinereus
ENSCAPG00000008253	LSM8	100	94.595	ENSPFOG00000012340	lsm8	77	94.595	Poecilia_formosa
ENSCAPG00000008253	LSM8	100	94.595	ENSPLAG00000000516	lsm8	77	94.595	Poecilia_latipinna
ENSCAPG00000008253	LSM8	100	94.595	ENSPMEG00000022567	lsm8	77	94.595	Poecilia_mexicana
ENSCAPG00000008253	LSM8	99	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSCAPG00000008253	LSM8	100	98.649	ENSPPYG00000017942	LSM8	77	98.649	Pongo_abelii
ENSCAPG00000008253	LSM8	100	98.649	ENSPCOG00000003309	-	77	98.649	Propithecus_coquereli
ENSCAPG00000008253	LSM8	99	73.973	ENSPCOG00000017982	-	73	73.973	Propithecus_coquereli
ENSCAPG00000008253	LSM8	100	97.297	ENSPVAG00000000990	LSM8	87	97.297	Pteropus_vampyrus
ENSCAPG00000008253	LSM8	100	95.946	ENSPNYG00000011448	lsm8	77	95.946	Pundamilia_nyererei
ENSCAPG00000008253	LSM8	100	97.297	ENSPNAG00000010252	lsm8	77	97.297	Pygocentrus_nattereri
ENSCAPG00000008253	LSM8	100	98.649	ENSRNOG00000058677	Lsm8	77	98.649	Rattus_norvegicus
ENSCAPG00000008253	LSM8	100	98.649	ENSRBIG00000032851	LSM8	100	98.649	Rhinopithecus_bieti
ENSCAPG00000008253	LSM8	100	98.649	ENSRROG00000039618	LSM8	100	98.649	Rhinopithecus_roxellana
ENSCAPG00000008253	LSM8	100	98.649	ENSSBOG00000023223	LSM8	100	98.649	Saimiri_boliviensis_boliviensis
ENSCAPG00000008253	LSM8	100	98.649	ENSSHAG00000018435	-	77	98.649	Sarcophilus_harrisii
ENSCAPG00000008253	LSM8	100	94.595	ENSSFOG00015004412	lsm8	77	94.595	Scleropages_formosus
ENSCAPG00000008253	LSM8	100	95.946	ENSSMAG00000009458	lsm8	99	95.946	Scophthalmus_maximus
ENSCAPG00000008253	LSM8	100	95.946	ENSSDUG00000014702	lsm8	77	95.946	Seriola_dumerili
ENSCAPG00000008253	LSM8	100	95.946	ENSSLDG00000016870	lsm8	99	95.946	Seriola_lalandi_dorsalis
ENSCAPG00000008253	LSM8	97	100.000	ENSSARG00000009628	-	100	100.000	Sorex_araneus
ENSCAPG00000008253	LSM8	100	98.649	ENSSPUG00000017419	LSM8	77	98.649	Sphenodon_punctatus
ENSCAPG00000008253	LSM8	100	95.946	ENSSPAG00000021422	lsm8	77	95.946	Stegastes_partitus
ENSCAPG00000008253	LSM8	100	98.649	ENSSSCG00000021652	LSM8	77	98.649	Sus_scrofa
ENSCAPG00000008253	LSM8	100	97.297	ENSTGUG00000004730	-	77	97.297	Taeniopygia_guttata
ENSCAPG00000008253	LSM8	100	95.946	ENSTGUG00000016823	-	77	95.946	Taeniopygia_guttata
ENSCAPG00000008253	LSM8	100	95.946	ENSTRUG00000025192	lsm8	77	95.946	Takifugu_rubripes
ENSCAPG00000008253	LSM8	100	95.946	ENSTNIG00000002864	lsm8	77	95.946	Tetraodon_nigroviridis
ENSCAPG00000008253	LSM8	100	98.649	ENSTTRG00000001023	LSM8	77	98.649	Tursiops_truncatus
ENSCAPG00000008253	LSM8	100	98.649	ENSUAMG00000006943	-	77	98.649	Ursus_americanus
ENSCAPG00000008253	LSM8	100	98.649	ENSUMAG00000003073	LSM8	79	98.649	Ursus_maritimus
ENSCAPG00000008253	LSM8	100	98.649	ENSVPAG00000001530	LSM8	77	98.649	Vicugna_pacos
ENSCAPG00000008253	LSM8	100	95.946	ENSVVUG00000013248	-	81	95.946	Vulpes_vulpes
ENSCAPG00000008253	LSM8	100	95.946	ENSXETG00000021829	lsm8	76	95.946	Xenopus_tropicalis
ENSCAPG00000008253	LSM8	100	93.243	ENSXCOG00000012938	lsm8	78	93.243	Xiphophorus_couchianus
ENSCAPG00000008253	LSM8	100	94.595	ENSXMAG00000025919	lsm8	77	94.595	Xiphophorus_maculatus