EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008576 (Gene tree)
Gene ID: -
Gene Symbol: RRP1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 7443 bases
Position: chrAVPZ01000900.1:599137-606579
Accession: 18785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006398	Nop52	PF05997.12	2.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010078	RRP1-201	1203	-	ENSCAPP00000006398	400 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008576	RRP1	83	70.695	ENSG00000160214	RRP1	66	70.606	Homo_sapiens
ENSCAPG00000008576	RRP1	89	66.573	ENSAMEG00000011448	RRP1	72	66.017	Ailuropoda_melanoleuca
ENSCAPG00000008576	RRP1	76	48.052	ENSACIG00000019121	rrp1	56	47.557	Amphilophus_citrinellus
ENSCAPG00000008576	RRP1	81	45.652	ENSAOCG00000017894	-	65	44.817	Amphiprion_ocellaris
ENSCAPG00000008576	RRP1	80	68.025	ENSANAG00000037815	RRP1	66	69.279	Aotus_nancymaae
ENSCAPG00000008576	RRP1	85	63.422	ENSBTAG00000003981	RRP1	71	63.303	Bos_taurus
ENSCAPG00000008576	RRP1	88	68.079	ENSCJAG00000043205	RRP1	62	70.303	Callithrix_jacchus
ENSCAPG00000008576	RRP1	89	67.318	ENSCAFG00000010646	RRP1	87	60.533	Canis_familiaris
ENSCAPG00000008576	RRP1	89	67.318	ENSCAFG00020018979	RRP1	82	62.312	Canis_lupus_dingo
ENSCAPG00000008576	RRP1	95	59.640	ENSTSYG00000012831	RRP1	83	57.590	Carlito_syrichta
ENSCAPG00000008576	RRP1	88	90.028	ENSCPOG00000038986	RRP1	72	90.028	Cavia_porcellus
ENSCAPG00000008576	RRP1	99	63.814	ENSCCAG00000029828	RRP1	83	62.592	Cebus_capucinus
ENSCAPG00000008576	RRP1	83	69.486	ENSCATG00000015632	RRP1	85	60.432	Cercocebus_atys
ENSCAPG00000008576	RRP1	88	76.989	ENSCLAG00000011639	RRP1	72	75.284	Chinchilla_lanigera
ENSCAPG00000008576	RRP1	77	68.627	ENSCSAG00000007936	RRP1	85	68.301	Chlorocebus_sabaeus
ENSCAPG00000008576	RRP1	58	40.385	ENSCING00000003304	-	59	40.385	Ciona_intestinalis
ENSCAPG00000008576	RRP1	99	61.168	ENSCANG00000042611	RRP1	82	61.421	Colobus_angolensis_palliatus
ENSCAPG00000008576	RRP1	84	66.866	ENSCGRG00001011920	Rrp1	69	66.163	Cricetulus_griseus_chok1gshd
ENSCAPG00000008576	RRP1	84	66.866	ENSCGRG00000008915	Rrp1	69	66.163	Cricetulus_griseus_crigri
ENSCAPG00000008576	RRP1	85	42.899	ENSCSEG00000020711	-	56	44.578	Cynoglossus_semilaevis
ENSCAPG00000008576	RRP1	81	42.593	ENSCVAG00000017568	-	75	41.463	Cyprinodon_variegatus
ENSCAPG00000008576	RRP1	94	61.842	ENSDNOG00000019880	RRP1	76	61.053	Dasypus_novemcinctus
ENSCAPG00000008576	RRP1	83	67.069	ENSDORG00000002104	Rrp1	75	66.970	Dipodomys_ordii
ENSCAPG00000008576	RRP1	76	52.459	ENSETEG00000002963	-	61	51.282	Echinops_telfairi
ENSCAPG00000008576	RRP1	89	67.232	ENSEASG00005001673	RRP1	68	68.293	Equus_asinus_asinus
ENSCAPG00000008576	RRP1	97	57.868	ENSECAG00000015703	RRP1	68	68.598	Equus_caballus
ENSCAPG00000008576	RRP1	84	44.575	ENSELUG00000015885	-	84	42.982	Esox_lucius
ENSCAPG00000008576	RRP1	98	61.026	ENSFCAG00000008434	RRP1	79	61.893	Felis_catus
ENSCAPG00000008576	RRP1	92	70.889	ENSFDAG00000013728	RRP1	76	70.350	Fukomys_damarensis
ENSCAPG00000008576	RRP1	83	71.601	ENSGGOG00000000173	RRP1	66	71.515	Gorilla_gorilla
ENSCAPG00000008576	RRP1	89	74.648	ENSHGLG00000017085	RRP1	69	74.576	Heterocephalus_glaber_female
ENSCAPG00000008576	RRP1	80	42.500	ENSIPUG00000000673	-	59	43.210	Ictalurus_punctatus
ENSCAPG00000008576	RRP1	89	68.169	ENSSTOG00000011116	RRP1	74	67.324	Ictidomys_tridecemlineatus
ENSCAPG00000008576	RRP1	98	60.406	ENSJJAG00000018886	Rrp1	78	81.500	Jaculus_jaculus
ENSCAPG00000008576	RRP1	81	42.284	ENSLBEG00000021417	RRP1	78	40.828	Labrus_bergylta
ENSCAPG00000008576	RRP1	86	48.105	ENSLAFG00000000766	RRP1B	70	50.155	Loxodonta_africana
ENSCAPG00000008576	RRP1	96	59.536	ENSLAFG00000022901	RRP1	81	56.691	Loxodonta_africana
ENSCAPG00000008576	RRP1	83	70.091	ENSMFAG00000003202	RRP1	66	70.000	Macaca_fascicularis
ENSCAPG00000008576	RRP1	83	69.184	ENSMMUG00000012304	RRP1	66	69.394	Macaca_mulatta
ENSCAPG00000008576	RRP1	83	68.580	ENSMNEG00000031210	RRP1	66	69.091	Macaca_nemestrina
ENSCAPG00000008576	RRP1	83	70.393	ENSMLEG00000037797	RRP1	72	70.303	Mandrillus_leucophaeus
ENSCAPG00000008576	RRP1	83	55.287	ENSMAUG00000017653	Rrp1	65	53.636	Mesocricetus_auratus
ENSCAPG00000008576	RRP1	98	62.341	ENSMICG00000004700	RRP1	83	62.087	Microcebus_murinus
ENSCAPG00000008576	RRP1	83	61.299	ENSMOCG00000015687	Rrp1	72	63.429	Microtus_ochrogaster
ENSCAPG00000008576	RRP1	81	41.284	ENSMMOG00000019175	rrp1	75	39.222	Mola_mola
ENSCAPG00000008576	RRP1	81	46.605	ENSMALG00000010310	rrp1	77	45.370	Monopterus_albus
ENSCAPG00000008576	RRP1	92	55.582	MGP_CAROLIEiJ_G0015508	Rrp1	82	56.543	Mus_caroli
ENSCAPG00000008576	RRP1	92	54.762	ENSMUSG00000061032	Rrp1	81	56.068	Mus_musculus
ENSCAPG00000008576	RRP1	80	77.143	MGP_PahariEiJ_G0030921	Rrp1	82	57.284	Mus_pahari
ENSCAPG00000008576	RRP1	97	53.394	MGP_SPRETEiJ_G0016321	Rrp1	85	55.687	Mus_spretus
ENSCAPG00000008576	RRP1	89	63.660	ENSMPUG00000009826	RRP1	85	59.427	Mustela_putorius_furo
ENSCAPG00000008576	RRP1	88	60.000	ENSMLUG00000017788	RRP1	75	60.614	Myotis_lucifugus
ENSCAPG00000008576	RRP1	83	51.821	ENSNGAG00000022344	Rrp1	72	50.282	Nannospalax_galili
ENSCAPG00000008576	RRP1	83	70.997	ENSNLEG00000034734	RRP1	82	62.687	Nomascus_leucogenys
ENSCAPG00000008576	RRP1	67	73.370	ENSOPRG00000001319	RRP1	82	58.859	Ochotona_princeps
ENSCAPG00000008576	RRP1	79	54.114	ENSOANG00000006472	-	88	50.000	Ornithorhynchus_anatinus
ENSCAPG00000008576	RRP1	73	58.642	ENSOCUG00000022843	-	83	57.849	Oryctolagus_cuniculus
ENSCAPG00000008576	RRP1	87	66.011	ENSOGAG00000006105	RRP1	83	60.644	Otolemur_garnettii
ENSCAPG00000008576	RRP1	83	70.997	ENSPPAG00000029050	RRP1	66	70.909	Pan_paniscus
ENSCAPG00000008576	RRP1	85	67.353	ENSPPRG00000010656	RRP1	67	67.976	Panthera_pardus
ENSCAPG00000008576	RRP1	90	58.402	ENSPTIG00000019473	RRP1	76	58.516	Panthera_tigris_altaica
ENSCAPG00000008576	RRP1	83	70.695	ENSPTRG00000013962	RRP1	66	70.606	Pan_troglodytes
ENSCAPG00000008576	RRP1	85	68.732	ENSPANG00000015097	RRP1	85	60.817	Papio_anubis
ENSCAPG00000008576	RRP1	81	35.030	ENSPMGG00000007512	-	73	35.030	Periophthalmus_magnuspinnatus
ENSCAPG00000008576	RRP1	83	68.882	ENSPEMG00000018421	Rrp1	88	59.806	Peromyscus_maniculatus_bairdii
ENSCAPG00000008576	RRP1	84	54.762	ENSPCIG00000015523	-	65	56.037	Phascolarctos_cinereus
ENSCAPG00000008576	RRP1	83	69.486	ENSPPYG00000011474	RRP1	66	69.394	Pongo_abelii
ENSCAPG00000008576	RRP1	83	68.750	ENSPCOG00000017706	RRP1	83	62.594	Propithecus_coquereli
ENSCAPG00000008576	RRP1	66	49.711	ENSPVAG00000009925	-	50	49.080	Pteropus_vampyrus
ENSCAPG00000008576	RRP1	83	68.580	ENSRBIG00000032082	RRP1	82	62.531	Rhinopithecus_bieti
ENSCAPG00000008576	RRP1	83	68.580	ENSRROG00000039799	RRP1	85	59.712	Rhinopithecus_roxellana
ENSCAPG00000008576	RRP1	88	66.384	ENSSBOG00000034689	RRP1	66	68.485	Saimiri_boliviensis_boliviensis
ENSCAPG00000008576	RRP1	88	52.557	ENSSHAG00000010304	-	91	56.347	Sarcophilus_harrisii
ENSCAPG00000008576	RRP1	80	44.548	ENSSFOG00015003932	-	57	40.458	Scleropages_formosus
ENSCAPG00000008576	RRP1	81	44.543	ENSSMAG00000016847	-	70	45.603	Scophthalmus_maximus
ENSCAPG00000008576	RRP1	90	64.167	ENSSSCG00000037061	RRP1	67	66.667	Sus_scrofa
ENSCAPG00000008576	RRP1	81	45.062	ENSTRUG00000017592	rrp1	85	44.753	Takifugu_rubripes
ENSCAPG00000008576	RRP1	89	45.856	ENSTBEG00000000422	RRP1B	52	47.531	Tupaia_belangeri
ENSCAPG00000008576	RRP1	63	66.883	ENSTTRG00000011162	RRP1	53	66.883	Tursiops_truncatus
ENSCAPG00000008576	RRP1	71	61.268	ENSUAMG00000014189	-	76	59.790	Ursus_americanus
ENSCAPG00000008576	RRP1	85	46.802	ENSUMAG00000025510	RRP1B	56	48.243	Ursus_maritimus
ENSCAPG00000008576	RRP1	89	66.761	ENSUMAG00000025507	RRP1	80	64.535	Ursus_maritimus
ENSCAPG00000008576	RRP1	67	60.075	ENSVVUG00000024498	-	69	56.954	Vulpes_vulpes