EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008696 (Gene tree)
Gene ID: -
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 72060 bases
Position: chrAVPZ01000222.1:6669525-6741584
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006581	rRNA_proc-arch	PF13234.6	3.3e-61	1	1
ENSCAPP00000006585	rRNA_proc-arch	PF13234.6	3.3e-61	1	1
ENSCAPP00000006585	DEAD	PF00270.29	7.2e-09	1	1
ENSCAPP00000006581	DEAD	PF00270.29	8.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010263	MTREX-201	2508	-	ENSCAPP00000006581	835 (aa)	-	-
ENSCAPT00000010267	MTREX-202	2529	-	ENSCAPP00000006585	842 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008696	MTREX	100	73.848	ENSG00000039123	MTREX	85	100.000	Homo_sapiens
ENSCAPG00000008696	MTREX	96	75.799	ENSAPOG00000007814	mtrex	87	76.027	Acanthochromis_polyacanthus
ENSCAPG00000008696	MTREX	100	73.574	ENSAMEG00000013856	MTREX	96	73.574	Ailuropoda_melanoleuca
ENSCAPG00000008696	MTREX	91	75.917	ENSACIG00000015117	mtrex	87	76.147	Amphilophus_citrinellus
ENSCAPG00000008696	MTREX	92	76.027	ENSAOCG00000011884	mtrex	86	76.256	Amphiprion_ocellaris
ENSCAPG00000008696	MTREX	93	75.799	ENSAPEG00000019384	mtrex	87	76.027	Amphiprion_percula
ENSCAPG00000008696	MTREX	95	77.397	ENSATEG00000015117	mtrex	88	77.397	Anabas_testudineus
ENSCAPG00000008696	MTREX	89	84.318	ENSAPLG00000009694	MTREX	84	84.318	Anas_platyrhynchos
ENSCAPG00000008696	MTREX	100	68.537	ENSACAG00000015200	MTREX	93	68.537	Anolis_carolinensis
ENSCAPG00000008696	MTREX	100	74.048	ENSANAG00000023095	MTREX	98	74.048	Aotus_nancymaae
ENSCAPG00000008696	MTREX	95	75.342	ENSACLG00000001921	mtrex	86	75.571	Astatotilapia_calliptera
ENSCAPG00000008696	MTREX	93	62.842	ENSAMXG00000018751	mtrex	95	62.959	Astyanax_mexicanus
ENSCAPG00000008696	MTREX	99	73.769	ENSBTAG00000010518	MTREX	96	73.769	Bos_taurus
ENSCAPG00000008696	MTREX	94	40.190	WBGene00012342	mtr-4	99	37.793	Caenorhabditis_elegans
ENSCAPG00000008696	MTREX	100	74.048	ENSCJAG00000001773	MTREX	97	74.048	Callithrix_jacchus
ENSCAPG00000008696	MTREX	100	73.647	ENSCAFG00000006818	MTREX	96	73.647	Canis_familiaris
ENSCAPG00000008696	MTREX	100	73.647	ENSCAFG00020024352	MTREX	96	73.647	Canis_lupus_dingo
ENSCAPG00000008696	MTREX	99	73.769	ENSCHIG00000024413	MTREX	95	73.769	Capra_hircus
ENSCAPG00000008696	MTREX	97	74.595	ENSTSYG00000007389	MTREX	95	74.595	Carlito_syrichta
ENSCAPG00000008696	MTREX	100	74.649	ENSCPOG00000009797	MTREX	96	74.649	Cavia_porcellus
ENSCAPG00000008696	MTREX	100	73.948	ENSCCAG00000014177	MTREX	96	73.948	Cebus_capucinus
ENSCAPG00000008696	MTREX	100	73.848	ENSCATG00000042153	MTREX	96	73.848	Cercocebus_atys
ENSCAPG00000008696	MTREX	100	74.248	ENSCLAG00000006622	MTREX	96	74.248	Chinchilla_lanigera
ENSCAPG00000008696	MTREX	100	69.552	ENSCSAG00000016445	MTREX	96	69.552	Chlorocebus_sabaeus
ENSCAPG00000008696	MTREX	67	100.000	ENSCHOG00000010936	-	61	98.611	Choloepus_hoffmanni
ENSCAPG00000008696	MTREX	99	69.539	ENSCPBG00000026551	MTREX	90	69.570	Chrysemys_picta_bellii
ENSCAPG00000008696	MTREX	93	57.451	ENSCING00000003239	-	90	58.278	Ciona_intestinalis
ENSCAPG00000008696	MTREX	82	89.697	ENSCSAVG00000009304	-	76	89.697	Ciona_savignyi
ENSCAPG00000008696	MTREX	100	73.848	ENSCANG00000035770	MTREX	96	73.848	Colobus_angolensis_palliatus
ENSCAPG00000008696	MTREX	100	72.946	ENSCGRG00001024680	Mtrex	96	72.946	Cricetulus_griseus_chok1gshd
ENSCAPG00000008696	MTREX	100	72.946	ENSCGRG00000000307	Mtrex	96	72.946	Cricetulus_griseus_crigri
ENSCAPG00000008696	MTREX	92	74.091	ENSCSEG00000018621	mtrex	85	74.091	Cynoglossus_semilaevis
ENSCAPG00000008696	MTREX	91	76.712	ENSCVAG00000004556	mtrex	86	76.712	Cyprinodon_variegatus
ENSCAPG00000008696	MTREX	99	63.798	ENSDARG00000013457	mtrex	98	63.798	Danio_rerio
ENSCAPG00000008696	MTREX	100	73.146	ENSDNOG00000015375	MTREX	95	73.146	Dasypus_novemcinctus
ENSCAPG00000008696	MTREX	100	73.347	ENSDORG00000006782	Mtrex	96	73.347	Dipodomys_ordii
ENSCAPG00000008696	MTREX	92	55.581	FBgn0001986	Mtr4	84	54.545	Drosophila_melanogaster
ENSCAPG00000008696	MTREX	77	100.000	ENSETEG00000000727	MTREX	69	100.000	Echinops_telfairi
ENSCAPG00000008696	MTREX	97	59.236	ENSEBUG00000012869	mtrex	89	59.236	Eptatretus_burgeri
ENSCAPG00000008696	MTREX	100	73.246	ENSEASG00005013270	MTREX	96	73.246	Equus_asinus_asinus
ENSCAPG00000008696	MTREX	87	96.296	ENSECAG00000023723	MTREX	92	96.296	Equus_caballus
ENSCAPG00000008696	MTREX	91	82.562	ENSEEUG00000000527	MTREX	87	82.562	Erinaceus_europaeus
ENSCAPG00000008696	MTREX	94	78.282	ENSELUG00000004898	mtrex	90	79.080	Esox_lucius
ENSCAPG00000008696	MTREX	100	73.647	ENSFCAG00000010575	MTREX	96	73.647	Felis_catus
ENSCAPG00000008696	MTREX	98	68.769	ENSFALG00000010850	MTREX	95	68.769	Ficedula_albicollis
ENSCAPG00000008696	MTREX	100	73.647	ENSFDAG00000011199	MTREX	96	73.647	Fukomys_damarensis
ENSCAPG00000008696	MTREX	91	76.376	ENSFHEG00000023014	mtrex	84	76.376	Fundulus_heteroclitus
ENSCAPG00000008696	MTREX	92	74.718	ENSGMOG00000014702	mtrex	87	74.718	Gadus_morhua
ENSCAPG00000008696	MTREX	99	68.300	ENSGALG00000014709	MTREX	83	68.300	Gallus_gallus
ENSCAPG00000008696	MTREX	92	76.376	ENSGAFG00000012425	mtrex	88	76.376	Gambusia_affinis
ENSCAPG00000008696	MTREX	95	72.273	ENSGACG00000016260	mtrex	87	72.603	Gasterosteus_aculeatus
ENSCAPG00000008696	MTREX	100	69.069	ENSGAGG00000020036	MTREX	96	69.069	Gopherus_agassizii
ENSCAPG00000008696	MTREX	100	73.948	ENSGGOG00000001867	MTREX	96	73.948	Gorilla_gorilla
ENSCAPG00000008696	MTREX	95	75.342	ENSHBUG00000006229	mtrex	86	75.571	Haplochromis_burtoni
ENSCAPG00000008696	MTREX	100	74.048	ENSHGLG00000019445	SKIV2L2	96	74.048	Heterocephalus_glaber_female
ENSCAPG00000008696	MTREX	100	74.048	ENSHGLG00100011833	SKIV2L2	96	74.048	Heterocephalus_glaber_male
ENSCAPG00000008696	MTREX	90	77.752	ENSHCOG00000019995	mtrex	87	77.752	Hippocampus_comes
ENSCAPG00000008696	MTREX	99	64.930	ENSIPUG00000024348	skiv2l2	96	65.130	Ictalurus_punctatus
ENSCAPG00000008696	MTREX	100	73.747	ENSSTOG00000010802	MTREX	96	73.747	Ictidomys_tridecemlineatus
ENSCAPG00000008696	MTREX	100	67.755	ENSJJAG00000020975	Mtrex	96	67.755	Jaculus_jaculus
ENSCAPG00000008696	MTREX	93	75.571	ENSKMAG00000012642	mtrex	87	75.799	Kryptolebias_marmoratus
ENSCAPG00000008696	MTREX	95	76.256	ENSLBEG00000019367	mtrex	89	76.484	Labrus_bergylta
ENSCAPG00000008696	MTREX	100	67.700	ENSLACG00000009075	MTREX	97	67.700	Latimeria_chalumnae
ENSCAPG00000008696	MTREX	100	66.567	ENSLOCG00000010186	mtrex	97	66.567	Lepisosteus_oculatus
ENSCAPG00000008696	MTREX	96	87.045	ENSLAFG00000010497	MTREX	87	87.045	Loxodonta_africana
ENSCAPG00000008696	MTREX	100	73.848	ENSMFAG00000031610	MTREX	96	73.848	Macaca_fascicularis
ENSCAPG00000008696	MTREX	99	73.131	ENSMMUG00000010379	MTREX	95	73.131	Macaca_mulatta
ENSCAPG00000008696	MTREX	100	73.848	ENSMNEG00000032746	MTREX	96	73.848	Macaca_nemestrina
ENSCAPG00000008696	MTREX	100	73.848	ENSMLEG00000041051	MTREX	96	73.848	Mandrillus_leucophaeus
ENSCAPG00000008696	MTREX	96	76.818	ENSMAMG00000016753	mtrex	89	77.500	Mastacembelus_armatus
ENSCAPG00000008696	MTREX	95	75.342	ENSMZEG00005000414	mtrex	86	75.571	Maylandia_zebra
ENSCAPG00000008696	MTREX	95	54.628	ENSMGAG00000003980	MTREX	90	54.628	Meleagris_gallopavo
ENSCAPG00000008696	MTREX	100	72.946	ENSMAUG00000010727	Mtrex	96	72.946	Mesocricetus_auratus
ENSCAPG00000008696	MTREX	100	74.048	ENSMICG00000012779	MTREX	96	74.048	Microcebus_murinus
ENSCAPG00000008696	MTREX	100	72.745	ENSMOCG00000019886	Mtrex	96	72.745	Microtus_ochrogaster
ENSCAPG00000008696	MTREX	91	76.659	ENSMMOG00000002476	mtrex	87	76.659	Mola_mola
ENSCAPG00000008696	MTREX	100	70.441	ENSMODG00000019494	MTREX	97	70.441	Monodelphis_domestica
ENSCAPG00000008696	MTREX	91	75.751	ENSMALG00000002917	mtrex	89	75.751	Monopterus_albus
ENSCAPG00000008696	MTREX	100	72.244	MGP_CAROLIEiJ_G0018896	Mtrex	96	72.244	Mus_caroli
ENSCAPG00000008696	MTREX	100	72.545	ENSMUSG00000016018	Mtrex	96	72.545	Mus_musculus
ENSCAPG00000008696	MTREX	100	72.645	MGP_PahariEiJ_G0015967	Mtrex	96	72.645	Mus_pahari
ENSCAPG00000008696	MTREX	100	72.545	MGP_SPRETEiJ_G0019775	Mtrex	96	72.545	Mus_spretus
ENSCAPG00000008696	MTREX	100	73.747	ENSMPUG00000007619	MTREX	96	73.747	Mustela_putorius_furo
ENSCAPG00000008696	MTREX	100	72.827	ENSMLUG00000001152	MTREX	96	72.827	Myotis_lucifugus
ENSCAPG00000008696	MTREX	100	72.946	ENSNGAG00000011938	Mtrex	96	72.946	Nannospalax_galili
ENSCAPG00000008696	MTREX	95	75.342	ENSNBRG00000011293	mtrex	86	75.571	Neolamprologus_brichardi
ENSCAPG00000008696	MTREX	100	71.673	ENSNLEG00000001494	MTREX	96	71.673	Nomascus_leucogenys
ENSCAPG00000008696	MTREX	72	100.000	ENSMEUG00000006496	-	65	100.000	Notamacropus_eugenii
ENSCAPG00000008696	MTREX	96	79.727	ENSOPRG00000008009	MTREX	87	79.727	Ochotona_princeps
ENSCAPG00000008696	MTREX	100	73.494	ENSODEG00000017234	MTREX	96	73.494	Octodon_degus
ENSCAPG00000008696	MTREX	95	75.571	ENSONIG00000007587	mtrex	86	75.799	Oreochromis_niloticus
ENSCAPG00000008696	MTREX	100	73.848	ENSOCUG00000004463	MTREX	96	73.848	Oryctolagus_cuniculus
ENSCAPG00000008696	MTREX	95	75.455	ENSORLG00000005443	mtrex	87	75.455	Oryzias_latipes
ENSCAPG00000008696	MTREX	95	75.455	ENSORLG00020006329	mtrex	87	75.455	Oryzias_latipes_hni
ENSCAPG00000008696	MTREX	92	75.455	ENSORLG00015012924	mtrex	87	75.455	Oryzias_latipes_hsok
ENSCAPG00000008696	MTREX	92	74.318	ENSOMEG00000008825	mtrex	87	74.318	Oryzias_melastigma
ENSCAPG00000008696	MTREX	100	73.447	ENSOGAG00000002886	MTREX	96	73.447	Otolemur_garnettii
ENSCAPG00000008696	MTREX	99	73.547	ENSOARG00000007764	MTREX	95	73.547	Ovis_aries
ENSCAPG00000008696	MTREX	100	73.848	ENSPPAG00000039291	MTREX	96	73.848	Pan_paniscus
ENSCAPG00000008696	MTREX	100	73.647	ENSPPRG00000019701	MTREX	96	73.647	Panthera_pardus
ENSCAPG00000008696	MTREX	100	74.569	ENSPTIG00000009313	MTREX	96	74.569	Panthera_tigris_altaica
ENSCAPG00000008696	MTREX	100	73.848	ENSPTRG00000016878	MTREX	96	73.848	Pan_troglodytes
ENSCAPG00000008696	MTREX	100	73.848	ENSPANG00000009697	MTREX	96	73.848	Papio_anubis
ENSCAPG00000008696	MTREX	100	66.565	ENSPKIG00000020833	mtrex	99	64.802	Paramormyrops_kingsleyae
ENSCAPG00000008696	MTREX	99	69.238	ENSPSIG00000012150	MTREX	97	69.269	Pelodiscus_sinensis
ENSCAPG00000008696	MTREX	95	74.943	ENSPMGG00000002582	mtrex	89	75.806	Periophthalmus_magnuspinnatus
ENSCAPG00000008696	MTREX	93	48.614	ENSPMAG00000009668	mtrex	97	48.367	Petromyzon_marinus
ENSCAPG00000008696	MTREX	94	70.675	ENSPCIG00000024730	MTREX	100	70.675	Phascolarctos_cinereus
ENSCAPG00000008696	MTREX	72	76.256	ENSPFOG00000003141	mtrex	88	76.484	Poecilia_formosa
ENSCAPG00000008696	MTREX	91	76.606	ENSPLAG00000021311	mtrex	86	76.484	Poecilia_latipinna
ENSCAPG00000008696	MTREX	91	76.606	ENSPMEG00000010597	mtrex	90	76.606	Poecilia_mexicana
ENSCAPG00000008696	MTREX	91	76.147	ENSPREG00000003089	mtrex	86	76.027	Poecilia_reticulata
ENSCAPG00000008696	MTREX	98	73.496	ENSPPYG00000015469	MTREX	93	73.496	Pongo_abelii
ENSCAPG00000008696	MTREX	78	82.353	ENSPCAG00000013120	MTREX	69	82.353	Procavia_capensis
ENSCAPG00000008696	MTREX	82	69.431	ENSPCOG00000018092	MTREX	89	69.431	Propithecus_coquereli
ENSCAPG00000008696	MTREX	100	73.747	ENSPVAG00000002445	MTREX	96	73.747	Pteropus_vampyrus
ENSCAPG00000008696	MTREX	95	75.114	ENSPNYG00000006164	mtrex	86	75.342	Pundamilia_nyererei
ENSCAPG00000008696	MTREX	99	66.134	ENSPNAG00000008794	mtrex	96	66.134	Pygocentrus_nattereri
ENSCAPG00000008696	MTREX	99	71.630	ENSRNOG00000010125	Mtrex	93	71.630	Rattus_norvegicus
ENSCAPG00000008696	MTREX	100	73.802	ENSRBIG00000034930	MTREX	96	73.856	Rhinopithecus_bieti
ENSCAPG00000008696	MTREX	100	77.197	ENSRROG00000039895	MTREX	96	77.197	Rhinopithecus_roxellana
ENSCAPG00000008696	MTREX	88	50.122	YJL050W	MTR4	80	49.637	Saccharomyces_cerevisiae
ENSCAPG00000008696	MTREX	100	73.948	ENSSBOG00000026693	MTREX	98	73.948	Saimiri_boliviensis_boliviensis
ENSCAPG00000008696	MTREX	100	70.641	ENSSHAG00000004600	MTREX	100	70.641	Sarcophilus_harrisii
ENSCAPG00000008696	MTREX	100	66.467	ENSSFOG00015014355	skiv2l2	97	66.467	Scleropages_formosus
ENSCAPG00000008696	MTREX	95	76.256	ENSSMAG00000007572	mtrex	86	76.484	Scophthalmus_maximus
ENSCAPG00000008696	MTREX	92	76.484	ENSSDUG00000023789	mtrex	87	76.712	Seriola_dumerili
ENSCAPG00000008696	MTREX	95	76.484	ENSSLDG00000006301	mtrex	87	76.712	Seriola_lalandi_dorsalis
ENSCAPG00000008696	MTREX	95	73.263	ENSSARG00000008387	MTREX	91	73.263	Sorex_araneus
ENSCAPG00000008696	MTREX	99	65.426	ENSSPUG00000007071	MTREX	96	65.462	Sphenodon_punctatus
ENSCAPG00000008696	MTREX	91	77.346	ENSSPAG00000011319	mtrex	85	77.346	Stegastes_partitus
ENSCAPG00000008696	MTREX	100	73.447	ENSSSCG00000016911	MTREX	96	73.447	Sus_scrofa
ENSCAPG00000008696	MTREX	99	68.012	ENSTGUG00000002480	MTREX	96	68.012	Taeniopygia_guttata
ENSCAPG00000008696	MTREX	95	75.171	ENSTRUG00000014571	mtrex	87	75.342	Takifugu_rubripes
ENSCAPG00000008696	MTREX	88	91.111	ENSTBEG00000007769	MTREX	79	91.111	Tupaia_belangeri
ENSCAPG00000008696	MTREX	100	73.521	ENSTTRG00000008678	MTREX	96	73.521	Tursiops_truncatus
ENSCAPG00000008696	MTREX	99	73.668	ENSUAMG00000023061	MTREX	95	73.668	Ursus_americanus
ENSCAPG00000008696	MTREX	100	73.500	ENSUMAG00000009373	MTREX	99	74.856	Ursus_maritimus
ENSCAPG00000008696	MTREX	90	72.747	ENSVPAG00000011174	MTREX	81	72.747	Vicugna_pacos
ENSCAPG00000008696	MTREX	100	74.187	ENSVVUG00000021337	MTREX	96	74.187	Vulpes_vulpes
ENSCAPG00000008696	MTREX	99	67.200	ENSXETG00000032798	MTREX	97	67.200	Xenopus_tropicalis
ENSCAPG00000008696	MTREX	92	76.376	ENSXMAG00000004799	mtrex	88	76.376	Xiphophorus_maculatus