EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008722 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 21169 bases
Position: chrAVPZ01000944.1:5371296-5392464
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006594	YTH	PF04146.15	8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010277	YTHDC1-201	1791	-	ENSCAPP00000006594	596 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008722	YTHDC1	90	69.969	ENSG00000083896	YTHDC1	100	91.892	Homo_sapiens
ENSCAPG00000008722	YTHDC1	90	67.216	ENSAMEG00000005688	YTHDC1	90	67.727	Ailuropoda_melanoleuca
ENSCAPG00000008722	YTHDC1	63	45.556	ENSACIG00000019728	ythdc1	62	40.153	Amphilophus_citrinellus
ENSCAPG00000008722	YTHDC1	90	56.692	ENSAPLG00000009921	YTHDC1	91	59.610	Anas_platyrhynchos
ENSCAPG00000008722	YTHDC1	90	57.895	ENSACAG00000009697	YTHDC1	90	57.808	Anolis_carolinensis
ENSCAPG00000008722	YTHDC1	90	69.088	ENSANAG00000001522	YTHDC1	90	70.781	Aotus_nancymaae
ENSCAPG00000008722	YTHDC1	68	42.355	ENSACLG00000019371	ythdc1	91	41.755	Astatotilapia_calliptera
ENSCAPG00000008722	YTHDC1	89	48.318	ENSAMXG00000006978	ythdc1	90	48.536	Astyanax_mexicanus
ENSCAPG00000008722	YTHDC1	90	66.517	ENSBTAG00000015572	YTHDC1	90	67.044	Bos_taurus
ENSCAPG00000008722	YTHDC1	90	69.397	ENSCJAG00000009934	YTHDC1	90	71.094	Callithrix_jacchus
ENSCAPG00000008722	YTHDC1	90	67.216	ENSCAFG00000002821	YTHDC1	90	67.727	Canis_familiaris
ENSCAPG00000008722	YTHDC1	90	67.216	ENSCAFG00020027112	YTHDC1	82	77.838	Canis_lupus_dingo
ENSCAPG00000008722	YTHDC1	90	62.500	ENSCHIG00000004810	YTHDC1	96	70.356	Capra_hircus
ENSCAPG00000008722	YTHDC1	90	70.279	ENSTSYG00000011668	YTHDC1	90	71.205	Carlito_syrichta
ENSCAPG00000008722	YTHDC1	99	78.529	ENSCPOG00000010929	YTHDC1	98	78.529	Cavia_porcellus
ENSCAPG00000008722	YTHDC1	90	69.969	ENSCCAG00000035754	YTHDC1	90	70.423	Cebus_capucinus
ENSCAPG00000008722	YTHDC1	90	69.243	ENSCATG00000036320	YTHDC1	99	72.233	Cercocebus_atys
ENSCAPG00000008722	YTHDC1	99	74.131	ENSCLAG00000005482	YTHDC1	99	74.131	Chinchilla_lanigera
ENSCAPG00000008722	YTHDC1	90	68.872	ENSCSAG00000005252	YTHDC1	90	69.453	Chlorocebus_sabaeus
ENSCAPG00000008722	YTHDC1	90	61.732	ENSCPBG00000021965	YTHDC1	94	59.909	Chrysemys_picta_bellii
ENSCAPG00000008722	YTHDC1	90	69.243	ENSCANG00000004769	YTHDC1	98	72.233	Colobus_angolensis_palliatus
ENSCAPG00000008722	YTHDC1	90	69.350	ENSCGRG00001000816	Ythdc1	90	70.423	Cricetulus_griseus_chok1gshd
ENSCAPG00000008722	YTHDC1	90	69.127	ENSCGRG00000009807	Ythdc1	91	70.423	Cricetulus_griseus_crigri
ENSCAPG00000008722	YTHDC1	89	47.994	ENSDARG00000051953	ythdc1	58	52.000	Danio_rerio
ENSCAPG00000008722	YTHDC1	90	66.316	ENSDNOG00000004949	YTHDC1	90	66.565	Dasypus_novemcinctus
ENSCAPG00000008722	YTHDC1	90	66.306	ENSDORG00000013045	Ythdc1	91	67.812	Dipodomys_ordii
ENSCAPG00000008722	YTHDC1	75	90.863	ENSETEG00000001878	YTHDC1	63	92.857	Echinops_telfairi
ENSCAPG00000008722	YTHDC1	90	67.515	ENSEASG00005018383	YTHDC1	92	66.400	Equus_asinus_asinus
ENSCAPG00000008722	YTHDC1	90	89.680	ENSECAG00000018303	YTHDC1	79	90.476	Equus_caballus
ENSCAPG00000008722	YTHDC1	90	65.465	ENSEEUG00000015466	YTHDC1	90	65.653	Erinaceus_europaeus
ENSCAPG00000008722	YTHDC1	89	46.617	ENSELUG00000014029	ythdc1	92	45.972	Esox_lucius
ENSCAPG00000008722	YTHDC1	90	67.643	ENSFCAG00000026791	YTHDC1	90	68.643	Felis_catus
ENSCAPG00000008722	YTHDC1	60	56.522	ENSFALG00000006581	YTHDC1	79	56.522	Ficedula_albicollis
ENSCAPG00000008722	YTHDC1	99	73.157	ENSFDAG00000018560	YTHDC1	91	71.205	Fukomys_damarensis
ENSCAPG00000008722	YTHDC1	90	58.195	ENSGALG00000035906	YTHDC1	89	61.610	Gallus_gallus
ENSCAPG00000008722	YTHDC1	90	61.890	ENSGAGG00000007108	YTHDC1	90	63.522	Gopherus_agassizii
ENSCAPG00000008722	YTHDC1	90	69.088	ENSGGOG00000021958	YTHDC1	98	72.045	Gorilla_gorilla
ENSCAPG00000008722	YTHDC1	68	42.355	ENSHBUG00000019288	ythdc1	91	41.755	Haplochromis_burtoni
ENSCAPG00000008722	YTHDC1	90	68.731	ENSHGLG00000006319	-	90	70.892	Heterocephalus_glaber_female
ENSCAPG00000008722	YTHDC1	92	56.426	ENSHGLG00000003239	-	57	54.211	Heterocephalus_glaber_female
ENSCAPG00000008722	YTHDC1	90	68.816	ENSHGLG00100001556	-	91	69.803	Heterocephalus_glaber_male
ENSCAPG00000008722	YTHDC1	92	55.231	ENSHGLG00100008060	-	57	52.417	Heterocephalus_glaber_male
ENSCAPG00000008722	YTHDC1	89	47.368	ENSIPUG00000018136	ythdc1	59	52.217	Ictalurus_punctatus
ENSCAPG00000008722	YTHDC1	90	68.598	ENSSTOG00000013652	YTHDC1	90	70.062	Ictidomys_tridecemlineatus
ENSCAPG00000008722	YTHDC1	90	64.396	ENSJJAG00000010268	Ythdc1	91	66.510	Jaculus_jaculus
ENSCAPG00000008722	YTHDC1	85	49.689	ENSLACG00000004893	YTHDC1	92	49.296	Latimeria_chalumnae
ENSCAPG00000008722	YTHDC1	90	50.901	ENSLOCG00000003045	ythdc1	89	52.009	Lepisosteus_oculatus
ENSCAPG00000008722	YTHDC1	90	67.756	ENSLAFG00000021592	YTHDC1	84	93.956	Loxodonta_africana
ENSCAPG00000008722	YTHDC1	90	69.243	ENSMFAG00000031927	YTHDC1	98	72.233	Macaca_fascicularis
ENSCAPG00000008722	YTHDC1	90	69.243	ENSMMUG00000002265	YTHDC1	97	75.581	Macaca_mulatta
ENSCAPG00000008722	YTHDC1	90	69.243	ENSMNEG00000033751	YTHDC1	98	72.233	Macaca_nemestrina
ENSCAPG00000008722	YTHDC1	90	69.243	ENSMLEG00000042147	YTHDC1	98	72.233	Mandrillus_leucophaeus
ENSCAPG00000008722	YTHDC1	68	42.355	ENSMZEG00005023173	ythdc1	91	41.755	Maylandia_zebra
ENSCAPG00000008722	YTHDC1	90	56.391	ENSMGAG00000010391	YTHDC1	90	59.159	Meleagris_gallopavo
ENSCAPG00000008722	YTHDC1	90	69.040	ENSMAUG00000001286	Ythdc1	90	70.110	Mesocricetus_auratus
ENSCAPG00000008722	YTHDC1	90	67.802	ENSMICG00000034640	YTHDC1	89	69.640	Microcebus_murinus
ENSCAPG00000008722	YTHDC1	90	66.873	ENSMOCG00000020201	Ythdc1	90	69.640	Microtus_ochrogaster
ENSCAPG00000008722	YTHDC1	94	38.152	ENSMODG00000014337	-	76	57.812	Monodelphis_domestica
ENSCAPG00000008722	YTHDC1	90	60.693	ENSMODG00000020754	-	90	60.731	Monodelphis_domestica
ENSCAPG00000008722	YTHDC1	58	32.649	ENSMODG00000009173	-	55	38.372	Monodelphis_domestica
ENSCAPG00000008722	YTHDC1	93	33.476	ENSMODG00000010076	-	71	36.145	Monodelphis_domestica
ENSCAPG00000008722	YTHDC1	90	67.079	MGP_CAROLIEiJ_G0027347	Ythdc1	95	72.868	Mus_caroli
ENSCAPG00000008722	YTHDC1	90	68.148	ENSMUSG00000035851	Ythdc1	95	73.888	Mus_musculus
ENSCAPG00000008722	YTHDC1	90	68.827	MGP_PahariEiJ_G0017126	Ythdc1	95	74.081	Mus_pahari
ENSCAPG00000008722	YTHDC1	90	68.827	MGP_SPRETEiJ_G0028339	Ythdc1	95	74.081	Mus_spretus
ENSCAPG00000008722	YTHDC1	90	43.769	ENSMPUG00000001743	YTHDC1	67	61.481	Mustela_putorius_furo
ENSCAPG00000008722	YTHDC1	90	66.617	ENSMLUG00000016300	YTHDC1	92	66.210	Myotis_lucifugus
ENSCAPG00000008722	YTHDC1	55	82.436	ENSNGAG00000024000	Ythdc1	78	82.436	Nannospalax_galili
ENSCAPG00000008722	YTHDC1	91	67.010	ENSNLEG00000009202	YTHDC1	98	70.644	Nomascus_leucogenys
ENSCAPG00000008722	YTHDC1	54	98.214	ENSMEUG00000007128	YTHDC1	52	68.750	Notamacropus_eugenii
ENSCAPG00000008722	YTHDC1	64	87.931	ENSOPRG00000008986	YTHDC1	57	87.931	Ochotona_princeps
ENSCAPG00000008722	YTHDC1	90	68.731	ENSODEG00000001715	YTHDC1	90	69.014	Octodon_degus
ENSCAPG00000008722	YTHDC1	72	88.462	ENSONIG00000012651	ythdc1	91	41.906	Oreochromis_niloticus
ENSCAPG00000008722	YTHDC1	87	46.466	ENSOANG00000014398	YTHDC1	73	61.677	Ornithorhynchus_anatinus
ENSCAPG00000008722	YTHDC1	90	53.073	ENSOCUG00000015886	YTHDC1	50	56.620	Oryctolagus_cuniculus
ENSCAPG00000008722	YTHDC1	89	38.124	ENSORLG00000030544	ythdc1	92	42.462	Oryzias_latipes
ENSCAPG00000008722	YTHDC1	89	38.998	ENSORLG00020019316	ythdc1	92	42.462	Oryzias_latipes_hni
ENSCAPG00000008722	YTHDC1	90	69.277	ENSOGAG00000003362	YTHDC1	90	69.254	Otolemur_garnettii
ENSCAPG00000008722	YTHDC1	90	66.517	ENSOARG00000008633	YTHDC1	90	66.565	Ovis_aries
ENSCAPG00000008722	YTHDC1	90	69.969	ENSPPAG00000041315	YTHDC1	98	71.857	Pan_paniscus
ENSCAPG00000008722	YTHDC1	90	67.616	ENSPPRG00000011979	YTHDC1	90	68.799	Panthera_pardus
ENSCAPG00000008722	YTHDC1	90	67.916	ENSPTIG00000015527	YTHDC1	91	68.847	Panthera_tigris_altaica
ENSCAPG00000008722	YTHDC1	90	69.969	ENSPTRG00000016105	YTHDC1	98	71.857	Pan_troglodytes
ENSCAPG00000008722	YTHDC1	90	69.243	ENSPANG00000021590	YTHDC1	97	72.233	Papio_anubis
ENSCAPG00000008722	YTHDC1	90	47.994	ENSPKIG00000018497	ythdc1	90	47.612	Paramormyrops_kingsleyae
ENSCAPG00000008722	YTHDC1	90	58.346	ENSPSIG00000002782	YTHDC1	91	59.009	Pelodiscus_sinensis
ENSCAPG00000008722	YTHDC1	90	69.350	ENSPEMG00000013850	Ythdc1	91	70.423	Peromyscus_maniculatus_bairdii
ENSCAPG00000008722	YTHDC1	90	60.542	ENSPCIG00000006870	YTHDC1	90	61.502	Phascolarctos_cinereus
ENSCAPG00000008722	YTHDC1	61	50.704	ENSPREG00000016973	ythdc1	90	39.344	Poecilia_reticulata
ENSCAPG00000008722	YTHDC1	76	64.103	ENSPPYG00000014726	YTHDC1	91	65.917	Pongo_abelii
ENSCAPG00000008722	YTHDC1	81	77.950	ENSPCAG00000009607	YTHDC1	74	76.636	Procavia_capensis
ENSCAPG00000008722	YTHDC1	90	67.581	ENSPCOG00000019105	YTHDC1	90	69.331	Propithecus_coquereli
ENSCAPG00000008722	YTHDC1	90	64.978	ENSPVAG00000015551	YTHDC1	90	64.750	Pteropus_vampyrus
ENSCAPG00000008722	YTHDC1	68	42.355	ENSPNYG00000011687	ythdc1	91	41.755	Pundamilia_nyererei
ENSCAPG00000008722	YTHDC1	89	49.231	ENSPNAG00000028365	ythdc1	90	48.769	Pygocentrus_nattereri
ENSCAPG00000008722	YTHDC1	90	66.765	ENSRNOG00000001996	Ythdc1	91	67.115	Rattus_norvegicus
ENSCAPG00000008722	YTHDC1	91	67.496	ENSRBIG00000028279	YTHDC1	98	71.563	Rhinopithecus_bieti
ENSCAPG00000008722	YTHDC1	90	69.243	ENSRROG00000035028	YTHDC1	98	72.233	Rhinopithecus_roxellana
ENSCAPG00000008722	YTHDC1	90	69.397	ENSSBOG00000022353	YTHDC1	98	72.420	Saimiri_boliviensis_boliviensis
ENSCAPG00000008722	YTHDC1	90	59.639	ENSSHAG00000002538	YTHDC1	90	60.731	Sarcophilus_harrisii
ENSCAPG00000008722	YTHDC1	90	47.840	ENSSFOG00015003298	ythdc1	58	53.904	Scleropages_formosus
ENSCAPG00000008722	YTHDC1	89	36.070	ENSSMAG00000009086	ythdc1	91	41.515	Scophthalmus_maximus
ENSCAPG00000008722	YTHDC1	68	44.676	ENSSDUG00000022008	ythdc1	91	42.835	Seriola_dumerili
ENSCAPG00000008722	YTHDC1	67	61.017	ENSSARG00000010960	YTHDC1	91	61.185	Sorex_araneus
ENSCAPG00000008722	YTHDC1	99	60.619	ENSSPUG00000009357	YTHDC1	89	60.130	Sphenodon_punctatus
ENSCAPG00000008722	YTHDC1	90	67.025	ENSSSCG00000035505	YTHDC1	90	67.331	Sus_scrofa
ENSCAPG00000008722	YTHDC1	90	58.797	ENSTGUG00000004452	-	90	58.408	Taeniopygia_guttata
ENSCAPG00000008722	YTHDC1	89	34.227	ENSTNIG00000013243	ythdc1	86	43.182	Tetraodon_nigroviridis
ENSCAPG00000008722	YTHDC1	90	59.729	ENSTBEG00000011546	YTHDC1	90	61.280	Tupaia_belangeri
ENSCAPG00000008722	YTHDC1	90	66.567	ENSTTRG00000005083	YTHDC1	90	66.616	Tursiops_truncatus
ENSCAPG00000008722	YTHDC1	84	65.635	ENSUAMG00000010388	YTHDC1	92	66.997	Ursus_americanus
ENSCAPG00000008722	YTHDC1	90	61.479	ENSUMAG00000013668	YTHDC1	89	59.594	Ursus_maritimus
ENSCAPG00000008722	YTHDC1	90	67.183	ENSVPAG00000009040	YTHDC1	90	67.712	Vicugna_pacos
ENSCAPG00000008722	YTHDC1	90	67.665	ENSVVUG00000005387	YTHDC1	81	78.108	Vulpes_vulpes
ENSCAPG00000008722	YTHDC1	90	54.317	ENSXETG00000017960	ythdc1	90	54.389	Xenopus_tropicalis