EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008729 (Gene tree)
Gene ID: -
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 41585 bases
Position: chrAVPZ01000445.1:4321480-4363064
Accession: 29389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006602	SRRM_C	PF15230.6	5.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010284	SRRM4-201	1584	-	ENSCAPP00000006602	527 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008729	SRRM4	88	90.129	ENSG00000139767	SRRM4	79	82.692	Homo_sapiens
ENSCAPG00000008729	SRRM4	88	88.602	ENSAMEG00000016072	SRRM4	85	88.578	Ailuropoda_melanoleuca
ENSCAPG00000008729	SRRM4	67	50.811	ENSAPLG00000009202	SRRM4	80	53.040	Anas_platyrhynchos
ENSCAPG00000008729	SRRM4	86	46.398	ENSACAG00000004139	SRRM4	77	46.497	Anolis_carolinensis
ENSCAPG00000008729	SRRM4	88	89.700	ENSCAFG00000023113	SRRM4	76	89.677	Canis_familiaris
ENSCAPG00000008729	SRRM4	58	90.228	ENSCAFG00020018665	SRRM4	54	90.196	Canis_lupus_dingo
ENSCAPG00000008729	SRRM4	88	73.932	ENSCHIG00000019151	SRRM4	55	88.673	Capra_hircus
ENSCAPG00000008729	SRRM4	88	88.651	ENSTSYG00000012239	SRRM4	82	88.627	Carlito_syrichta
ENSCAPG00000008729	SRRM4	100	93.440	ENSCPOG00000003544	SRRM4	93	93.440	Cavia_porcellus
ENSCAPG00000008729	SRRM4	88	89.700	ENSCSAG00000002300	SRRM4	84	83.236	Chlorocebus_sabaeus
ENSCAPG00000008729	SRRM4	84	58.531	ENSCPBG00000012293	SRRM4	76	60.294	Chrysemys_picta_bellii
ENSCAPG00000008729	SRRM4	88	81.075	ENSCGRG00001000544	Srrm4	83	75.498	Cricetulus_griseus_chok1gshd
ENSCAPG00000008729	SRRM4	88	76.344	ENSCGRG00000006973	Srrm4	75	75.431	Cricetulus_griseus_crigri
ENSCAPG00000008729	SRRM4	88	87.339	ENSDNOG00000000260	SRRM4	78	87.312	Dasypus_novemcinctus
ENSCAPG00000008729	SRRM4	88	79.443	ENSDORG00000015243	Srrm4	77	79.785	Dipodomys_ordii
ENSCAPG00000008729	SRRM4	88	89.485	ENSFCAG00000010536	SRRM4	74	89.462	Felis_catus
ENSCAPG00000008729	SRRM4	88	90.343	ENSFDAG00000007218	SRRM4	84	85.965	Fukomys_damarensis
ENSCAPG00000008729	SRRM4	63	58.841	ENSGAGG00000017218	SRRM4	76	57.543	Gopherus_agassizii
ENSCAPG00000008729	SRRM4	88	93.777	ENSHGLG00000007830	SRRM4	77	93.763	Heterocephalus_glaber_female
ENSCAPG00000008729	SRRM4	99	81.509	ENSHGLG00100008549	SRRM4	88	84.861	Heterocephalus_glaber_male
ENSCAPG00000008729	SRRM4	88	79.399	ENSSTOG00000026642	SRRM4	87	74.701	Ictidomys_tridecemlineatus
ENSCAPG00000008729	SRRM4	88	83.761	ENSJJAG00000016448	Srrm4	79	86.296	Jaculus_jaculus
ENSCAPG00000008729	SRRM4	88	86.724	ENSLAFG00000003731	SRRM4	83	81.871	Loxodonta_africana
ENSCAPG00000008729	SRRM4	88	89.914	ENSMFAG00000041271	SRRM4	82	82.908	Macaca_fascicularis
ENSCAPG00000008729	SRRM4	88	81.277	ENSMMUG00000021230	SRRM4	83	74.514	Macaca_mulatta
ENSCAPG00000008729	SRRM4	88	89.700	ENSMNEG00000044154	SRRM4	82	82.711	Macaca_nemestrina
ENSCAPG00000008729	SRRM4	88	89.485	ENSMLEG00000034455	SRRM4	83	83.041	Mandrillus_leucophaeus
ENSCAPG00000008729	SRRM4	87	54.008	ENSMGAG00000009082	SRRM4	83	53.254	Meleagris_gallopavo
ENSCAPG00000008729	SRRM4	88	80.430	ENSMAUG00000013203	Srrm4	84	74.656	Mesocricetus_auratus
ENSCAPG00000008729	SRRM4	88	80.215	ENSMOCG00000006737	Srrm4	87	72.888	Microtus_ochrogaster
ENSCAPG00000008729	SRRM4	97	51.434	ENSMODG00000015283	SRRM4	50	49.847	Monodelphis_domestica
ENSCAPG00000008729	SRRM4	88	85.591	MGP_CAROLIEiJ_G0027638	Srrm4	82	77.246	Mus_caroli
ENSCAPG00000008729	SRRM4	88	84.946	ENSMUSG00000063919	Srrm4	76	84.052	Mus_musculus
ENSCAPG00000008729	SRRM4	88	83.476	MGP_PahariEiJ_G0024219	Srrm4	82	75.400	Mus_pahari
ENSCAPG00000008729	SRRM4	88	85.161	MGP_SPRETEiJ_G0028637	Srrm4	76	84.267	Mus_spretus
ENSCAPG00000008729	SRRM4	88	89.056	ENSMPUG00000002930	SRRM4	77	89.032	Mustela_putorius_furo
ENSCAPG00000008729	SRRM4	88	87.366	ENSNGAG00000020807	Srrm4	85	81.942	Nannospalax_galili
ENSCAPG00000008729	SRRM4	88	89.914	ENSNLEG00000000200	SRRM4	83	83.431	Nomascus_leucogenys
ENSCAPG00000008729	SRRM4	88	80.591	ENSOPRG00000016981	SRRM4	75	75.388	Ochotona_princeps
ENSCAPG00000008729	SRRM4	88	93.978	ENSODEG00000006291	SRRM4	88	87.716	Octodon_degus
ENSCAPG00000008729	SRRM4	88	86.296	ENSOCUG00000004503	SRRM4	75	81.299	Oryctolagus_cuniculus
ENSCAPG00000008729	SRRM4	88	90.150	ENSOGAG00000015431	SRRM4	84	84.766	Otolemur_garnettii
ENSCAPG00000008729	SRRM4	88	89.485	ENSPPRG00000002659	SRRM4	75	89.462	Panthera_pardus
ENSCAPG00000008729	SRRM4	88	59.259	ENSPTIG00000011414	SRRM4	60	79.412	Panthera_tigris_altaica
ENSCAPG00000008729	SRRM4	88	89.485	ENSPANG00000022544	SRRM4	91	89.462	Papio_anubis
ENSCAPG00000008729	SRRM4	88	79.828	ENSPEMG00000001823	Srrm4	91	75.542	Peromyscus_maniculatus_bairdii
ENSCAPG00000008729	SRRM4	88	91.202	ENSPCOG00000013803	SRRM4	85	85.714	Propithecus_coquereli
ENSCAPG00000008729	SRRM4	88	85.591	ENSRNOG00000001141	Srrm4	84	76.817	Rattus_norvegicus
ENSCAPG00000008729	SRRM4	79	91.408	ENSSBOG00000035310	SRRM4	75	91.388	Saimiri_boliviensis_boliviensis
ENSCAPG00000008729	SRRM4	88	65.574	ENSSHAG00000017330	SRRM4	85	63.450	Sarcophilus_harrisii
ENSCAPG00000008729	SRRM4	58	83.007	ENSSARG00000012647	SRRM4	54	82.951	Sorex_araneus
ENSCAPG00000008729	SRRM4	50	57.303	ENSTGUG00000009228	SRRM4	79	54.329	Taeniopygia_guttata
ENSCAPG00000008729	SRRM4	88	51.068	ENSVPAG00000007937	SRRM4	63	83.721	Vicugna_pacos
ENSCAPG00000008729	SRRM4	50	89.015	ENSVVUG00000013334	SRRM4	71	88.973	Vulpes_vulpes
ENSCAPG00000008729	SRRM4	54	47.635	ENSXETG00000019934	SRRM4	80	47.098	Xenopus_tropicalis