EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008758 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 4430 bases
Position: chrAVPZ01000023.1:12360580-12365009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006643	SRP40_C	PF05022.12	6.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010325	-	1548	-	ENSCAPP00000006643	515 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008758	-	83	78.462	ENSG00000166197	NOLC1	60	79.688	Homo_sapiens
ENSCAPG00000008758	-	91	72.554	ENSAMEG00000017687	NOLC1	61	73.278	Ailuropoda_melanoleuca
ENSCAPG00000008758	-	84	81.081	ENSANAG00000026475	-	56	81.081	Aotus_nancymaae
ENSCAPG00000008758	-	70	89.189	ENSBTAG00000007435	NOLC1	57	89.189	Bos_taurus
ENSCAPG00000008758	-	77	88.571	ENSCJAG00000017832	NOLC1	56	90.000	Callithrix_jacchus
ENSCAPG00000008758	-	83	84.615	ENSCAFG00000010062	NOLC1	59	84.615	Canis_familiaris
ENSCAPG00000008758	-	84	78.873	ENSCAFG00020010146	NOLC1	60	78.873	Canis_lupus_dingo
ENSCAPG00000008758	-	71	97.297	ENSCHIG00000016755	NOLC1	56	97.297	Capra_hircus
ENSCAPG00000008758	-	70	100.000	ENSTSYG00000011322	NOLC1	59	97.500	Carlito_syrichta
ENSCAPG00000008758	-	97	93.629	ENSCPOG00000004504	NOLC1	63	95.225	Cavia_porcellus
ENSCAPG00000008758	-	77	91.429	ENSCCAG00000031293	NOLC1	57	92.500	Cebus_capucinus
ENSCAPG00000008758	-	77	94.118	ENSCATG00000020949	NOLC1	66	72.131	Cercocebus_atys
ENSCAPG00000008758	-	84	72.965	ENSCLAG00000001046	NOLC1	62	73.256	Chinchilla_lanigera
ENSCAPG00000008758	-	79	90.000	ENSCSAG00000005465	NOLC1	59	74.204	Chlorocebus_sabaeus
ENSCAPG00000008758	-	71	70.968	ENSCANG00000032550	NOLC1	65	67.575	Colobus_angolensis_palliatus
ENSCAPG00000008758	-	79	67.485	ENSCGRG00001009806	Nolc1	58	84.058	Cricetulus_griseus_chok1gshd
ENSCAPG00000008758	-	79	67.485	ENSCGRG00000005530	Nolc1	58	84.058	Cricetulus_griseus_crigri
ENSCAPG00000008758	-	99	90.244	ENSDNOG00000025256	NOLC1	63	90.244	Dasypus_novemcinctus
ENSCAPG00000008758	-	82	64.350	ENSDORG00000001056	Nolc1	55	90.000	Dipodomys_ordii
ENSCAPG00000008758	-	78	100.000	ENSEASG00005007519	NOLC1	54	100.000	Equus_asinus_asinus
ENSCAPG00000008758	-	77	100.000	ENSECAG00000024700	NOLC1	62	72.329	Equus_caballus
ENSCAPG00000008758	-	77	91.429	ENSEEUG00000003212	NOLC1	55	92.500	Erinaceus_europaeus
ENSCAPG00000008758	-	83	84.615	ENSFCAG00000001239	NOLC1	59	85.938	Felis_catus
ENSCAPG00000008758	-	96	72.656	ENSFDAG00000006050	NOLC1	65	72.656	Fukomys_damarensis
ENSCAPG00000008758	-	83	75.385	ENSGGOG00000002158	NOLC1	59	76.562	Gorilla_gorilla
ENSCAPG00000008758	-	88	68.807	ENSHGLG00000003156	NOLC1	62	72.176	Heterocephalus_glaber_female
ENSCAPG00000008758	-	88	68.807	ENSHGLG00100008172	NOLC1	66	72.176	Heterocephalus_glaber_male
ENSCAPG00000008758	-	91	72.011	ENSSTOG00000002168	NOLC1	62	73.003	Ictidomys_tridecemlineatus
ENSCAPG00000008758	-	78	92.500	ENSJJAG00000021131	Nolc1	57	92.500	Jaculus_jaculus
ENSCAPG00000008758	-	78	89.474	ENSLAFG00000014245	NOLC1	66	68.207	Loxodonta_africana
ENSCAPG00000008758	-	77	94.118	ENSMFAG00000044654	NOLC1	66	71.585	Macaca_fascicularis
ENSCAPG00000008758	-	77	94.118	ENSMMUG00000001183	NOLC1	58	92.500	Macaca_mulatta
ENSCAPG00000008758	-	77	94.118	ENSMNEG00000033199	NOLC1	75	72.131	Macaca_nemestrina
ENSCAPG00000008758	-	77	88.235	ENSMLEG00000040773	NOLC1	55	87.500	Mandrillus_leucophaeus
ENSCAPG00000008758	-	91	70.889	ENSMICG00000011811	NOLC1	62	71.311	Microcebus_murinus
ENSCAPG00000008758	-	78	90.000	ENSMOCG00000015232	Nolc1	52	90.000	Microtus_ochrogaster
ENSCAPG00000008758	-	96	71.545	ENSMPUG00000016887	NOLC1	65	71.703	Mustela_putorius_furo
ENSCAPG00000008758	-	71	69.437	ENSMLUG00000001726	NOLC1	62	70.652	Myotis_lucifugus
ENSCAPG00000008758	-	78	87.179	ENSNGAG00000024139	Nolc1	54	87.500	Nannospalax_galili
ENSCAPG00000008758	-	77	85.294	ENSNLEG00000015012	NOLC1	65	71.703	Nomascus_leucogenys
ENSCAPG00000008758	-	69	84.375	ENSOPRG00000009381	NOLC1	53	86.842	Ochotona_princeps
ENSCAPG00000008758	-	91	68.219	ENSODEG00000006304	NOLC1	62	70.166	Octodon_degus
ENSCAPG00000008758	-	83	73.476	ENSOCUG00000000516	-	66	72.099	Oryctolagus_cuniculus
ENSCAPG00000008758	-	91	69.189	ENSOGAG00000016359	NOLC1	62	68.595	Otolemur_garnettii
ENSCAPG00000008758	-	70	97.297	ENSOARG00000017556	NOLC1	55	97.297	Ovis_aries
ENSCAPG00000008758	-	83	78.462	ENSPPAG00000038082	NOLC1	61	79.688	Pan_paniscus
ENSCAPG00000008758	-	83	84.615	ENSPPRG00000003072	NOLC1	59	85.938	Panthera_pardus
ENSCAPG00000008758	-	84	81.690	ENSPTIG00000014862	NOLC1	60	83.099	Panthera_tigris_altaica
ENSCAPG00000008758	-	83	78.462	ENSPTRG00000023882	NOLC1	59	79.688	Pan_troglodytes
ENSCAPG00000008758	-	77	94.118	ENSPANG00000021014	NOLC1	65	72.131	Papio_anubis
ENSCAPG00000008758	-	83	76.923	ENSPPYG00000002595	NOLC1	61	78.125	Pongo_abelii
ENSCAPG00000008758	-	77	91.176	ENSPCOG00000019070	-	59	90.000	Propithecus_coquereli
ENSCAPG00000008758	-	90	70.109	ENSPVAG00000004050	NOLC1	61	68.044	Pteropus_vampyrus
ENSCAPG00000008758	-	80	86.000	ENSRNOG00000018704	Nolc1	62	69.501	Rattus_norvegicus
ENSCAPG00000008758	-	88	65.239	ENSRBIG00000032216	NOLC1	68	65.051	Rhinopithecus_bieti
ENSCAPG00000008758	-	78	94.286	ENSRROG00000038056	NOLC1	66	70.492	Rhinopithecus_roxellana
ENSCAPG00000008758	-	77	94.286	ENSSBOG00000031205	NOLC1	63	72.087	Saimiri_boliviensis_boliviensis
ENSCAPG00000008758	-	72	75.385	ENSSARG00000004111	NOLC1	57	76.562	Sorex_araneus
ENSCAPG00000008758	-	69	100.000	ENSSSCG00000010576	NOLC1	62	68.956	Sus_scrofa
ENSCAPG00000008758	-	91	69.106	ENSTTRG00000014974	NOLC1	64	71.703	Tursiops_truncatus
ENSCAPG00000008758	-	83	87.692	ENSUAMG00000028059	NOLC1	59	89.062	Ursus_americanus
ENSCAPG00000008758	-	83	87.692	ENSUMAG00000023063	NOLC1	59	89.062	Ursus_maritimus
ENSCAPG00000008758	-	99	68.120	ENSVVUG00000002661	NOLC1	61	80.822	Vulpes_vulpes