EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008780 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 19382 bases
Position: chrAVPZ01000156.1:2395055-2414436
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006693	SRP54	PF00448.22	8.5e-38	1	2
ENSCAPP00000006693	SRP54	PF00448.22	8.5e-38	2	2
ENSCAPP00000006693	SRP54_N	PF02881.19	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010376	SRP54-201	1287	-	ENSCAPP00000006693	429 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008780	SRP54	100	64.286	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSCAPG00000008780	SRP54	100	61.633	ENSAPOG00000011314	srp54	94	61.633	Acanthochromis_polyacanthus
ENSCAPG00000008780	SRP54	100	64.286	ENSAMEG00000015544	SRP54	94	64.286	Ailuropoda_melanoleuca
ENSCAPG00000008780	SRP54	84	66.334	ENSACIG00000022831	srp54	83	66.334	Amphilophus_citrinellus
ENSCAPG00000008780	SRP54	100	61.633	ENSAOCG00000019401	srp54	94	61.633	Amphiprion_ocellaris
ENSCAPG00000008780	SRP54	100	61.633	ENSAPEG00000001977	srp54	94	61.633	Amphiprion_percula
ENSCAPG00000008780	SRP54	100	62.041	ENSATEG00000013877	srp54	94	62.041	Anabas_testudineus
ENSCAPG00000008780	SRP54	100	63.469	ENSAPLG00000010125	SRP54	95	63.469	Anas_platyrhynchos
ENSCAPG00000008780	SRP54	64	56.013	ENSACAG00000001124	-	90	56.013	Anolis_carolinensis
ENSCAPG00000008780	SRP54	100	63.061	ENSACAG00000002103	-	94	63.061	Anolis_carolinensis
ENSCAPG00000008780	SRP54	85	60.494	ENSACAG00000010631	-	90	60.494	Anolis_carolinensis
ENSCAPG00000008780	SRP54	100	66.026	ENSANAG00000022133	SRP54	87	91.304	Aotus_nancymaae
ENSCAPG00000008780	SRP54	100	61.837	ENSACLG00000015866	srp54	94	61.837	Astatotilapia_calliptera
ENSCAPG00000008780	SRP54	100	61.837	ENSAMXG00000032669	SRP54	94	61.837	Astyanax_mexicanus
ENSCAPG00000008780	SRP54	100	64.286	ENSBTAG00000019085	SRP54	94	64.286	Bos_taurus
ENSCAPG00000008780	SRP54	100	47.273	WBGene00009012	F21D5.7	96	47.273	Caenorhabditis_elegans
ENSCAPG00000008780	SRP54	100	64.286	ENSCJAG00000006581	SRP54	87	91.304	Callithrix_jacchus
ENSCAPG00000008780	SRP54	100	64.286	ENSCAFG00000013331	SRP54	94	64.286	Canis_familiaris
ENSCAPG00000008780	SRP54	100	64.286	ENSCAFG00020023427	SRP54	94	64.286	Canis_lupus_dingo
ENSCAPG00000008780	SRP54	100	64.286	ENSCHIG00000026345	SRP54	94	64.286	Capra_hircus
ENSCAPG00000008780	SRP54	100	57.143	ENSTSYG00000035333	-	93	57.143	Carlito_syrichta
ENSCAPG00000008780	SRP54	100	64.286	ENSTSYG00000002680	-	94	64.286	Carlito_syrichta
ENSCAPG00000008780	SRP54	100	64.213	ENSCPOG00000003691	SRP54	94	64.213	Cavia_porcellus
ENSCAPG00000008780	SRP54	100	58.085	ENSCCAG00000024179	SRP54	93	61.728	Cebus_capucinus
ENSCAPG00000008780	SRP54	100	64.286	ENSCATG00000034083	SRP54	87	91.304	Cercocebus_atys
ENSCAPG00000008780	SRP54	100	64.286	ENSCLAG00000015076	SRP54	94	64.286	Chinchilla_lanigera
ENSCAPG00000008780	SRP54	100	64.286	ENSCSAG00000015575	SRP54	94	64.286	Chlorocebus_sabaeus
ENSCAPG00000008780	SRP54	80	70.270	ENSCHOG00000008986	SRP54	82	70.270	Choloepus_hoffmanni
ENSCAPG00000008780	SRP54	100	63.673	ENSCPBG00000026195	SRP54	94	63.673	Chrysemys_picta_bellii
ENSCAPG00000008780	SRP54	100	54.251	ENSCING00000007380	-	94	54.251	Ciona_intestinalis
ENSCAPG00000008780	SRP54	100	64.286	ENSCANG00000028532	SRP54	87	91.304	Colobus_angolensis_palliatus
ENSCAPG00000008780	SRP54	100	64.082	ENSCGRG00001009525	-	94	64.082	Cricetulus_griseus_chok1gshd
ENSCAPG00000008780	SRP54	85	68.642	ENSCGRG00000009453	-	89	68.642	Cricetulus_griseus_crigri
ENSCAPG00000008780	SRP54	100	61.224	ENSCSEG00000012392	srp54	94	61.224	Cynoglossus_semilaevis
ENSCAPG00000008780	SRP54	100	61.837	ENSCVAG00000010395	srp54	94	61.837	Cyprinodon_variegatus
ENSCAPG00000008780	SRP54	100	62.449	ENSDARG00000098367	srp54	94	62.449	Danio_rerio
ENSCAPG00000008780	SRP54	100	64.286	ENSDNOG00000032525	SRP54	94	64.286	Dasypus_novemcinctus
ENSCAPG00000008780	SRP54	85	62.791	ENSDORG00000005159	-	83	62.791	Dipodomys_ordii
ENSCAPG00000008780	SRP54	100	51.935	FBgn0010747	Srp54k	93	51.935	Drosophila_melanogaster
ENSCAPG00000008780	SRP54	81	43.869	ENSETEG00000012102	-	89	43.869	Echinops_telfairi
ENSCAPG00000008780	SRP54	100	63.061	ENSETEG00000016307	-	94	63.061	Echinops_telfairi
ENSCAPG00000008780	SRP54	100	56.883	ENSEBUG00000009437	-	94	56.883	Eptatretus_burgeri
ENSCAPG00000008780	SRP54	100	64.286	ENSEASG00005002057	SRP54	94	64.286	Equus_asinus_asinus
ENSCAPG00000008780	SRP54	100	64.286	ENSECAG00000018042	SRP54	93	64.286	Equus_caballus
ENSCAPG00000008780	SRP54	80	67.453	ENSEEUG00000001511	SRP54	79	67.453	Erinaceus_europaeus
ENSCAPG00000008780	SRP54	100	61.633	ENSELUG00000003395	srp54	94	61.633	Esox_lucius
ENSCAPG00000008780	SRP54	100	64.082	ENSFCAG00000032033	SRP54	94	64.082	Felis_catus
ENSCAPG00000008780	SRP54	100	63.469	ENSFALG00000005995	SRP54	94	63.469	Ficedula_albicollis
ENSCAPG00000008780	SRP54	100	64.286	ENSFDAG00000016767	SRP54	95	64.286	Fukomys_damarensis
ENSCAPG00000008780	SRP54	100	61.224	ENSFHEG00000004263	srp54	94	61.224	Fundulus_heteroclitus
ENSCAPG00000008780	SRP54	94	63.557	ENSGMOG00000011391	srp54	94	63.557	Gadus_morhua
ENSCAPG00000008780	SRP54	100	63.469	ENSGALG00000023135	SRP54	94	63.469	Gallus_gallus
ENSCAPG00000008780	SRP54	100	61.837	ENSGAFG00000011586	srp54	94	61.837	Gambusia_affinis
ENSCAPG00000008780	SRP54	100	62.041	ENSGACG00000004181	srp54	94	62.041	Gasterosteus_aculeatus
ENSCAPG00000008780	SRP54	100	63.673	ENSGAGG00000014766	SRP54	94	63.673	Gopherus_agassizii
ENSCAPG00000008780	SRP54	100	64.286	ENSGGOG00000002926	SRP54	87	91.304	Gorilla_gorilla
ENSCAPG00000008780	SRP54	100	61.837	ENSHBUG00000005678	srp54	94	61.837	Haplochromis_burtoni
ENSCAPG00000008780	SRP54	100	64.286	ENSHGLG00000002850	SRP54	94	64.286	Heterocephalus_glaber_female
ENSCAPG00000008780	SRP54	100	64.286	ENSHGLG00100005263	SRP54	94	64.286	Heterocephalus_glaber_male
ENSCAPG00000008780	SRP54	100	46.104	ENSHGLG00100007281	-	93	46.104	Heterocephalus_glaber_male
ENSCAPG00000008780	SRP54	100	60.816	ENSHCOG00000021127	srp54	94	60.816	Hippocampus_comes
ENSCAPG00000008780	SRP54	100	62.041	ENSIPUG00000001420	srp54	94	62.041	Ictalurus_punctatus
ENSCAPG00000008780	SRP54	100	64.286	ENSSTOG00000016023	SRP54	94	64.286	Ictidomys_tridecemlineatus
ENSCAPG00000008780	SRP54	85	53.747	ENSJJAG00000016404	-	86	53.747	Jaculus_jaculus
ENSCAPG00000008780	SRP54	100	61.378	ENSJJAG00000013417	-	94	61.378	Jaculus_jaculus
ENSCAPG00000008780	SRP54	100	61.224	ENSKMAG00000007707	srp54	94	61.224	Kryptolebias_marmoratus
ENSCAPG00000008780	SRP54	100	61.633	ENSLBEG00000018690	srp54	94	61.633	Labrus_bergylta
ENSCAPG00000008780	SRP54	100	61.633	ENSLBEG00000021122	srp54	94	61.633	Labrus_bergylta
ENSCAPG00000008780	SRP54	100	62.245	ENSLACG00000017890	SRP54	94	62.245	Latimeria_chalumnae
ENSCAPG00000008780	SRP54	100	63.061	ENSLOCG00000009440	srp54	94	63.061	Lepisosteus_oculatus
ENSCAPG00000008780	SRP54	100	64.286	ENSLAFG00000012007	SRP54	94	64.286	Loxodonta_africana
ENSCAPG00000008780	SRP54	100	64.286	ENSMFAG00000044371	SRP54	87	91.304	Macaca_fascicularis
ENSCAPG00000008780	SRP54	100	64.286	ENSMMUG00000015073	FAM177A1	87	91.304	Macaca_mulatta
ENSCAPG00000008780	SRP54	100	64.286	ENSMNEG00000006947	SRP54	87	91.304	Macaca_nemestrina
ENSCAPG00000008780	SRP54	100	64.286	ENSMLEG00000042251	SRP54	87	91.304	Mandrillus_leucophaeus
ENSCAPG00000008780	SRP54	100	61.837	ENSMAMG00000004803	srp54	94	61.837	Mastacembelus_armatus
ENSCAPG00000008780	SRP54	100	61.837	ENSMZEG00005027528	srp54	94	61.837	Maylandia_zebra
ENSCAPG00000008780	SRP54	100	61.789	ENSMGAG00000012481	SRP54	94	61.789	Meleagris_gallopavo
ENSCAPG00000008780	SRP54	100	64.286	ENSMAUG00000014447	-	94	64.286	Mesocricetus_auratus
ENSCAPG00000008780	SRP54	100	64.286	ENSMICG00000010270	SRP54	94	64.286	Microcebus_murinus
ENSCAPG00000008780	SRP54	85	61.728	ENSMOCG00000000948	-	88	61.728	Microtus_ochrogaster
ENSCAPG00000008780	SRP54	84	66.334	ENSMMOG00000020303	srp54	84	66.334	Mola_mola
ENSCAPG00000008780	SRP54	100	64.286	ENSMODG00000012925	-	94	64.286	Monodelphis_domestica
ENSCAPG00000008780	SRP54	100	64.286	ENSMODG00000023150	-	94	64.286	Monodelphis_domestica
ENSCAPG00000008780	SRP54	84	66.085	ENSMALG00000009163	srp54	85	66.085	Monopterus_albus
ENSCAPG00000008780	SRP54	100	64.286	MGP_CAROLIEiJ_G0017754	-	94	64.286	Mus_caroli
ENSCAPG00000008780	SRP54	100	64.286	ENSMUSG00000073079	Srp54a	100	70.000	Mus_musculus
ENSCAPG00000008780	SRP54	100	64.286	ENSMUSG00000112449	Srp54b	64	100.000	Mus_musculus
ENSCAPG00000008780	SRP54	100	63.878	ENSMUSG00000079108	Srp54c	94	63.878	Mus_musculus
ENSCAPG00000008780	SRP54	100	64.286	MGP_PahariEiJ_G0029510	-	94	64.286	Mus_pahari
ENSCAPG00000008780	SRP54	100	64.286	ENSMPUG00000016302	SRP54	94	64.286	Mustela_putorius_furo
ENSCAPG00000008780	SRP54	100	64.286	ENSMLUG00000008958	SRP54	94	64.286	Myotis_lucifugus
ENSCAPG00000008780	SRP54	80	73.664	ENSNGAG00000019806	-	87	73.664	Nannospalax_galili
ENSCAPG00000008780	SRP54	85	58.519	ENSNBRG00000006000	srp54	88	58.519	Neolamprologus_brichardi
ENSCAPG00000008780	SRP54	100	64.286	ENSNLEG00000003496	SRP54	87	91.304	Nomascus_leucogenys
ENSCAPG00000008780	SRP54	65	100.000	ENSMEUG00000000138	-	63	100.000	Notamacropus_eugenii
ENSCAPG00000008780	SRP54	54	100.000	ENSOPRG00000014502	-	53	100.000	Ochotona_princeps
ENSCAPG00000008780	SRP54	100	64.286	ENSODEG00000004865	SRP54	94	64.286	Octodon_degus
ENSCAPG00000008780	SRP54	100	61.837	ENSONIG00000011768	srp54	94	61.837	Oreochromis_niloticus
ENSCAPG00000008780	SRP54	100	64.286	ENSOANG00000014051	SRP54	94	64.286	Ornithorhynchus_anatinus
ENSCAPG00000008780	SRP54	100	63.673	ENSOCUG00000007838	SRP54	94	63.673	Oryctolagus_cuniculus
ENSCAPG00000008780	SRP54	100	61.633	ENSORLG00000010027	srp54	94	61.633	Oryzias_latipes
ENSCAPG00000008780	SRP54	100	61.633	ENSORLG00020001878	srp54	94	61.633	Oryzias_latipes_hni
ENSCAPG00000008780	SRP54	100	61.633	ENSORLG00015021866	srp54	94	61.633	Oryzias_latipes_hsok
ENSCAPG00000008780	SRP54	100	61.429	ENSOMEG00000020952	srp54	94	61.429	Oryzias_melastigma
ENSCAPG00000008780	SRP54	100	64.286	ENSOGAG00000012188	SRP54	94	64.286	Otolemur_garnettii
ENSCAPG00000008780	SRP54	100	64.286	ENSOARG00000007160	SRP54	94	64.286	Ovis_aries
ENSCAPG00000008780	SRP54	100	64.894	ENSPPAG00000017434	SRP54	87	91.304	Pan_paniscus
ENSCAPG00000008780	SRP54	100	63.655	ENSPPRG00000014047	SRP54	77	100.000	Panthera_pardus
ENSCAPG00000008780	SRP54	100	64.082	ENSPTIG00000000744	SRP54	90	64.082	Panthera_tigris_altaica
ENSCAPG00000008780	SRP54	100	64.894	ENSPTRG00000006259	FAM177A1	87	91.304	Pan_troglodytes
ENSCAPG00000008780	SRP54	100	64.286	ENSPANG00000023853	SRP54	87	91.304	Papio_anubis
ENSCAPG00000008780	SRP54	100	61.837	ENSPKIG00000001953	srp54	94	61.837	Paramormyrops_kingsleyae
ENSCAPG00000008780	SRP54	100	63.469	ENSPSIG00000006476	SRP54	94	63.469	Pelodiscus_sinensis
ENSCAPG00000008780	SRP54	84	66.500	ENSPMGG00000004127	srp54	83	66.500	Periophthalmus_magnuspinnatus
ENSCAPG00000008780	SRP54	100	57.050	ENSPEMG00000019634	-	91	60.870	Peromyscus_maniculatus_bairdii
ENSCAPG00000008780	SRP54	100	58.571	ENSPMAG00000006078	-	94	58.571	Petromyzon_marinus
ENSCAPG00000008780	SRP54	100	64.286	ENSPCIG00000016175	SRP54	94	64.286	Phascolarctos_cinereus
ENSCAPG00000008780	SRP54	100	61.837	ENSPFOG00000008870	srp54	94	61.837	Poecilia_formosa
ENSCAPG00000008780	SRP54	100	61.837	ENSPLAG00000009889	srp54	94	61.837	Poecilia_latipinna
ENSCAPG00000008780	SRP54	100	61.837	ENSPMEG00000008601	srp54	94	61.837	Poecilia_mexicana
ENSCAPG00000008780	SRP54	100	61.837	ENSPREG00000004505	srp54	94	61.837	Poecilia_reticulata
ENSCAPG00000008780	SRP54	100	62.857	ENSPPYG00000005739	SRP54	94	62.857	Pongo_abelii
ENSCAPG00000008780	SRP54	100	60.408	ENSPCAG00000006268	SRP54	94	60.408	Procavia_capensis
ENSCAPG00000008780	SRP54	100	63.747	ENSPCOG00000022473	SRP54	94	63.747	Propithecus_coquereli
ENSCAPG00000008780	SRP54	67	100.000	ENSPVAG00000010056	SRP54	75	100.000	Pteropus_vampyrus
ENSCAPG00000008780	SRP54	100	61.837	ENSPNYG00000009717	srp54	94	61.837	Pundamilia_nyererei
ENSCAPG00000008780	SRP54	100	62.041	ENSPNAG00000008544	srp54	94	62.041	Pygocentrus_nattereri
ENSCAPG00000008780	SRP54	100	64.286	ENSRNOG00000032776	Srp54a	94	64.286	Rattus_norvegicus
ENSCAPG00000008780	SRP54	100	64.286	ENSRROG00000041292	SRP54	87	91.304	Rhinopithecus_roxellana
ENSCAPG00000008780	SRP54	84	36.855	YPR088C	SRP54	72	37.129	Saccharomyces_cerevisiae
ENSCAPG00000008780	SRP54	95	61.752	ENSSBOG00000035145	SRP54	94	61.957	Saimiri_boliviensis_boliviensis
ENSCAPG00000008780	SRP54	68	67.378	ENSSHAG00000000671	SRP54	91	67.378	Sarcophilus_harrisii
ENSCAPG00000008780	SRP54	100	62.041	ENSSFOG00015013920	srp54	94	62.041	Scleropages_formosus
ENSCAPG00000008780	SRP54	100	61.020	ENSSMAG00000002441	srp54	89	61.020	Scophthalmus_maximus
ENSCAPG00000008780	SRP54	100	61.429	ENSSDUG00000018586	srp54	94	61.429	Seriola_dumerili
ENSCAPG00000008780	SRP54	100	61.224	ENSSLDG00000010476	srp54	94	61.224	Seriola_lalandi_dorsalis
ENSCAPG00000008780	SRP54	100	64.286	ENSSARG00000002744	SRP54	94	64.286	Sorex_araneus
ENSCAPG00000008780	SRP54	100	63.673	ENSSPUG00000013101	SRP54	94	63.673	Sphenodon_punctatus
ENSCAPG00000008780	SRP54	100	61.633	ENSSPAG00000002354	srp54	94	61.633	Stegastes_partitus
ENSCAPG00000008780	SRP54	100	64.286	ENSSSCG00000001955	SRP54	94	64.286	Sus_scrofa
ENSCAPG00000008780	SRP54	100	63.469	ENSTGUG00000011945	-	95	63.469	Taeniopygia_guttata
ENSCAPG00000008780	SRP54	100	61.020	ENSTRUG00000007057	srp54	94	61.020	Takifugu_rubripes
ENSCAPG00000008780	SRP54	100	61.020	ENSTNIG00000002589	srp54	94	61.020	Tetraodon_nigroviridis
ENSCAPG00000008780	SRP54	73	100.000	ENSTBEG00000011409	SRP54	72	100.000	Tupaia_belangeri
ENSCAPG00000008780	SRP54	80	73.664	ENSTTRG00000000928	SRP54	79	73.664	Tursiops_truncatus
ENSCAPG00000008780	SRP54	59	61.871	ENSUAMG00000012385	SRP54	100	61.871	Ursus_americanus
ENSCAPG00000008780	SRP54	100	64.286	ENSUMAG00000011234	SRP54	94	64.286	Ursus_maritimus
ENSCAPG00000008780	SRP54	100	64.082	ENSVPAG00000005668	SRP54	100	64.082	Vicugna_pacos
ENSCAPG00000008780	SRP54	100	64.286	ENSVVUG00000019962	SRP54	94	64.286	Vulpes_vulpes
ENSCAPG00000008780	SRP54	100	47.610	ENSXETG00000012290	srp54	94	49.390	Xenopus_tropicalis
ENSCAPG00000008780	SRP54	84	66.584	ENSXCOG00000004658	srp54	84	66.584	Xiphophorus_couchianus
ENSCAPG00000008780	SRP54	100	61.837	ENSXMAG00000018315	srp54	94	61.837	Xiphophorus_maculatus