EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008827 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 30781 bases
Position: chrAVPZ01000789.1:6525601-6556381
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006747	DUF1604	PF07713.13	1.3e-35	1	1
ENSCAPP00000006747	G-patch	PF01585.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010430	GPATCH1-201	2685	-	ENSCAPP00000006747	894 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008827	GPATCH1	100	79.341	ENSG00000076650	GPATCH1	97	78.901	Homo_sapiens
ENSCAPG00000008827	GPATCH1	100	80.220	ENSAMEG00000015575	GPATCH1	97	79.428	Ailuropoda_melanoleuca
ENSCAPG00000008827	GPATCH1	79	67.097	ENSAOCG00000006668	gpatch1	70	67.097	Amphiprion_ocellaris
ENSCAPG00000008827	GPATCH1	81	51.941	ENSAPEG00000000026	gpatch1	77	52.209	Amphiprion_percula
ENSCAPG00000008827	GPATCH1	81	50.710	ENSATEG00000014494	gpatch1	97	46.555	Anabas_testudineus
ENSCAPG00000008827	GPATCH1	93	59.040	ENSAPLG00000007584	GPATCH1	98	58.269	Anas_platyrhynchos
ENSCAPG00000008827	GPATCH1	100	77.363	ENSANAG00000027002	GPATCH1	97	79.231	Aotus_nancymaae
ENSCAPG00000008827	GPATCH1	81	51.047	ENSACLG00000024740	gpatch1	76	50.847	Astatotilapia_calliptera
ENSCAPG00000008827	GPATCH1	90	50.227	ENSAMXG00000020177	gpatch1	83	52.564	Astyanax_mexicanus
ENSCAPG00000008827	GPATCH1	91	79.419	ENSBTAG00000000721	GPATCH1	97	78.721	Bos_taurus
ENSCAPG00000008827	GPATCH1	100	77.033	ENSCJAG00000000684	GPATCH1	97	78.901	Callithrix_jacchus
ENSCAPG00000008827	GPATCH1	100	79.473	ENSCAFG00000007457	GPATCH1	81	78.462	Canis_familiaris
ENSCAPG00000008827	GPATCH1	93	79.695	ENSCAFG00020019731	GPATCH1	88	78.986	Canis_lupus_dingo
ENSCAPG00000008827	GPATCH1	99	79.911	ENSCHIG00000019626	GPATCH1	97	79.185	Capra_hircus
ENSCAPG00000008827	GPATCH1	100	94.493	ENSCPOG00000024477	GPATCH1	100	97.892	Cavia_porcellus
ENSCAPG00000008827	GPATCH1	100	75.604	ENSCCAG00000024676	GPATCH1	97	79.121	Cebus_capucinus
ENSCAPG00000008827	GPATCH1	100	79.231	ENSCATG00000043637	GPATCH1	97	78.681	Cercocebus_atys
ENSCAPG00000008827	GPATCH1	99	85.906	ENSCLAG00000003395	-	100	85.906	Chinchilla_lanigera
ENSCAPG00000008827	GPATCH1	100	76.948	ENSCSAG00000004743	GPATCH1	97	76.509	Chlorocebus_sabaeus
ENSCAPG00000008827	GPATCH1	96	68.657	ENSCHOG00000012865	GPATCH1	100	68.312	Choloepus_hoffmanni
ENSCAPG00000008827	GPATCH1	81	65.348	ENSCPBG00000000666	GPATCH1	92	65.348	Chrysemys_picta_bellii
ENSCAPG00000008827	GPATCH1	68	36.201	ENSCING00000012518	-	80	34.516	Ciona_intestinalis
ENSCAPG00000008827	GPATCH1	86	84.450	ENSCANG00000012540	GPATCH1	97	84.450	Colobus_angolensis_palliatus
ENSCAPG00000008827	GPATCH1	100	77.426	ENSCGRG00001016736	Gpatch1	100	77.669	Cricetulus_griseus_chok1gshd
ENSCAPG00000008827	GPATCH1	96	63.667	ENSCGRG00000005069	Gpatch1	90	63.475	Cricetulus_griseus_crigri
ENSCAPG00000008827	GPATCH1	81	45.934	ENSCSEG00000019456	-	63	64.198	Cynoglossus_semilaevis
ENSCAPG00000008827	GPATCH1	90	47.964	ENSDARG00000033418	gpatch1	78	51.697	Danio_rerio
ENSCAPG00000008827	GPATCH1	91	78.744	ENSDNOG00000005291	GPATCH1	92	77.657	Dasypus_novemcinctus
ENSCAPG00000008827	GPATCH1	93	73.641	ENSDORG00000012546	Gpatch1	91	73.058	Dipodomys_ordii
ENSCAPG00000008827	GPATCH1	69	32.838	FBgn0036386	CG8833	64	33.184	Drosophila_melanogaster
ENSCAPG00000008827	GPATCH1	99	70.210	ENSETEG00000003626	GPATCH1	81	80.417	Echinops_telfairi
ENSCAPG00000008827	GPATCH1	94	36.517	ENSEBUG00000011286	gpatch1	89	36.585	Eptatretus_burgeri
ENSCAPG00000008827	GPATCH1	90	80.073	ENSEASG00005021162	GPATCH1	89	80.466	Equus_asinus_asinus
ENSCAPG00000008827	GPATCH1	93	79.671	ENSECAG00000022743	GPATCH1	85	79.323	Equus_caballus
ENSCAPG00000008827	GPATCH1	66	95.868	ENSEEUG00000012925	GPATCH1	64	95.868	Erinaceus_europaeus
ENSCAPG00000008827	GPATCH1	99	47.374	ENSELUG00000018195	gpatch1	88	48.212	Esox_lucius
ENSCAPG00000008827	GPATCH1	100	78.658	ENSFCAG00000014917	GPATCH1	97	78.108	Felis_catus
ENSCAPG00000008827	GPATCH1	99	58.565	ENSFALG00000007821	GPATCH1	86	59.662	Ficedula_albicollis
ENSCAPG00000008827	GPATCH1	99	82.022	ENSFDAG00000003871	GPATCH1	99	81.236	Fukomys_damarensis
ENSCAPG00000008827	GPATCH1	75	51.621	ENSGMOG00000003830	gpatch1	84	51.621	Gadus_morhua
ENSCAPG00000008827	GPATCH1	92	59.907	ENSGALG00000004839	GPATCH1	90	60.990	Gallus_gallus
ENSCAPG00000008827	GPATCH1	81	50.134	ENSGACG00000017544	gpatch1	81	49.866	Gasterosteus_aculeatus
ENSCAPG00000008827	GPATCH1	100	60.803	ENSGAGG00000010067	GPATCH1	97	61.021	Gopherus_agassizii
ENSCAPG00000008827	GPATCH1	100	79.451	ENSGGOG00000010862	GPATCH1	99	79.011	Gorilla_gorilla
ENSCAPG00000008827	GPATCH1	81	51.053	ENSHBUG00000023462	gpatch1	77	51.316	Haplochromis_burtoni
ENSCAPG00000008827	GPATCH1	100	82.728	ENSHGLG00000009334	GPATCH1	97	81.958	Heterocephalus_glaber_female
ENSCAPG00000008827	GPATCH1	100	82.838	ENSHGLG00100018074	GPATCH1	100	79.299	Heterocephalus_glaber_male
ENSCAPG00000008827	GPATCH1	81	52.549	ENSIPUG00000014977	gpatch1	87	49.767	Ictalurus_punctatus
ENSCAPG00000008827	GPATCH1	100	80.748	ENSSTOG00000003720	GPATCH1	97	79.956	Ictidomys_tridecemlineatus
ENSCAPG00000008827	GPATCH1	91	77.939	ENSJJAG00000023765	Gpatch1	97	77.680	Jaculus_jaculus
ENSCAPG00000008827	GPATCH1	89	48.810	ENSKMAG00000017950	gpatch1	87	49.462	Kryptolebias_marmoratus
ENSCAPG00000008827	GPATCH1	81	51.488	ENSLBEG00000026527	gpatch1	76	52.140	Labrus_bergylta
ENSCAPG00000008827	GPATCH1	89	56.204	ENSLACG00000008130	GPATCH1	89	55.676	Latimeria_chalumnae
ENSCAPG00000008827	GPATCH1	81	55.570	ENSLOCG00000001800	gpatch1	78	55.751	Lepisosteus_oculatus
ENSCAPG00000008827	GPATCH1	99	79.018	ENSLAFG00000013589	GPATCH1	97	78.218	Loxodonta_africana
ENSCAPG00000008827	GPATCH1	90	79.927	ENSMFAG00000034418	GPATCH1	92	79.440	Macaca_fascicularis
ENSCAPG00000008827	GPATCH1	100	79.254	ENSMMUG00000011790	GPATCH1	97	78.814	Macaca_mulatta
ENSCAPG00000008827	GPATCH1	100	79.121	ENSMNEG00000045084	GPATCH1	99	78.681	Macaca_nemestrina
ENSCAPG00000008827	GPATCH1	96	71.936	ENSMLEG00000043840	GPATCH1	97	71.478	Mandrillus_leucophaeus
ENSCAPG00000008827	GPATCH1	81	51.047	ENSMZEG00005001926	gpatch1	77	50.847	Maylandia_zebra
ENSCAPG00000008827	GPATCH1	91	60.864	ENSMGAG00000005775	GPATCH1	87	61.267	Meleagris_gallopavo
ENSCAPG00000008827	GPATCH1	90	71.324	ENSMICG00000004829	GPATCH1	90	70.652	Microcebus_murinus
ENSCAPG00000008827	GPATCH1	99	78.295	ENSMOCG00000000174	Gpatch1	89	78.890	Microtus_ochrogaster
ENSCAPG00000008827	GPATCH1	91	68.231	ENSMODG00000012226	GPATCH1	97	67.896	Monodelphis_domestica
ENSCAPG00000008827	GPATCH1	99	45.851	ENSMALG00000014386	gpatch1	88	47.597	Monopterus_albus
ENSCAPG00000008827	GPATCH1	100	78.251	ENSMUSG00000063808	Gpatch1	97	79.162	Mus_musculus
ENSCAPG00000008827	GPATCH1	100	77.754	MGP_PahariEiJ_G0012816	Gpatch1	97	77.888	Mus_pahari
ENSCAPG00000008827	GPATCH1	100	77.426	MGP_SPRETEiJ_G0030681	Gpatch1	97	78.548	Mus_spretus
ENSCAPG00000008827	GPATCH1	100	79.121	ENSMPUG00000007658	GPATCH1	97	78.548	Mustela_putorius_furo
ENSCAPG00000008827	GPATCH1	100	79.493	ENSMLUG00000012161	GPATCH1	97	78.942	Myotis_lucifugus
ENSCAPG00000008827	GPATCH1	100	78.084	ENSNGAG00000012455	Gpatch1	97	76.249	Nannospalax_galili
ENSCAPG00000008827	GPATCH1	100	79.451	ENSNLEG00000007659	GPATCH1	97	78.901	Nomascus_leucogenys
ENSCAPG00000008827	GPATCH1	72	69.325	ENSMEUG00000015174	GPATCH1	69	69.172	Notamacropus_eugenii
ENSCAPG00000008827	GPATCH1	99	84.479	ENSODEG00000007103	GPATCH1	97	83.925	Octodon_degus
ENSCAPG00000008827	GPATCH1	89	50.121	ENSONIG00000003302	gpatch1	88	49.879	Oreochromis_niloticus
ENSCAPG00000008827	GPATCH1	99	65.714	ENSOANG00000012732	GPATCH1	97	65.461	Ornithorhynchus_anatinus
ENSCAPG00000008827	GPATCH1	100	78.775	ENSOCUG00000015905	GPATCH1	97	78.965	Oryctolagus_cuniculus
ENSCAPG00000008827	GPATCH1	89	48.422	ENSORLG00000018706	gpatch1	77	50.268	Oryzias_latipes
ENSCAPG00000008827	GPATCH1	89	47.670	ENSOMEG00000022688	gpatch1	87	48.452	Oryzias_melastigma
ENSCAPG00000008827	GPATCH1	84	81.307	ENSOGAG00000004016	GPATCH1	92	82.609	Otolemur_garnettii
ENSCAPG00000008827	GPATCH1	91	79.686	ENSOARG00000004365	GPATCH1	97	78.855	Ovis_aries
ENSCAPG00000008827	GPATCH1	100	79.341	ENSPPAG00000020990	GPATCH1	97	78.901	Pan_paniscus
ENSCAPG00000008827	GPATCH1	100	78.768	ENSPPRG00000017245	GPATCH1	97	78.218	Panthera_pardus
ENSCAPG00000008827	GPATCH1	100	79.428	ENSPTIG00000019649	GPATCH1	97	78.878	Panthera_tigris_altaica
ENSCAPG00000008827	GPATCH1	100	79.121	ENSPTRG00000010803	GPATCH1	97	78.681	Pan_troglodytes
ENSCAPG00000008827	GPATCH1	91	79.710	ENSPANG00000012374	GPATCH1	92	78.986	Papio_anubis
ENSCAPG00000008827	GPATCH1	81	54.593	ENSPKIG00000020745	gpatch1	75	54.809	Paramormyrops_kingsleyae
ENSCAPG00000008827	GPATCH1	100	58.198	ENSPSIG00000013433	GPATCH1	97	58.033	Pelodiscus_sinensis
ENSCAPG00000008827	GPATCH1	100	76.432	ENSPEMG00000000636	Gpatch1	97	76.652	Peromyscus_maniculatus_bairdii
ENSCAPG00000008827	GPATCH1	91	69.976	ENSPCIG00000021003	GPATCH1	94	69.830	Phascolarctos_cinereus
ENSCAPG00000008827	GPATCH1	70	47.962	ENSPREG00000008264	gpatch1	75	47.867	Poecilia_reticulata
ENSCAPG00000008827	GPATCH1	100	76.593	ENSPPYG00000009824	GPATCH1	97	76.044	Pongo_abelii
ENSCAPG00000008827	GPATCH1	78	75.265	ENSPCAG00000005931	GPATCH1	85	75.850	Procavia_capensis
ENSCAPG00000008827	GPATCH1	92	74.377	ENSPCOG00000009674	GPATCH1	92	75.092	Propithecus_coquereli
ENSCAPG00000008827	GPATCH1	81	82.703	ENSPVAG00000017767	GPATCH1	86	82.703	Pteropus_vampyrus
ENSCAPG00000008827	GPATCH1	81	51.387	ENSPNYG00000018189	gpatch1	85	51.519	Pundamilia_nyererei
ENSCAPG00000008827	GPATCH1	81	52.381	ENSPNAG00000013187	gpatch1	79	52.510	Pygocentrus_nattereri
ENSCAPG00000008827	GPATCH1	100	78.170	ENSRNOG00000011584	Gpatch1	97	78.390	Rattus_norvegicus
ENSCAPG00000008827	GPATCH1	93	76.896	ENSRBIG00000034723	GPATCH1	93	73.341	Rhinopithecus_bieti
ENSCAPG00000008827	GPATCH1	100	79.341	ENSRROG00000024428	GPATCH1	97	78.901	Rhinopithecus_roxellana
ENSCAPG00000008827	GPATCH1	100	79.341	ENSSBOG00000034650	GPATCH1	97	78.901	Saimiri_boliviensis_boliviensis
ENSCAPG00000008827	GPATCH1	99	68.277	ENSSHAG00000016016	GPATCH1	96	69.332	Sarcophilus_harrisii
ENSCAPG00000008827	GPATCH1	89	51.830	ENSSFOG00015011535	gpatch1	86	52.593	Scleropages_formosus
ENSCAPG00000008827	GPATCH1	99	43.952	ENSSMAG00000002883	gpatch1	90	45.928	Scophthalmus_maximus
ENSCAPG00000008827	GPATCH1	81	50.648	ENSSDUG00000007444	gpatch1	87	47.483	Seriola_dumerili
ENSCAPG00000008827	GPATCH1	81	50.258	ENSSLDG00000002856	gpatch1	86	50.257	Seriola_lalandi_dorsalis
ENSCAPG00000008827	GPATCH1	72	82.689	ENSSARG00000004108	GPATCH1	69	82.689	Sorex_araneus
ENSCAPG00000008827	GPATCH1	91	80.266	ENSSSCG00000002865	GPATCH1	91	79.758	Sus_scrofa
ENSCAPG00000008827	GPATCH1	99	60.133	ENSTGUG00000009401	GPATCH1	89	59.976	Taeniopygia_guttata
ENSCAPG00000008827	GPATCH1	81	50.337	ENSTRUG00000005785	-	78	50.000	Takifugu_rubripes
ENSCAPG00000008827	GPATCH1	81	50.337	ENSTRUG00000025081	gpatch1	78	49.731	Takifugu_rubripes
ENSCAPG00000008827	GPATCH1	81	51.471	ENSTNIG00000002554	gpatch1	93	51.535	Tetraodon_nigroviridis
ENSCAPG00000008827	GPATCH1	64	73.750	ENSTBEG00000007750	-	81	73.750	Tupaia_belangeri
ENSCAPG00000008827	GPATCH1	91	71.807	ENSTTRG00000012221	GPATCH1	97	71.789	Tursiops_truncatus
ENSCAPG00000008827	GPATCH1	93	78.842	ENSUMAG00000014645	GPATCH1	100	77.988	Ursus_maritimus
ENSCAPG00000008827	GPATCH1	79	94.483	ENSVPAG00000010313	GPATCH1	82	94.805	Vicugna_pacos
ENSCAPG00000008827	GPATCH1	93	79.695	ENSVVUG00000016572	GPATCH1	88	78.986	Vulpes_vulpes
ENSCAPG00000008827	GPATCH1	98	48.850	ENSXETG00000018276	gpatch1	96	47.965	Xenopus_tropicalis