EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008935 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 13479 bases
Position: chrAVPZ01000933.1:5756566-5770044
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006869	PRP4	PF08799.11	2.4e-14	1	1
ENSCAPP00000006871	PRP4	PF08799.11	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010555	PRPF4-202	1356	-	ENSCAPP00000006871	451 (aa)	-	-
ENSCAPT00000010553	PRPF4-201	1272	-	ENSCAPP00000006869	423 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008935	PRPF4	97	88.305	ENSG00000136875	PRPF4	88	88.305	Homo_sapiens
ENSCAPG00000008935	PRPF4	97	69.212	ENSAPOG00000014132	prpf4	85	69.212	Acanthochromis_polyacanthus
ENSCAPG00000008935	PRPF4	97	88.544	ENSAMEG00000013048	PRPF4	86	88.544	Ailuropoda_melanoleuca
ENSCAPG00000008935	PRPF4	97	69.928	ENSACIG00000005579	prpf4	90	69.928	Amphilophus_citrinellus
ENSCAPG00000008935	PRPF4	97	68.974	ENSAOCG00000005457	prpf4	90	68.974	Amphiprion_ocellaris
ENSCAPG00000008935	PRPF4	97	68.735	ENSAPEG00000000776	prpf4	90	68.735	Amphiprion_percula
ENSCAPG00000008935	PRPF4	97	68.735	ENSATEG00000023013	prpf4	90	68.735	Anabas_testudineus
ENSCAPG00000008935	PRPF4	97	82.339	ENSAPLG00000006534	PRPF4	76	83.698	Anas_platyrhynchos
ENSCAPG00000008935	PRPF4	97	82.898	ENSACAG00000015110	PRPF4	80	82.898	Anolis_carolinensis
ENSCAPG00000008935	PRPF4	97	88.544	ENSANAG00000022464	PRPF4	85	88.544	Aotus_nancymaae
ENSCAPG00000008935	PRPF4	97	69.212	ENSACLG00000019031	prpf4	90	69.212	Astatotilapia_calliptera
ENSCAPG00000008935	PRPF4	92	58.765	ENSAMXG00000006756	prpf4	79	65.693	Astyanax_mexicanus
ENSCAPG00000008935	PRPF4	97	88.067	ENSBTAG00000004571	PRPF4	88	88.067	Bos_taurus
ENSCAPG00000008935	PRPF4	91	43.367	WBGene00007972	prp-4	91	43.478	Caenorhabditis_elegans
ENSCAPG00000008935	PRPF4	97	88.544	ENSCJAG00000017856	PRPF4	88	88.544	Callithrix_jacchus
ENSCAPG00000008935	PRPF4	97	88.544	ENSCAFG00000003224	PRPF4	84	89.781	Canis_familiaris
ENSCAPG00000008935	PRPF4	97	88.544	ENSCAFG00020022637	PRPF4	87	89.781	Canis_lupus_dingo
ENSCAPG00000008935	PRPF4	97	88.783	ENSCHIG00000024648	-	88	88.783	Capra_hircus
ENSCAPG00000008935	PRPF4	97	88.544	ENSTSYG00000010366	PRPF4	88	88.544	Carlito_syrichta
ENSCAPG00000008935	PRPF4	97	84.487	ENSCPOG00000014729	-	81	84.487	Cavia_porcellus
ENSCAPG00000008935	PRPF4	97	88.544	ENSCPOG00000010747	-	88	88.544	Cavia_porcellus
ENSCAPG00000008935	PRPF4	97	88.783	ENSCCAG00000028990	PRPF4	88	88.783	Cebus_capucinus
ENSCAPG00000008935	PRPF4	97	88.544	ENSCATG00000021552	PRPF4	88	88.544	Cercocebus_atys
ENSCAPG00000008935	PRPF4	97	88.783	ENSCLAG00000013448	PRPF4	88	88.783	Chinchilla_lanigera
ENSCAPG00000008935	PRPF4	95	86.098	ENSCHOG00000007233	PRPF4	99	86.098	Choloepus_hoffmanni
ENSCAPG00000008935	PRPF4	97	83.532	ENSCPBG00000019136	PRPF4	65	84.672	Chrysemys_picta_bellii
ENSCAPG00000008935	PRPF4	94	58.398	ENSCING00000001299	-	88	57.552	Ciona_intestinalis
ENSCAPG00000008935	PRPF4	94	54.815	ENSCSAVG00000009178	-	99	52.506	Ciona_savignyi
ENSCAPG00000008935	PRPF4	97	88.544	ENSCANG00000003246	PRPF4	88	88.544	Colobus_angolensis_palliatus
ENSCAPG00000008935	PRPF4	97	88.305	ENSCGRG00001016992	Prpf4	88	88.305	Cricetulus_griseus_chok1gshd
ENSCAPG00000008935	PRPF4	97	88.305	ENSCGRG00000017560	Prpf4	88	88.305	Cricetulus_griseus_crigri
ENSCAPG00000008935	PRPF4	95	69.268	ENSCSEG00000020451	prpf4	89	69.343	Cynoglossus_semilaevis
ENSCAPG00000008935	PRPF4	97	73.031	ENSDARG00000067639	prpf4	89	74.209	Danio_rerio
ENSCAPG00000008935	PRPF4	97	88.544	ENSDNOG00000013203	PRPF4	88	88.544	Dasypus_novemcinctus
ENSCAPG00000008935	PRPF4	97	88.067	ENSDORG00000026275	Prpf4	88	88.067	Dipodomys_ordii
ENSCAPG00000008935	PRPF4	91	54.430	FBgn0036733	U4-U6-60K	82	54.684	Drosophila_melanogaster
ENSCAPG00000008935	PRPF4	97	87.828	ENSETEG00000020389	PRPF4	88	87.828	Echinops_telfairi
ENSCAPG00000008935	PRPF4	90	71.134	ENSEBUG00000015229	prpf4	78	71.649	Eptatretus_burgeri
ENSCAPG00000008935	PRPF4	97	88.544	ENSEASG00005022678	PRPF4	88	88.544	Equus_asinus_asinus
ENSCAPG00000008935	PRPF4	97	88.544	ENSECAG00000007072	PRPF4	88	88.544	Equus_caballus
ENSCAPG00000008935	PRPF4	63	97.619	ENSEEUG00000007480	PRPF4	58	97.619	Erinaceus_europaeus
ENSCAPG00000008935	PRPF4	97	72.554	ENSELUG00000007510	prpf4	91	72.554	Esox_lucius
ENSCAPG00000008935	PRPF4	97	88.544	ENSFCAG00000005514	PRPF4	88	88.544	Felis_catus
ENSCAPG00000008935	PRPF4	92	84.131	ENSFALG00000005423	PRPF4	77	84.131	Ficedula_albicollis
ENSCAPG00000008935	PRPF4	97	88.544	ENSFDAG00000005839	PRPF4	88	88.544	Fukomys_damarensis
ENSCAPG00000008935	PRPF4	97	68.974	ENSFHEG00000001300	prpf4	90	68.974	Fundulus_heteroclitus
ENSCAPG00000008935	PRPF4	97	82.578	ENSGALG00000008857	PRPF4	76	83.942	Gallus_gallus
ENSCAPG00000008935	PRPF4	65	66.429	ENSGAFG00000012164	prpf4	56	68.015	Gambusia_affinis
ENSCAPG00000008935	PRPF4	97	60.808	ENSGACG00000015476	prpf4	91	59.857	Gasterosteus_aculeatus
ENSCAPG00000008935	PRPF4	97	83.055	ENSGAGG00000025029	PRPF4	85	83.055	Gopherus_agassizii
ENSCAPG00000008935	PRPF4	97	88.305	ENSGGOG00000006943	PRPF4	88	88.305	Gorilla_gorilla
ENSCAPG00000008935	PRPF4	97	69.212	ENSHBUG00000000562	prpf4	90	69.212	Haplochromis_burtoni
ENSCAPG00000008935	PRPF4	97	88.783	ENSHGLG00000015191	PRPF4	88	88.783	Heterocephalus_glaber_female
ENSCAPG00000008935	PRPF4	97	75.837	ENSHGLG00000016628	-	82	76.794	Heterocephalus_glaber_female
ENSCAPG00000008935	PRPF4	97	70.460	ENSHGLG00000003838	-	77	70.460	Heterocephalus_glaber_female
ENSCAPG00000008935	PRPF4	97	70.460	ENSHGLG00100005571	-	77	70.460	Heterocephalus_glaber_male
ENSCAPG00000008935	PRPF4	97	71.122	ENSIPUG00000017956	PRPF4	82	71.122	Ictalurus_punctatus
ENSCAPG00000008935	PRPF4	97	88.305	ENSSTOG00000027833	PRPF4	88	88.305	Ictidomys_tridecemlineatus
ENSCAPG00000008935	PRPF4	97	88.544	ENSJJAG00000008838	Prpf4	88	88.544	Jaculus_jaculus
ENSCAPG00000008935	PRPF4	97	68.974	ENSKMAG00000013236	prpf4	90	68.974	Kryptolebias_marmoratus
ENSCAPG00000008935	PRPF4	97	68.258	ENSLBEG00000020611	prpf4	89	69.343	Labrus_bergylta
ENSCAPG00000008935	PRPF4	97	77.197	ENSLACG00000016317	PRPF4	88	76.102	Latimeria_chalumnae
ENSCAPG00000008935	PRPF4	97	74.463	ENSLOCG00000000581	prpf4	82	74.463	Lepisosteus_oculatus
ENSCAPG00000008935	PRPF4	97	88.544	ENSLAFG00000018225	PRPF4	88	88.544	Loxodonta_africana
ENSCAPG00000008935	PRPF4	97	88.305	ENSMFAG00000039397	PRPF4	88	88.305	Macaca_fascicularis
ENSCAPG00000008935	PRPF4	97	88.544	ENSMMUG00000005844	PRPF4	88	88.544	Macaca_mulatta
ENSCAPG00000008935	PRPF4	97	76.190	ENSMNEG00000033737	PRPF4	78	76.190	Macaca_nemestrina
ENSCAPG00000008935	PRPF4	97	88.544	ENSMLEG00000040284	PRPF4	88	88.544	Mandrillus_leucophaeus
ENSCAPG00000008935	PRPF4	97	68.735	ENSMAMG00000020141	prpf4	90	68.735	Mastacembelus_armatus
ENSCAPG00000008935	PRPF4	97	69.212	ENSMZEG00005023205	prpf4	90	69.212	Maylandia_zebra
ENSCAPG00000008935	PRPF4	97	82.339	ENSMGAG00000001796	PRPF4	76	83.698	Meleagris_gallopavo
ENSCAPG00000008935	PRPF4	97	87.828	ENSMAUG00000018022	Prpf4	88	87.828	Mesocricetus_auratus
ENSCAPG00000008935	PRPF4	97	88.067	ENSMICG00000015022	PRPF4	88	88.067	Microcebus_murinus
ENSCAPG00000008935	PRPF4	97	88.305	ENSMOCG00000018273	Prpf4	88	88.305	Microtus_ochrogaster
ENSCAPG00000008935	PRPF4	97	67.064	ENSMMOG00000021177	prpf4	91	67.064	Mola_mola
ENSCAPG00000008935	PRPF4	97	86.635	ENSMODG00000004444	-	88	86.635	Monodelphis_domestica
ENSCAPG00000008935	PRPF4	97	86.396	ENSMODG00000025096	-	85	86.396	Monodelphis_domestica
ENSCAPG00000008935	PRPF4	97	68.974	ENSMALG00000013624	prpf4	90	68.974	Monopterus_albus
ENSCAPG00000008935	PRPF4	97	88.305	MGP_CAROLIEiJ_G0026078	Prpf4	88	88.305	Mus_caroli
ENSCAPG00000008935	PRPF4	97	88.305	ENSMUSG00000066148	Prpf4	88	88.305	Mus_musculus
ENSCAPG00000008935	PRPF4	97	88.067	MGP_PahariEiJ_G0028413	Prpf4	88	88.067	Mus_pahari
ENSCAPG00000008935	PRPF4	97	88.305	MGP_SPRETEiJ_G0027042	Prpf4	88	88.305	Mus_spretus
ENSCAPG00000008935	PRPF4	97	88.544	ENSMPUG00000007883	PRPF4	88	88.544	Mustela_putorius_furo
ENSCAPG00000008935	PRPF4	97	88.544	ENSMLUG00000015309	-	84	89.781	Myotis_lucifugus
ENSCAPG00000008935	PRPF4	97	87.351	ENSMLUG00000008626	-	86	87.351	Myotis_lucifugus
ENSCAPG00000008935	PRPF4	97	81.384	ENSNGAG00000000468	Prpf4	86	82.482	Nannospalax_galili
ENSCAPG00000008935	PRPF4	97	69.451	ENSNBRG00000007972	prpf4	90	69.451	Neolamprologus_brichardi
ENSCAPG00000008935	PRPF4	97	88.544	ENSNLEG00000016647	PRPF4	88	88.544	Nomascus_leucogenys
ENSCAPG00000008935	PRPF4	97	86.635	ENSMEUG00000013256	PRPF4	88	87.835	Notamacropus_eugenii
ENSCAPG00000008935	PRPF4	97	88.067	ENSOPRG00000005302	PRPF4	88	88.067	Ochotona_princeps
ENSCAPG00000008935	PRPF4	97	89.021	ENSODEG00000018147	PRPF4	88	89.021	Octodon_degus
ENSCAPG00000008935	PRPF4	97	69.212	ENSONIG00000012671	prpf4	90	69.212	Oreochromis_niloticus
ENSCAPG00000008935	PRPF4	97	88.305	ENSOCUG00000005046	PRPF4	88	88.305	Oryctolagus_cuniculus
ENSCAPG00000008935	PRPF4	97	67.780	ENSORLG00000019641	prpf4	91	67.780	Oryzias_latipes
ENSCAPG00000008935	PRPF4	97	67.780	ENSORLG00020019438	prpf4	91	67.780	Oryzias_latipes_hni
ENSCAPG00000008935	PRPF4	97	67.542	ENSOMEG00000020941	prpf4	91	67.303	Oryzias_melastigma
ENSCAPG00000008935	PRPF4	97	82.816	ENSOGAG00000007802	PRPF4	86	82.816	Otolemur_garnettii
ENSCAPG00000008935	PRPF4	97	88.783	ENSOARG00000006319	PRPF4	85	88.783	Ovis_aries
ENSCAPG00000008935	PRPF4	97	88.305	ENSPPAG00000041797	PRPF4	88	88.305	Pan_paniscus
ENSCAPG00000008935	PRPF4	97	88.544	ENSPPRG00000014360	PRPF4	88	88.544	Panthera_pardus
ENSCAPG00000008935	PRPF4	97	88.544	ENSPTIG00000009574	PRPF4	88	88.544	Panthera_tigris_altaica
ENSCAPG00000008935	PRPF4	97	88.305	ENSPTRG00000021274	PRPF4	88	88.305	Pan_troglodytes
ENSCAPG00000008935	PRPF4	97	88.544	ENSPANG00000025776	PRPF4	83	89.781	Papio_anubis
ENSCAPG00000008935	PRPF4	97	74.224	ENSPKIG00000017259	prpf4	91	74.224	Paramormyrops_kingsleyae
ENSCAPG00000008935	PRPF4	97	83.055	ENSPSIG00000010713	PRPF4	73	83.055	Pelodiscus_sinensis
ENSCAPG00000008935	PRPF4	97	50.000	ENSPMGG00000000997	prpf4	76	50.000	Periophthalmus_magnuspinnatus
ENSCAPG00000008935	PRPF4	97	88.305	ENSPEMG00000024115	Prpf4	88	88.305	Peromyscus_maniculatus_bairdii
ENSCAPG00000008935	PRPF4	97	86.396	ENSPCIG00000003821	PRPF4	89	86.396	Phascolarctos_cinereus
ENSCAPG00000008935	PRPF4	97	60.993	ENSPFOG00000013524	prpf4	90	60.993	Poecilia_formosa
ENSCAPG00000008935	PRPF4	65	64.643	ENSPLAG00000011620	prpf4	83	64.643	Poecilia_latipinna
ENSCAPG00000008935	PRPF4	67	67.241	ENSPMEG00000006813	prpf4	86	67.241	Poecilia_mexicana
ENSCAPG00000008935	PRPF4	97	88.067	ENSPCAG00000002561	PRPF4	88	89.294	Procavia_capensis
ENSCAPG00000008935	PRPF4	97	88.544	ENSPCOG00000011975	PRPF4	88	88.544	Propithecus_coquereli
ENSCAPG00000008935	PRPF4	97	87.351	ENSPVAG00000004708	PRPF4	88	87.351	Pteropus_vampyrus
ENSCAPG00000008935	PRPF4	97	69.212	ENSPNYG00000008013	prpf4	90	69.212	Pundamilia_nyererei
ENSCAPG00000008935	PRPF4	97	72.792	ENSPNAG00000000697	prpf4	82	72.792	Pygocentrus_nattereri
ENSCAPG00000008935	PRPF4	97	88.544	ENSRNOG00000014777	Prpf4	88	88.544	Rattus_norvegicus
ENSCAPG00000008935	PRPF4	97	88.544	ENSRBIG00000040221	PRPF4	88	88.544	Rhinopithecus_bieti
ENSCAPG00000008935	PRPF4	97	88.544	ENSRROG00000040240	PRPF4	88	88.544	Rhinopithecus_roxellana
ENSCAPG00000008935	PRPF4	97	86.635	ENSSHAG00000017658	PRPF4	88	86.635	Sarcophilus_harrisii
ENSCAPG00000008935	PRPF4	97	74.702	ENSSFOG00015008963	prpf4	89	75.912	Scleropages_formosus
ENSCAPG00000008935	PRPF4	92	70.277	ENSSMAG00000008889	prpf4	90	70.277	Scophthalmus_maximus
ENSCAPG00000008935	PRPF4	97	68.735	ENSSDUG00000022083	prpf4	81	68.735	Seriola_dumerili
ENSCAPG00000008935	PRPF4	97	68.735	ENSSLDG00000008115	prpf4	81	68.735	Seriola_lalandi_dorsalis
ENSCAPG00000008935	PRPF4	97	83.771	ENSSPUG00000015582	PRPF4	89	83.771	Sphenodon_punctatus
ENSCAPG00000008935	PRPF4	97	63.033	ENSSPAG00000011286	prpf4	89	63.033	Stegastes_partitus
ENSCAPG00000008935	PRPF4	97	88.544	ENSSSCG00000024648	PRPF4	88	88.544	Sus_scrofa
ENSCAPG00000008935	PRPF4	97	81.384	ENSTGUG00000002623	PRPF4	94	81.384	Taeniopygia_guttata
ENSCAPG00000008935	PRPF4	97	68.258	ENSTRUG00000008853	prpf4	90	68.258	Takifugu_rubripes
ENSCAPG00000008935	PRPF4	97	67.542	ENSTNIG00000013250	prpf4	91	67.542	Tetraodon_nigroviridis
ENSCAPG00000008935	PRPF4	97	84.248	ENSTBEG00000000821	PRPF4	88	84.248	Tupaia_belangeri
ENSCAPG00000008935	PRPF4	79	90.604	ENSTTRG00000003246	PRPF4	75	90.604	Tursiops_truncatus
ENSCAPG00000008935	PRPF4	64	84.588	ENSUAMG00000018288	PRPF4	80	84.588	Ursus_americanus
ENSCAPG00000008935	PRPF4	97	87.828	ENSUMAG00000019375	PRPF4	88	87.828	Ursus_maritimus
ENSCAPG00000008935	PRPF4	97	88.544	ENSVPAG00000005281	PRPF4	88	88.544	Vicugna_pacos
ENSCAPG00000008935	PRPF4	97	88.180	ENSVVUG00000002476	PRPF4	90	89.398	Vulpes_vulpes
ENSCAPG00000008935	PRPF4	78	53.254	ENSXCOG00000006101	prpf4	87	52.507	Xiphophorus_couchianus
ENSCAPG00000008935	PRPF4	91	60.406	ENSXMAG00000002750	prpf4	84	60.406	Xiphophorus_maculatus