EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000008957 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 60046 bases
Position: chrAVPZ01000334.1:36308316-36368361
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000006926	Rif1_N	PF12231.8	3.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010610	RIF1-201	5547	-	ENSCAPP00000006926	1848 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000008957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000008957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000008957	RIF1	96	83.721	ENSG00000080345	RIF1	79	83.721	Homo_sapiens
ENSCAPG00000008957	RIF1	69	39.660	ENSAPOG00000011073	rif1	58	39.660	Acanthochromis_polyacanthus
ENSCAPG00000008957	RIF1	96	76.513	ENSAMEG00000008461	RIF1	79	76.513	Ailuropoda_melanoleuca
ENSCAPG00000008957	RIF1	65	40.000	ENSACIG00000017765	rif1	60	41.884	Amphilophus_citrinellus
ENSCAPG00000008957	RIF1	91	37.387	ENSAOCG00000017231	rif1	60	37.110	Amphiprion_ocellaris
ENSCAPG00000008957	RIF1	64	44.404	ENSAPEG00000013228	rif1	50	44.404	Amphiprion_percula
ENSCAPG00000008957	RIF1	71	42.183	ENSATEG00000022887	rif1	62	40.730	Anabas_testudineus
ENSCAPG00000008957	RIF1	94	56.331	ENSAPLG00000007092	RIF1	82	56.331	Anas_platyrhynchos
ENSCAPG00000008957	RIF1	92	58.140	ENSACAG00000003714	RIF1	74	58.140	Anolis_carolinensis
ENSCAPG00000008957	RIF1	96	86.047	ENSANAG00000024840	RIF1	79	86.047	Aotus_nancymaae
ENSCAPG00000008957	RIF1	72	39.352	ENSAMXG00000010910	rif1	60	39.444	Astyanax_mexicanus
ENSCAPG00000008957	RIF1	94	74.074	ENSBTAG00000021020	RIF1	76	83.163	Bos_taurus
ENSCAPG00000008957	RIF1	96	86.047	ENSCJAG00000003138	RIF1	79	86.047	Callithrix_jacchus
ENSCAPG00000008957	RIF1	96	75.545	ENSCAFG00000005670	RIF1	78	75.545	Canis_familiaris
ENSCAPG00000008957	RIF1	96	76.515	ENSCAFG00020016401	RIF1	82	76.515	Canis_lupus_dingo
ENSCAPG00000008957	RIF1	96	75.059	ENSCHIG00000020327	RIF1	80	75.059	Capra_hircus
ENSCAPG00000008957	RIF1	99	78.469	ENSTSYG00000008861	RIF1	84	78.469	Carlito_syrichta
ENSCAPG00000008957	RIF1	95	97.674	ENSCPOG00000037898	RIF1	79	97.674	Cavia_porcellus
ENSCAPG00000008957	RIF1	99	75.116	ENSCCAG00000024760	RIF1	79	86.047	Cebus_capucinus
ENSCAPG00000008957	RIF1	96	86.047	ENSCATG00000033353	RIF1	79	86.047	Cercocebus_atys
ENSCAPG00000008957	RIF1	94	80.186	ENSCLAG00000001517	RIF1	84	80.186	Chinchilla_lanigera
ENSCAPG00000008957	RIF1	96	86.047	ENSCSAG00000016089	RIF1	79	86.047	Chlorocebus_sabaeus
ENSCAPG00000008957	RIF1	90	73.843	ENSCHOG00000007187	RIF1	75	73.843	Choloepus_hoffmanni
ENSCAPG00000008957	RIF1	92	57.995	ENSCPBG00000025885	RIF1	83	58.473	Chrysemys_picta_bellii
ENSCAPG00000008957	RIF1	91	86.047	ENSCANG00000028962	RIF1	78	86.047	Colobus_angolensis_palliatus
ENSCAPG00000008957	RIF1	99	76.744	ENSCGRG00001024589	Rif1	86	76.744	Cricetulus_griseus_chok1gshd
ENSCAPG00000008957	RIF1	99	76.744	ENSCGRG00000010713	Rif1	87	76.744	Cricetulus_griseus_crigri
ENSCAPG00000008957	RIF1	62	47.451	ENSCSEG00000003945	rif1	58	45.051	Cynoglossus_semilaevis
ENSCAPG00000008957	RIF1	69	41.840	ENSCVAG00000022479	rif1	56	41.840	Cyprinodon_variegatus
ENSCAPG00000008957	RIF1	63	54.601	ENSDARG00000062650	rif1	53	54.601	Danio_rerio
ENSCAPG00000008957	RIF1	96	76.744	ENSDNOG00000011194	RIF1	76	76.744	Dasypus_novemcinctus
ENSCAPG00000008957	RIF1	87	54.254	ENSETEG00000012421	RIF1	70	67.308	Echinops_telfairi
ENSCAPG00000008957	RIF1	96	79.070	ENSEASG00005023434	RIF1	78	79.070	Equus_asinus_asinus
ENSCAPG00000008957	RIF1	96	79.070	ENSECAG00000012679	RIF1	78	79.070	Equus_caballus
ENSCAPG00000008957	RIF1	95	73.611	ENSFCAG00000029742	RIF1	79	73.611	Felis_catus
ENSCAPG00000008957	RIF1	88	58.974	ENSFALG00000013874	RIF1	78	59.615	Ficedula_albicollis
ENSCAPG00000008957	RIF1	96	80.184	ENSFDAG00000006538	RIF1	82	80.796	Fukomys_damarensis
ENSCAPG00000008957	RIF1	62	38.966	ENSFHEG00000013721	rif1	52	41.483	Fundulus_heteroclitus
ENSCAPG00000008957	RIF1	54	42.254	ENSGMOG00000003517	rif1	69	42.254	Gadus_morhua
ENSCAPG00000008957	RIF1	92	55.844	ENSGALG00000012484	RIF1	82	56.283	Gallus_gallus
ENSCAPG00000008957	RIF1	65	41.590	ENSGAFG00000017196	rif1	56	41.270	Gambusia_affinis
ENSCAPG00000008957	RIF1	59	46.939	ENSGACG00000008579	rif1	54	47.581	Gasterosteus_aculeatus
ENSCAPG00000008957	RIF1	89	62.849	ENSGAGG00000012595	RIF1	87	62.640	Gopherus_agassizii
ENSCAPG00000008957	RIF1	84	83.721	ENSGGOG00000040178	RIF1	74	83.721	Gorilla_gorilla
ENSCAPG00000008957	RIF1	76	47.390	ENSHBUG00000007125	rif1	56	47.390	Haplochromis_burtoni
ENSCAPG00000008957	RIF1	89	81.395	ENSHGLG00100009807	RIF1	78	81.395	Heterocephalus_glaber_male
ENSCAPG00000008957	RIF1	68	41.292	ENSHCOG00000015943	rif1	51	41.292	Hippocampus_comes
ENSCAPG00000008957	RIF1	65	43.296	ENSIPUG00000021703	rif1	56	42.541	Ictalurus_punctatus
ENSCAPG00000008957	RIF1	95	83.721	ENSSTOG00000020712	RIF1	79	83.721	Ictidomys_tridecemlineatus
ENSCAPG00000008957	RIF1	94	67.536	ENSJJAG00000023000	Rif1	80	67.376	Jaculus_jaculus
ENSCAPG00000008957	RIF1	80	37.394	ENSKMAG00000002852	rif1	57	40.119	Kryptolebias_marmoratus
ENSCAPG00000008957	RIF1	90	53.457	ENSLACG00000005425	RIF1	72	53.457	Latimeria_chalumnae
ENSCAPG00000008957	RIF1	82	42.378	ENSLOCG00000002657	rif1	77	38.642	Lepisosteus_oculatus
ENSCAPG00000008957	RIF1	96	66.667	ENSLAFG00000009796	RIF1	80	75.231	Loxodonta_africana
ENSCAPG00000008957	RIF1	96	86.047	ENSMFAG00000032233	RIF1	79	86.047	Macaca_fascicularis
ENSCAPG00000008957	RIF1	96	86.047	ENSMMUG00000008611	RIF1	79	86.047	Macaca_mulatta
ENSCAPG00000008957	RIF1	96	86.047	ENSMNEG00000031616	RIF1	79	86.047	Macaca_nemestrina
ENSCAPG00000008957	RIF1	96	86.047	ENSMLEG00000042945	RIF1	79	86.047	Mandrillus_leucophaeus
ENSCAPG00000008957	RIF1	69	42.560	ENSMAMG00000001745	rif1	50	42.900	Mastacembelus_armatus
ENSCAPG00000008957	RIF1	76	40.816	ENSMZEG00005020920	rif1	64	40.233	Maylandia_zebra
ENSCAPG00000008957	RIF1	92	55.814	ENSMGAG00000012732	RIF1	78	55.814	Meleagris_gallopavo
ENSCAPG00000008957	RIF1	96	81.395	ENSMAUG00000013158	Rif1	79	81.395	Mesocricetus_auratus
ENSCAPG00000008957	RIF1	96	81.395	ENSMICG00000046127	RIF1	80	81.395	Microcebus_murinus
ENSCAPG00000008957	RIF1	97	81.395	ENSMOCG00000009381	Rif1	82	81.395	Microtus_ochrogaster
ENSCAPG00000008957	RIF1	63	42.262	ENSMMOG00000006519	rif1	55	42.262	Mola_mola
ENSCAPG00000008957	RIF1	94	65.116	ENSMODG00000003703	RIF1	79	65.116	Monodelphis_domestica
ENSCAPG00000008957	RIF1	66	40.290	ENSMALG00000016759	rif1	56	40.870	Monopterus_albus
ENSCAPG00000008957	RIF1	99	79.070	MGP_CAROLIEiJ_G0023555	Rif1	80	79.070	Mus_caroli
ENSCAPG00000008957	RIF1	99	79.070	ENSMUSG00000036202	Rif1	79	79.070	Mus_musculus
ENSCAPG00000008957	RIF1	96	79.070	MGP_PahariEiJ_G0025006	Rif1	79	79.070	Mus_pahari
ENSCAPG00000008957	RIF1	99	79.070	MGP_SPRETEiJ_G0024476	Rif1	79	79.070	Mus_spretus
ENSCAPG00000008957	RIF1	96	75.059	ENSMPUG00000000371	RIF1	79	75.059	Mustela_putorius_furo
ENSCAPG00000008957	RIF1	92	71.163	ENSMLUG00000003376	RIF1	86	71.163	Myotis_lucifugus
ENSCAPG00000008957	RIF1	96	81.395	ENSNGAG00000009268	Rif1	84	81.395	Nannospalax_galili
ENSCAPG00000008957	RIF1	80	41.358	ENSNBRG00000014257	rif1	60	41.818	Neolamprologus_brichardi
ENSCAPG00000008957	RIF1	96	83.721	ENSNLEG00000010955	RIF1	80	83.721	Nomascus_leucogenys
ENSCAPG00000008957	RIF1	71	72.662	ENSMEUG00000007601	-	61	72.662	Notamacropus_eugenii
ENSCAPG00000008957	RIF1	93	86.047	ENSODEG00000003950	RIF1	78	86.047	Octodon_degus
ENSCAPG00000008957	RIF1	64	42.202	ENSONIG00000013657	rif1	55	42.202	Oreochromis_niloticus
ENSCAPG00000008957	RIF1	76	62.791	ENSOANG00000006078	-	67	62.791	Ornithorhynchus_anatinus
ENSCAPG00000008957	RIF1	96	74.880	ENSOCUG00000017435	RIF1	83	74.880	Oryctolagus_cuniculus
ENSCAPG00000008957	RIF1	69	38.739	ENSORLG00020001302	rif1	57	38.900	Oryzias_latipes_hni
ENSCAPG00000008957	RIF1	69	39.039	ENSORLG00015000009	rif1	57	38.438	Oryzias_latipes_hsok
ENSCAPG00000008957	RIF1	63	40.190	ENSOMEG00000021513	rif1	56	40.000	Oryzias_melastigma
ENSCAPG00000008957	RIF1	96	86.047	ENSOGAG00000006141	RIF1	79	86.047	Otolemur_garnettii
ENSCAPG00000008957	RIF1	96	75.297	ENSOARG00000008930	RIF1	79	75.297	Ovis_aries
ENSCAPG00000008957	RIF1	96	83.721	ENSPPAG00000023754	RIF1	79	83.721	Pan_paniscus
ENSCAPG00000008957	RIF1	95	73.843	ENSPPRG00000003618	RIF1	79	73.843	Panthera_pardus
ENSCAPG00000008957	RIF1	95	73.843	ENSPTIG00000020652	RIF1	79	73.843	Panthera_tigris_altaica
ENSCAPG00000008957	RIF1	96	83.721	ENSPTRG00000012534	RIF1	79	83.721	Pan_troglodytes
ENSCAPG00000008957	RIF1	96	86.047	ENSPANG00000008525	RIF1	79	86.047	Papio_anubis
ENSCAPG00000008957	RIF1	81	44.713	ENSPKIG00000004267	rif1	57	44.713	Paramormyrops_kingsleyae
ENSCAPG00000008957	RIF1	69	38.636	ENSPMGG00000016141	rif1	63	42.444	Periophthalmus_magnuspinnatus
ENSCAPG00000008957	RIF1	96	81.395	ENSPEMG00000000446	Rif1	80	81.395	Peromyscus_maniculatus_bairdii
ENSCAPG00000008957	RIF1	94	65.116	ENSPCIG00000009185	RIF1	81	65.116	Phascolarctos_cinereus
ENSCAPG00000008957	RIF1	80	38.368	ENSPFOG00000000554	-	61	41.718	Poecilia_formosa
ENSCAPG00000008957	RIF1	80	38.302	ENSPFOG00000017804	rif1	56	40.964	Poecilia_formosa
ENSCAPG00000008957	RIF1	66	41.088	ENSPLAG00000017945	rif1	74	39.130	Poecilia_latipinna
ENSCAPG00000008957	RIF1	63	40.456	ENSPMEG00000006897	-	62	40.456	Poecilia_mexicana
ENSCAPG00000008957	RIF1	84	37.167	ENSPREG00000018052	rif1	54	42.056	Poecilia_reticulata
ENSCAPG00000008957	RIF1	96	83.721	ENSPPYG00000012846	RIF1	79	83.721	Pongo_abelii
ENSCAPG00000008957	RIF1	68	97.778	ENSPCAG00000009032	RIF1	53	97.778	Procavia_capensis
ENSCAPG00000008957	RIF1	95	83.721	ENSPCOG00000027888	RIF1	79	83.721	Propithecus_coquereli
ENSCAPG00000008957	RIF1	84	79.070	ENSPVAG00000014276	RIF1	72	79.070	Pteropus_vampyrus
ENSCAPG00000008957	RIF1	54	41.667	ENSPNYG00000012940	rif1	63	40.816	Pundamilia_nyererei
ENSCAPG00000008957	RIF1	67	41.809	ENSPNAG00000016685	rif1	58	41.809	Pygocentrus_nattereri
ENSCAPG00000008957	RIF1	99	76.744	ENSRNOG00000054901	Rif1	82	76.744	Rattus_norvegicus
ENSCAPG00000008957	RIF1	96	86.047	ENSRBIG00000003704	RIF1	79	86.047	Rhinopithecus_bieti
ENSCAPG00000008957	RIF1	96	86.047	ENSRROG00000028206	RIF1	79	86.047	Rhinopithecus_roxellana
ENSCAPG00000008957	RIF1	99	74.651	ENSSBOG00000029530	RIF1	85	74.651	Saimiri_boliviensis_boliviensis
ENSCAPG00000008957	RIF1	95	62.791	ENSSHAG00000018552	RIF1	85	59.310	Sarcophilus_harrisii
ENSCAPG00000008957	RIF1	65	44.048	ENSSFOG00015021539	rif1	59	44.048	Scleropages_formosus
ENSCAPG00000008957	RIF1	68	55.488	ENSSMAG00000011704	rif1	50	55.152	Scophthalmus_maximus
ENSCAPG00000008957	RIF1	68	43.072	ENSSDUG00000015632	rif1	58	42.522	Seriola_dumerili
ENSCAPG00000008957	RIF1	69	41.192	ENSSLDG00000019531	rif1	56	41.192	Seriola_lalandi_dorsalis
ENSCAPG00000008957	RIF1	90	58.793	ENSSPUG00000003062	RIF1	81	58.793	Sphenodon_punctatus
ENSCAPG00000008957	RIF1	94	75.000	ENSSSCG00000016395	RIF1	79	76.744	Sus_scrofa
ENSCAPG00000008957	RIF1	67	41.598	ENSTRUG00000015808	rif1	59	41.598	Takifugu_rubripes
ENSCAPG00000008957	RIF1	65	44.512	ENSTNIG00000011538	rif1	57	44.648	Tetraodon_nigroviridis
ENSCAPG00000008957	RIF1	76	89.172	ENSTBEG00000016082	RIF1	60	89.172	Tupaia_belangeri
ENSCAPG00000008957	RIF1	96	76.157	ENSTTRG00000011190	RIF1	79	76.157	Tursiops_truncatus
ENSCAPG00000008957	RIF1	93	76.755	ENSUAMG00000026385	RIF1	84	76.755	Ursus_americanus
ENSCAPG00000008957	RIF1	96	76.755	ENSUMAG00000000337	RIF1	78	76.755	Ursus_maritimus
ENSCAPG00000008957	RIF1	96	75.297	ENSVPAG00000002162	RIF1	80	75.297	Vicugna_pacos
ENSCAPG00000008957	RIF1	96	75.545	ENSVVUG00000011293	RIF1	82	75.545	Vulpes_vulpes
ENSCAPG00000008957	RIF1	90	57.879	ENSXETG00000004530	rif1	70	57.879	Xenopus_tropicalis
ENSCAPG00000008957	RIF1	66	37.573	ENSXMAG00000000506	rif1	55	37.876	Xiphophorus_maculatus