EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000009069 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 2181 bases
Position: chrAVPZ01000112.1:72958667-72960847
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007028	PAM2	PF07145.15	7.8e-05	1	1
ENSCAPP00000007026	PAM2	PF07145.15	8.6e-05	1	1
ENSCAPP00000007028	MIF4G	PF02854.19	1.5e-30	1	1
ENSCAPP00000007026	MIF4G	PF02854.19	1.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010714	-	1170	-	ENSCAPP00000007028	389 (aa)	-	-
ENSCAPT00000010712	-	1254	-	ENSCAPP00000007026	417 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000009069	-	83	79.758	ENSCAPG00000004004	-	96	79.758
ENSCAPG00000009069	-	67	90.717	ENSCAPG00000011453	-	100	90.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009069	-	100	89.500	ENSG00000172239	PAIP1	99	92.965	Homo_sapiens
ENSCAPG00000009069	-	90	61.773	ENSAPOG00000006399	paip1	91	59.167	Acanthochromis_polyacanthus
ENSCAPG00000009069	-	98	90.585	ENSAMEG00000003938	PAIP1	99	88.806	Ailuropoda_melanoleuca
ENSCAPG00000009069	-	95	54.762	ENSACIG00000020292	paip1	100	54.762	Amphilophus_citrinellus
ENSCAPG00000009069	-	95	56.235	ENSAOCG00000006621	paip1	89	56.235	Amphiprion_ocellaris
ENSCAPG00000009069	-	96	58.656	ENSAPEG00000015887	paip1	98	55.959	Amphiprion_percula
ENSCAPG00000009069	-	97	55.612	ENSATEG00000021896	paip1	98	55.612	Anabas_testudineus
ENSCAPG00000009069	-	89	79.494	ENSAPLG00000001947	PAIP1	99	78.261	Anas_platyrhynchos
ENSCAPG00000009069	-	93	74.332	ENSACAG00000010867	PAIP1	96	67.523	Anolis_carolinensis
ENSCAPG00000009069	-	98	85.156	ENSANAG00000010174	-	100	84.935	Aotus_nancymaae
ENSCAPG00000009069	-	99	82.532	ENSANAG00000036342	-	98	83.077	Aotus_nancymaae
ENSCAPG00000009069	-	98	90.793	ENSANAG00000021765	-	96	88.131	Aotus_nancymaae
ENSCAPG00000009069	-	96	55.556	ENSACLG00000009431	paip1	95	53.457	Astatotilapia_calliptera
ENSCAPG00000009069	-	93	58.065	ENSAMXG00000013007	paip1	86	56.456	Astyanax_mexicanus
ENSCAPG00000009069	-	100	87.750	ENSBTAG00000020376	PAIP1	100	87.750	Bos_taurus
ENSCAPG00000009069	-	98	90.793	ENSCJAG00000001340	PAIP1	97	87.906	Callithrix_jacchus
ENSCAPG00000009069	-	100	88.500	ENSCAFG00020022519	PAIP1	100	88.500	Canis_lupus_dingo
ENSCAPG00000009069	-	100	88.000	ENSCHIG00000011111	PAIP1	100	88.000	Capra_hircus
ENSCAPG00000009069	-	99	90.863	ENSTSYG00000004304	PAIP1	100	91.282	Carlito_syrichta
ENSCAPG00000009069	-	98	91.837	ENSCPOG00000002525	-	99	92.603	Cavia_porcellus
ENSCAPG00000009069	-	98	81.378	ENSCPOG00000001035	-	92	78.832	Cavia_porcellus
ENSCAPG00000009069	-	100	89.203	ENSCPOG00000031032	-	100	89.203	Cavia_porcellus
ENSCAPG00000009069	-	98	90.281	ENSCCAG00000028929	-	97	87.611	Cebus_capucinus
ENSCAPG00000009069	-	97	77.979	ENSCCAG00000008870	-	100	77.979	Cebus_capucinus
ENSCAPG00000009069	-	98	88.747	ENSCATG00000041555	PAIP1	97	86.726	Cercocebus_atys
ENSCAPG00000009069	-	98	92.092	ENSCLAG00000009167	PAIP1	99	91.837	Chinchilla_lanigera
ENSCAPG00000009069	-	100	89.500	ENSCSAG00000016750	PAIP1	100	89.500	Chlorocebus_sabaeus
ENSCAPG00000009069	-	98	81.074	ENSCHOG00000004961	PAIP1	81	81.074	Choloepus_hoffmanni
ENSCAPG00000009069	-	96	80.940	ENSCPBG00000007653	PAIP1	75	80.940	Chrysemys_picta_bellii
ENSCAPG00000009069	-	92	90.984	ENSCANG00000034884	PAIP1	99	90.984	Colobus_angolensis_palliatus
ENSCAPG00000009069	-	98	90.513	ENSCGRG00001009535	Paip1	86	87.574	Cricetulus_griseus_chok1gshd
ENSCAPG00000009069	-	93	70.541	ENSCGRG00000006932	-	97	70.541	Cricetulus_griseus_crigri
ENSCAPG00000009069	-	98	90.488	ENSCGRG00000008504	Paip1	100	90.488	Cricetulus_griseus_crigri
ENSCAPG00000009069	-	90	57.576	ENSCSEG00000020061	paip1	82	57.576	Cynoglossus_semilaevis
ENSCAPG00000009069	-	80	57.099	ENSCSEG00000009725	paip1	83	54.913	Cynoglossus_semilaevis
ENSCAPG00000009069	-	99	49.663	ENSCVAG00000019990	paip1	99	50.562	Cyprinodon_variegatus
ENSCAPG00000009069	-	90	59.280	ENSDARG00000042892	paip1	84	59.280	Danio_rerio
ENSCAPG00000009069	-	98	89.258	ENSDNOG00000018687	PAIP1	82	89.258	Dasypus_novemcinctus
ENSCAPG00000009069	-	96	72.917	ENSDORG00000009739	Paip1	82	87.678	Dipodomys_ordii
ENSCAPG00000009069	-	68	90.441	ENSETEG00000001360	PAIP1	57	90.441	Echinops_telfairi
ENSCAPG00000009069	-	100	88.500	ENSEASG00005013479	PAIP1	99	91.257	Equus_asinus_asinus
ENSCAPG00000009069	-	100	88.750	ENSECAG00000015245	PAIP1	99	91.257	Equus_caballus
ENSCAPG00000009069	-	68	89.338	ENSEEUG00000009651	-	100	89.338	Erinaceus_europaeus
ENSCAPG00000009069	-	93	73.514	ENSEEUG00000007196	-	99	73.784	Erinaceus_europaeus
ENSCAPG00000009069	-	90	61.602	ENSELUG00000003634	paip1	80	61.602	Esox_lucius
ENSCAPG00000009069	-	98	75.827	ENSFALG00000011181	PAIP1	97	75.827	Ficedula_albicollis
ENSCAPG00000009069	-	98	92.031	ENSFDAG00000006043	-	100	92.031	Fukomys_damarensis
ENSCAPG00000009069	-	98	78.316	ENSFDAG00000019263	-	99	78.316	Fukomys_damarensis
ENSCAPG00000009069	-	90	53.239	ENSFHEG00000006388	paip1	84	53.239	Fundulus_heteroclitus
ENSCAPG00000009069	-	94	57.979	ENSGMOG00000007366	paip1	84	57.979	Gadus_morhua
ENSCAPG00000009069	-	92	78.437	ENSGALG00000014867	PAIP1	99	78.437	Gallus_gallus
ENSCAPG00000009069	-	94	57.662	ENSGAFG00000017213	paip1	95	58.182	Gambusia_affinis
ENSCAPG00000009069	-	96	55.556	ENSGACG00000004529	paip1	88	54.950	Gasterosteus_aculeatus
ENSCAPG00000009069	-	92	91.257	ENSGGOG00000022753	-	99	91.257	Gorilla_gorilla
ENSCAPG00000009069	-	96	55.814	ENSHBUG00000012178	paip1	95	53.723	Haplochromis_burtoni
ENSCAPG00000009069	-	98	85.640	ENSHGLG00000010516	-	80	85.640	Heterocephalus_glaber_female
ENSCAPG00000009069	-	83	65.350	ENSHGLG00000009454	-	80	65.350	Heterocephalus_glaber_female
ENSCAPG00000009069	-	73	76.289	ENSHGLG00000016945	-	74	76.109	Heterocephalus_glaber_female
ENSCAPG00000009069	-	100	71.684	ENSHGLG00100006972	-	100	71.684	Heterocephalus_glaber_male
ENSCAPG00000009069	-	99	91.919	ENSHGLG00100008654	-	99	92.112	Heterocephalus_glaber_male
ENSCAPG00000009069	-	83	65.350	ENSHGLG00100004931	-	80	65.350	Heterocephalus_glaber_male
ENSCAPG00000009069	-	100	75.188	ENSHGLG00100004947	-	100	75.188	Heterocephalus_glaber_male
ENSCAPG00000009069	-	100	78.086	ENSHGLG00100012598	-	92	78.086	Heterocephalus_glaber_male
ENSCAPG00000009069	-	89	57.778	ENSHCOG00000006548	paip1	88	57.576	Hippocampus_comes
ENSCAPG00000009069	-	92	58.038	ENSIPUG00000023598	paip1	99	57.143	Ictalurus_punctatus
ENSCAPG00000009069	-	98	91.049	ENSSTOG00000011203	PAIP1	83	89.759	Ictidomys_tridecemlineatus
ENSCAPG00000009069	-	93	76.486	ENSJJAG00000022830	-	96	76.486	Jaculus_jaculus
ENSCAPG00000009069	-	92	90.556	ENSJJAG00000011812	-	99	90.556	Jaculus_jaculus
ENSCAPG00000009069	-	98	63.255	ENSJJAG00000023587	-	97	63.255	Jaculus_jaculus
ENSCAPG00000009069	-	98	76.215	ENSJJAG00000012411	-	94	76.215	Jaculus_jaculus
ENSCAPG00000009069	-	98	66.752	ENSJJAG00000022023	-	97	66.752	Jaculus_jaculus
ENSCAPG00000009069	-	90	58.172	ENSKMAG00000005128	paip1	79	58.726	Kryptolebias_marmoratus
ENSCAPG00000009069	-	95	58.031	ENSLBEG00000023703	paip1	85	58.031	Labrus_bergylta
ENSCAPG00000009069	-	97	63.939	ENSLOCG00000012270	paip1	82	64.908	Lepisosteus_oculatus
ENSCAPG00000009069	-	100	87.250	ENSLAFG00000012827	PAIP1	100	87.250	Loxodonta_africana
ENSCAPG00000009069	-	98	90.793	ENSMFAG00000043517	PAIP1	97	87.906	Macaca_fascicularis
ENSCAPG00000009069	-	92	91.257	ENSMMUG00000011878	PAIP1	99	91.257	Macaca_mulatta
ENSCAPG00000009069	-	100	86.000	ENSMNEG00000031868	PAIP1	100	86.000	Macaca_nemestrina
ENSCAPG00000009069	-	99	89.924	ENSMLEG00000030867	PAIP1	100	90.769	Mandrillus_leucophaeus
ENSCAPG00000009069	-	96	57.364	ENSMAMG00000012182	paip1	88	56.608	Mastacembelus_armatus
ENSCAPG00000009069	-	96	55.556	ENSMZEG00005012328	paip1	95	53.457	Maylandia_zebra
ENSCAPG00000009069	-	98	51.269	ENSMGAG00000003696	PAIP1	97	51.269	Meleagris_gallopavo
ENSCAPG00000009069	-	100	88.471	ENSMAUG00000014688	Paip1	100	88.471	Mesocricetus_auratus
ENSCAPG00000009069	-	98	90.281	ENSMICG00000008198	-	97	87.316	Microcebus_murinus
ENSCAPG00000009069	-	100	84.712	ENSMICG00000032513	-	100	84.712	Microcebus_murinus
ENSCAPG00000009069	-	98	90.769	ENSMOCG00000000834	Paip1	81	90.769	Microtus_ochrogaster
ENSCAPG00000009069	-	96	56.995	ENSMMOG00000010887	paip1	95	56.995	Mola_mola
ENSCAPG00000009069	-	98	81.888	ENSMODG00000020276	PAIP1	91	78.014	Monodelphis_domestica
ENSCAPG00000009069	-	98	56.709	ENSMALG00000021723	paip1	85	56.709	Monopterus_albus
ENSCAPG00000009069	-	100	87.000	MGP_CAROLIEiJ_G0018925	Paip1	99	89.071	Mus_caroli
ENSCAPG00000009069	-	100	89.250	ENSMUSG00000025451	Paip1	99	91.530	Mus_musculus
ENSCAPG00000009069	-	100	81.679	MGP_PahariEiJ_G0015995	-	96	88.889	Mus_pahari
ENSCAPG00000009069	-	100	89.000	MGP_SPRETEiJ_G0019804	Paip1	100	89.000	Mus_spretus
ENSCAPG00000009069	-	76	78.000	ENSMPUG00000014416	PAIP1	90	78.000	Mustela_putorius_furo
ENSCAPG00000009069	-	82	58.232	ENSMLUG00000013829	-	99	58.232	Myotis_lucifugus
ENSCAPG00000009069	-	98	86.667	ENSMLUG00000016794	PAIP1	82	86.667	Myotis_lucifugus
ENSCAPG00000009069	-	79	68.571	ENSNGAG00000006143	-	85	68.571	Nannospalax_galili
ENSCAPG00000009069	-	98	90.000	ENSNGAG00000022919	Paip1	81	90.000	Nannospalax_galili
ENSCAPG00000009069	-	96	55.814	ENSNBRG00000021188	paip1	99	52.533	Neolamprologus_brichardi
ENSCAPG00000009069	-	99	89.924	ENSNLEG00000010443	PAIP1	100	90.769	Nomascus_leucogenys
ENSCAPG00000009069	-	98	85.934	ENSOPRG00000000386	-	81	85.934	Ochotona_princeps
ENSCAPG00000009069	-	94	78.667	ENSODEG00000007487	-	86	78.667	Octodon_degus
ENSCAPG00000009069	-	92	90.685	ENSODEG00000000445	-	99	90.685	Octodon_degus
ENSCAPG00000009069	-	96	56.331	ENSONIG00000014285	paip1	85	56.589	Oreochromis_niloticus
ENSCAPG00000009069	-	68	78.598	ENSOANG00000007984	-	99	78.598	Ornithorhynchus_anatinus
ENSCAPG00000009069	-	97	90.933	ENSOCUG00000002739	-	79	90.933	Oryctolagus_cuniculus
ENSCAPG00000009069	-	71	85.614	ENSOCUG00000029136	-	98	85.614	Oryctolagus_cuniculus
ENSCAPG00000009069	-	90	59.557	ENSORLG00000001934	paip1	78	59.557	Oryzias_latipes
ENSCAPG00000009069	-	90	59.834	ENSORLG00020007108	paip1	78	59.834	Oryzias_latipes_hni
ENSCAPG00000009069	-	90	59.834	ENSORLG00015016664	paip1	78	59.834	Oryzias_latipes_hsok
ENSCAPG00000009069	-	96	57.623	ENSOMEG00000016193	paip1	85	57.623	Oryzias_melastigma
ENSCAPG00000009069	-	98	90.793	ENSOGAG00000001887	PAIP1	81	90.793	Otolemur_garnettii
ENSCAPG00000009069	-	98	88.579	ENSOARG00000008600	PAIP1	95	88.579	Ovis_aries
ENSCAPG00000009069	-	98	90.537	ENSPPAG00000036736	PAIP1	98	90.464	Pan_paniscus
ENSCAPG00000009069	-	98	90.793	ENSPPRG00000006567	PAIP1	97	87.906	Panthera_pardus
ENSCAPG00000009069	-	98	90.537	ENSPTRG00000016850	PAIP1	98	90.464	Pan_troglodytes
ENSCAPG00000009069	-	98	90.793	ENSPANG00000013349	PAIP1	97	87.906	Papio_anubis
ENSCAPG00000009069	-	98	52.696	ENSPKIG00000020456	paip1	92	52.696	Paramormyrops_kingsleyae
ENSCAPG00000009069	-	92	79.265	ENSPSIG00000018250	PAIP1	99	79.265	Pelodiscus_sinensis
ENSCAPG00000009069	-	71	48.065	ENSPMGG00000012371	paip1	89	48.065	Periophthalmus_magnuspinnatus
ENSCAPG00000009069	-	84	92.239	ENSPEMG00000020312	Paip1	100	92.216	Peromyscus_maniculatus_bairdii
ENSCAPG00000009069	-	98	81.888	ENSPCIG00000024521	PAIP1	97	78.235	Phascolarctos_cinereus
ENSCAPG00000009069	-	100	55.231	ENSPFOG00000015156	paip1	100	55.474	Poecilia_formosa
ENSCAPG00000009069	-	90	60.109	ENSPLAG00000011737	paip1	79	60.109	Poecilia_latipinna
ENSCAPG00000009069	-	90	58.904	ENSPMEG00000003121	paip1	79	59.178	Poecilia_mexicana
ENSCAPG00000009069	-	81	61.300	ENSPREG00000009992	paip1	86	58.689	Poecilia_reticulata
ENSCAPG00000009069	-	100	89.500	ENSPPYG00000015442	PAIP1	100	89.500	Pongo_abelii
ENSCAPG00000009069	-	98	87.692	ENSPCAG00000009997	-	85	87.692	Procavia_capensis
ENSCAPG00000009069	-	98	83.081	ENSPCOG00000020257	PAIP1	97	79.070	Propithecus_coquereli
ENSCAPG00000009069	-	98	88.974	ENSPVAG00000009395	PAIP1	81	88.974	Pteropus_vampyrus
ENSCAPG00000009069	-	96	55.556	ENSPNYG00000005916	paip1	95	53.457	Pundamilia_nyererei
ENSCAPG00000009069	-	96	59.173	ENSPNAG00000021307	paip1	98	57.606	Pygocentrus_nattereri
ENSCAPG00000009069	-	100	89.500	ENSRNOG00000058580	Paip1	99	91.530	Rattus_norvegicus
ENSCAPG00000009069	-	100	89.500	ENSRBIG00000015511	PAIP1	99	91.257	Rhinopithecus_bieti
ENSCAPG00000009069	-	98	90.793	ENSRROG00000043409	PAIP1	97	87.906	Rhinopithecus_roxellana
ENSCAPG00000009069	-	97	84.319	ENSSBOG00000022729	-	98	84.960	Saimiri_boliviensis_boliviensis
ENSCAPG00000009069	-	100	89.250	ENSSBOG00000024593	-	100	89.250	Saimiri_boliviensis_boliviensis
ENSCAPG00000009069	-	98	70.992	ENSSHAG00000009197	PAIP1	96	70.992	Sarcophilus_harrisii
ENSCAPG00000009069	-	89	61.173	ENSSFOG00015019741	paip1	99	61.173	Scleropages_formosus
ENSCAPG00000009069	-	96	55.297	ENSSMAG00000007789	paip1	85	55.297	Scophthalmus_maximus
ENSCAPG00000009069	-	96	57.772	ENSSDUG00000022573	paip1	89	55.961	Seriola_dumerili
ENSCAPG00000009069	-	96	58.031	ENSSLDG00000003742	paip1	89	56.204	Seriola_lalandi_dorsalis
ENSCAPG00000009069	-	76	90.099	ENSSARG00000001463	PAIP1	100	90.099	Sorex_araneus
ENSCAPG00000009069	-	95	79.474	ENSSPUG00000004810	PAIP1	94	70.628	Sphenodon_punctatus
ENSCAPG00000009069	-	90	60.665	ENSSPAG00000009614	paip1	78	60.665	Stegastes_partitus
ENSCAPG00000009069	-	100	88.500	ENSSSCG00000016874	PAIP1	100	88.500	Sus_scrofa
ENSCAPG00000009069	-	53	80.751	ENSTGUG00000002299	PAIP1	100	80.751	Taeniopygia_guttata
ENSCAPG00000009069	-	89	55.742	ENSTRUG00000016598	paip1	78	55.556	Takifugu_rubripes
ENSCAPG00000009069	-	97	53.266	ENSTNIG00000015937	paip1	85	53.266	Tetraodon_nigroviridis
ENSCAPG00000009069	-	98	72.123	ENSTTRG00000009747	PAIP1	81	72.123	Tursiops_truncatus
ENSCAPG00000009069	-	98	91.049	ENSUMAG00000006992	PAIP1	100	91.979	Ursus_maritimus
ENSCAPG00000009069	-	98	82.262	ENSVPAG00000007067	PAIP1	100	82.262	Vicugna_pacos
ENSCAPG00000009069	-	100	88.750	ENSVVUG00000025408	PAIP1	100	88.750	Vulpes_vulpes
ENSCAPG00000009069	-	99	56.391	ENSXETG00000033268	PAIP1	81	57.393	Xenopus_tropicalis
ENSCAPG00000009069	-	81	61.300	ENSXCOG00000009391	paip1	86	58.974	Xiphophorus_couchianus
ENSCAPG00000009069	-	90	58.356	ENSXMAG00000010142	paip1	79	58.904	Xiphophorus_maculatus