EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009085 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 9300 bases
Position: chrAVPZ01000223.1:25377866-25387165
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007057	TRM13	PF05206.14	1.2e-49	1	1
ENSCAPP00000007057	zf-U11-48K	PF05253.12	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000010744	TRMT13-201	909	-	ENSCAPP00000007057	303 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009085	TRMT13	100	70.137	ENSG00000122435	TRMT13	75	69.589	Homo_sapiens
ENSCAPG00000009085	TRMT13	94	36.951	ENSAPOG00000015131	trmt13	57	85.294	Acanthochromis_polyacanthus
ENSCAPG00000009085	TRMT13	100	68.044	ENSAMEG00000008917	TRMT13	75	67.493	Ailuropoda_melanoleuca
ENSCAPG00000009085	TRMT13	96	42.135	ENSACIG00000005804	trmt13	51	85.294	Amphilophus_citrinellus
ENSCAPG00000009085	TRMT13	99	38.287	ENSAOCG00000023585	trmt13	52	40.530	Amphiprion_ocellaris
ENSCAPG00000009085	TRMT13	94	38.243	ENSAPEG00000004025	trmt13	64	51.515	Amphiprion_percula
ENSCAPG00000009085	TRMT13	96	39.833	ENSATEG00000006597	trmt13	74	40.169	Anabas_testudineus
ENSCAPG00000009085	TRMT13	99	53.760	ENSAPLG00000014924	TRMT13	83	53.203	Anas_platyrhynchos
ENSCAPG00000009085	TRMT13	95	51.429	ENSACAG00000003498	TRMT13	74	49.714	Anolis_carolinensis
ENSCAPG00000009085	TRMT13	100	70.685	ENSANAG00000019525	TRMT13	75	70.137	Aotus_nancymaae
ENSCAPG00000009085	TRMT13	96	43.099	ENSACLG00000020018	trmt13	75	40.282	Astatotilapia_calliptera
ENSCAPG00000009085	TRMT13	89	45.289	ENSAMXG00000017963	trmt13	77	40.483	Astyanax_mexicanus
ENSCAPG00000009085	TRMT13	100	68.493	ENSBTAG00000015781	TRMT13	75	67.945	Bos_taurus
ENSCAPG00000009085	TRMT13	100	71.547	ENSCJAG00000000200	TRMT13	75	71.271	Callithrix_jacchus
ENSCAPG00000009085	TRMT13	77	82.353	ENSCAFG00000020021	TRMT13	75	82.353	Canis_familiaris
ENSCAPG00000009085	TRMT13	55	58.929	ENSCAFG00020011572	TRMT13	76	58.036	Canis_lupus_dingo
ENSCAPG00000009085	TRMT13	100	68.767	ENSCHIG00000015395	TRMT13	75	68.219	Capra_hircus
ENSCAPG00000009085	TRMT13	91	62.687	ENSTSYG00000010811	TRMT13	76	59.780	Carlito_syrichta
ENSCAPG00000009085	TRMT13	100	76.796	ENSCPOG00000000694	TRMT13	75	76.389	Cavia_porcellus
ENSCAPG00000009085	TRMT13	100	70.959	ENSCCAG00000023772	TRMT13	75	70.411	Cebus_capucinus
ENSCAPG00000009085	TRMT13	100	69.589	ENSCATG00000033556	TRMT13	75	69.041	Cercocebus_atys
ENSCAPG00000009085	TRMT13	94	70.145	ENSCLAG00000008220	TRMT13	84	69.231	Chinchilla_lanigera
ENSCAPG00000009085	TRMT13	100	70.137	ENSCSAG00000001506	TRMT13	75	69.589	Chlorocebus_sabaeus
ENSCAPG00000009085	TRMT13	95	60.000	ENSCPBG00000026671	TRMT13	73	56.196	Chrysemys_picta_bellii
ENSCAPG00000009085	TRMT13	100	70.137	ENSCANG00000034659	TRMT13	75	69.589	Colobus_angolensis_palliatus
ENSCAPG00000009085	TRMT13	100	67.493	ENSCGRG00001021601	Trmt13	75	66.942	Cricetulus_griseus_chok1gshd
ENSCAPG00000009085	TRMT13	63	77.835	ENSCGRG00000000093	-	75	77.835	Cricetulus_griseus_crigri
ENSCAPG00000009085	TRMT13	91	40.549	ENSCSEG00000000591	trmt13	73	38.720	Cynoglossus_semilaevis
ENSCAPG00000009085	TRMT13	92	40.625	ENSCVAG00000017342	trmt13	72	39.011	Cyprinodon_variegatus
ENSCAPG00000009085	TRMT13	95	46.724	ENSDARG00000102846	trmt13	73	44.729	Danio_rerio
ENSCAPG00000009085	TRMT13	53	60.455	ENSDNOG00000001710	TRMT13	66	59.545	Dasypus_novemcinctus
ENSCAPG00000009085	TRMT13	100	69.863	ENSDORG00000015808	Trmt13	75	69.421	Dipodomys_ordii
ENSCAPG00000009085	TRMT13	95	57.593	ENSETEG00000005819	TRMT13	53	93.939	Echinops_telfairi
ENSCAPG00000009085	TRMT13	87	43.772	ENSEBUG00000014444	trmt13	67	43.431	Eptatretus_burgeri
ENSCAPG00000009085	TRMT13	100	70.248	ENSEASG00005015918	TRMT13	75	69.697	Equus_asinus_asinus
ENSCAPG00000009085	TRMT13	100	69.972	ENSECAG00000022626	TRMT13	75	69.421	Equus_caballus
ENSCAPG00000009085	TRMT13	69	55.970	ENSEEUG00000000294	TRMT13	55	55.224	Erinaceus_europaeus
ENSCAPG00000009085	TRMT13	90	45.238	ENSELUG00000003803	trmt13	76	40.164	Esox_lucius
ENSCAPG00000009085	TRMT13	100	69.146	ENSFCAG00000030618	TRMT13	75	68.595	Felis_catus
ENSCAPG00000009085	TRMT13	99	49.722	ENSFALG00000002424	TRMT13	75	47.778	Ficedula_albicollis
ENSCAPG00000009085	TRMT13	100	73.554	ENSFDAG00000006342	TRMT13	75	73.003	Fukomys_damarensis
ENSCAPG00000009085	TRMT13	92	42.647	ENSFHEG00000022954	trmt13	87	41.813	Fundulus_heteroclitus
ENSCAPG00000009085	TRMT13	86	43.092	ENSGMOG00000013223	trmt13	76	44.737	Gadus_morhua
ENSCAPG00000009085	TRMT13	99	52.055	ENSGALG00000005290	TRMT13	75	51.507	Gallus_gallus
ENSCAPG00000009085	TRMT13	96	40.909	ENSGACG00000013428	trmt13	75	40.341	Gasterosteus_aculeatus
ENSCAPG00000009085	TRMT13	95	57.184	ENSGAGG00000023303	TRMT13	75	55.801	Gopherus_agassizii
ENSCAPG00000009085	TRMT13	100	70.137	ENSGGOG00000005616	TRMT13	75	69.589	Gorilla_gorilla
ENSCAPG00000009085	TRMT13	96	43.380	ENSHBUG00000007754	trmt13	75	40.563	Haplochromis_burtoni
ENSCAPG00000009085	TRMT13	100	73.829	ENSHGLG00000002164	TRMT13	75	73.278	Heterocephalus_glaber_female
ENSCAPG00000009085	TRMT13	100	73.829	ENSHGLG00100001618	TRMT13	75	73.278	Heterocephalus_glaber_male
ENSCAPG00000009085	TRMT13	97	38.841	ENSHCOG00000020553	trmt13	75	37.681	Hippocampus_comes
ENSCAPG00000009085	TRMT13	88	47.853	ENSIPUG00000024787	trmt13	73	45.366	Ictalurus_punctatus
ENSCAPG00000009085	TRMT13	100	71.074	ENSSTOG00000013483	TRMT13	75	70.523	Ictidomys_tridecemlineatus
ENSCAPG00000009085	TRMT13	100	66.575	ENSJJAG00000018012	Trmt13	76	66.116	Jaculus_jaculus
ENSCAPG00000009085	TRMT13	79	44.033	ENSKMAG00000007639	trmt13	63	46.479	Kryptolebias_marmoratus
ENSCAPG00000009085	TRMT13	96	40.166	ENSLBEG00000020238	trmt13	77	39.335	Labrus_bergylta
ENSCAPG00000009085	TRMT13	95	50.143	ENSLACG00000013153	TRMT13	82	46.646	Latimeria_chalumnae
ENSCAPG00000009085	TRMT13	95	48.266	ENSLOCG00000000418	trmt13	72	47.674	Lepisosteus_oculatus
ENSCAPG00000009085	TRMT13	85	67.314	ENSLAFG00000002383	TRMT13	64	78.151	Loxodonta_africana
ENSCAPG00000009085	TRMT13	100	69.589	ENSMFAG00000034681	TRMT13	75	69.041	Macaca_fascicularis
ENSCAPG00000009085	TRMT13	100	69.589	ENSMMUG00000004243	TRMT13	75	69.041	Macaca_mulatta
ENSCAPG00000009085	TRMT13	100	69.589	ENSMNEG00000036102	TRMT13	75	69.041	Macaca_nemestrina
ENSCAPG00000009085	TRMT13	100	69.863	ENSMLEG00000034258	TRMT13	75	69.315	Mandrillus_leucophaeus
ENSCAPG00000009085	TRMT13	94	43.939	ENSMAMG00000016597	trmt13	73	43.333	Mastacembelus_armatus
ENSCAPG00000009085	TRMT13	96	42.817	ENSMZEG00005020959	trmt13	75	40.000	Maylandia_zebra
ENSCAPG00000009085	TRMT13	99	52.222	ENSMGAG00000006970	TRMT13	79	52.616	Meleagris_gallopavo
ENSCAPG00000009085	TRMT13	100	66.116	ENSMAUG00000010448	Trmt13	75	65.565	Mesocricetus_auratus
ENSCAPG00000009085	TRMT13	100	70.799	ENSMICG00000005283	TRMT13	75	70.248	Microcebus_murinus
ENSCAPG00000009085	TRMT13	100	64.187	ENSMOCG00000019914	Trmt13	75	63.636	Microtus_ochrogaster
ENSCAPG00000009085	TRMT13	95	59.943	ENSMODG00000003646	TRMT13	72	59.375	Monodelphis_domestica
ENSCAPG00000009085	TRMT13	96	40.356	ENSMALG00000020965	trmt13	51	82.353	Monopterus_albus
ENSCAPG00000009085	TRMT13	100	66.667	MGP_CAROLIEiJ_G0025568	Trmt13	52	100.000	Mus_caroli
ENSCAPG00000009085	TRMT13	100	66.391	ENSMUSG00000033439	Trmt13	52	100.000	Mus_musculus
ENSCAPG00000009085	TRMT13	100	66.942	MGP_PahariEiJ_G0027014	Trmt13	59	89.189	Mus_pahari
ENSCAPG00000009085	TRMT13	100	66.667	MGP_SPRETEiJ_G0026518	Trmt13	53	97.059	Mus_spretus
ENSCAPG00000009085	TRMT13	81	71.525	ENSMPUG00000002078	-	61	83.929	Mustela_putorius_furo
ENSCAPG00000009085	TRMT13	100	59.945	ENSMLUG00000002124	TRMT13	75	58.564	Myotis_lucifugus
ENSCAPG00000009085	TRMT13	96	41.261	ENSNBRG00000006783	trmt13	73	38.109	Neolamprologus_brichardi
ENSCAPG00000009085	TRMT13	100	70.137	ENSNLEG00000035917	TRMT13	75	69.589	Nomascus_leucogenys
ENSCAPG00000009085	TRMT13	96	42.577	ENSONIG00000004574	trmt13	75	40.000	Oreochromis_niloticus
ENSCAPG00000009085	TRMT13	99	56.198	ENSOANG00000012057	TRMT13	83	55.647	Ornithorhynchus_anatinus
ENSCAPG00000009085	TRMT13	100	68.785	ENSOCUG00000023095	TRMT13	75	68.232	Oryctolagus_cuniculus
ENSCAPG00000009085	TRMT13	91	39.498	ENSORLG00000003320	trmt13	72	36.842	Oryzias_latipes
ENSCAPG00000009085	TRMT13	91	39.144	ENSORLG00020005972	trmt13	73	37.615	Oryzias_latipes_hni
ENSCAPG00000009085	TRMT13	95	39.714	ENSORLG00015002270	trmt13	75	38.068	Oryzias_latipes_hsok
ENSCAPG00000009085	TRMT13	90	40.653	ENSOMEG00000006724	trmt13	77	38.068	Oryzias_melastigma
ENSCAPG00000009085	TRMT13	100	70.685	ENSOGAG00000005618	TRMT13	73	70.137	Otolemur_garnettii
ENSCAPG00000009085	TRMT13	100	68.767	ENSOARG00000017983	TRMT13	75	68.219	Ovis_aries
ENSCAPG00000009085	TRMT13	100	70.411	ENSPPAG00000043736	TRMT13	75	69.863	Pan_paniscus
ENSCAPG00000009085	TRMT13	100	69.315	ENSPPRG00000003424	TRMT13	75	68.871	Panthera_pardus
ENSCAPG00000009085	TRMT13	100	69.315	ENSPTIG00000018598	TRMT13	75	68.871	Panthera_tigris_altaica
ENSCAPG00000009085	TRMT13	100	70.411	ENSPTRG00000001001	TRMT13	75	69.863	Pan_troglodytes
ENSCAPG00000009085	TRMT13	100	70.137	ENSPANG00000007598	TRMT13	87	69.589	Papio_anubis
ENSCAPG00000009085	TRMT13	97	45.584	ENSPKIG00000001514	trmt13	74	43.305	Paramormyrops_kingsleyae
ENSCAPG00000009085	TRMT13	97	53.911	ENSPSIG00000012703	TRMT13	86	53.352	Pelodiscus_sinensis
ENSCAPG00000009085	TRMT13	95	41.056	ENSPMGG00000013298	trmt13	71	41.049	Periophthalmus_magnuspinnatus
ENSCAPG00000009085	TRMT13	100	64.463	ENSPEMG00000000275	Trmt13	75	63.912	Peromyscus_maniculatus_bairdii
ENSCAPG00000009085	TRMT13	90	39.701	ENSPMAG00000000823	trmt13	68	39.403	Petromyzon_marinus
ENSCAPG00000009085	TRMT13	100	58.356	ENSPCIG00000007699	TRMT13	75	56.164	Phascolarctos_cinereus
ENSCAPG00000009085	TRMT13	94	41.449	ENSPFOG00000008675	trmt13	50	76.471	Poecilia_formosa
ENSCAPG00000009085	TRMT13	94	39.496	ENSPLAG00000009709	trmt13	53	76.471	Poecilia_latipinna
ENSCAPG00000009085	TRMT13	96	38.719	ENSPMEG00000022954	trmt13	53	76.471	Poecilia_mexicana
ENSCAPG00000009085	TRMT13	95	38.592	ENSPREG00000005645	trmt13	51	76.471	Poecilia_reticulata
ENSCAPG00000009085	TRMT13	100	70.137	ENSPPYG00000001120	TRMT13	75	69.589	Pongo_abelii
ENSCAPG00000009085	TRMT13	100	67.769	ENSPCAG00000002340	TRMT13	75	67.218	Procavia_capensis
ENSCAPG00000009085	TRMT13	100	69.972	ENSPCOG00000017984	TRMT13	75	69.421	Propithecus_coquereli
ENSCAPG00000009085	TRMT13	100	69.589	ENSPVAG00000017430	TRMT13	75	69.041	Pteropus_vampyrus
ENSCAPG00000009085	TRMT13	96	43.931	ENSPNYG00000013690	trmt13	74	43.881	Pundamilia_nyererei
ENSCAPG00000009085	TRMT13	99	43.716	ENSPNAG00000022130	trmt13	60	62.963	Pygocentrus_nattereri
ENSCAPG00000009085	TRMT13	100	66.116	ENSRNOG00000015140	Trmt13	73	65.565	Rattus_norvegicus
ENSCAPG00000009085	TRMT13	100	70.137	ENSRBIG00000037686	TRMT13	75	69.589	Rhinopithecus_bieti
ENSCAPG00000009085	TRMT13	100	71.955	ENSRROG00000044057	TRMT13	74	71.388	Rhinopithecus_roxellana
ENSCAPG00000009085	TRMT13	100	70.411	ENSSBOG00000026541	TRMT13	75	69.863	Saimiri_boliviensis_boliviensis
ENSCAPG00000009085	TRMT13	100	58.402	ENSSHAG00000005213	TRMT13	80	57.851	Sarcophilus_harrisii
ENSCAPG00000009085	TRMT13	89	46.951	ENSSFOG00015017560	trmt13	70	44.817	Scleropages_formosus
ENSCAPG00000009085	TRMT13	96	41.226	ENSSMAG00000014592	trmt13	80	38.352	Scophthalmus_maximus
ENSCAPG00000009085	TRMT13	96	39.503	ENSSDUG00000015508	trmt13	73	38.440	Seriola_dumerili
ENSCAPG00000009085	TRMT13	94	40.947	ENSSLDG00000019060	trmt13	73	39.276	Seriola_lalandi_dorsalis
ENSCAPG00000009085	TRMT13	100	56.749	ENSSARG00000010344	TRMT13	55	74.227	Sorex_araneus
ENSCAPG00000009085	TRMT13	99	53.994	ENSSPUG00000016339	TRMT13	79	53.168	Sphenodon_punctatus
ENSCAPG00000009085	TRMT13	96	40.793	ENSSPAG00000011922	trmt13	76	37.677	Stegastes_partitus
ENSCAPG00000009085	TRMT13	100	70.538	ENSSSCG00000006869	TRMT13	74	69.972	Sus_scrofa
ENSCAPG00000009085	TRMT13	95	51.734	ENSTGUG00000005253	TRMT13	74	49.711	Taeniopygia_guttata
ENSCAPG00000009085	TRMT13	99	39.889	ENSTRUG00000008400	trmt13	73	37.741	Takifugu_rubripes
ENSCAPG00000009085	TRMT13	96	52.137	ENSTBEG00000008911	TRMT13	84	52.137	Tupaia_belangeri
ENSCAPG00000009085	TRMT13	65	100.000	ENSTTRG00000015302	-	50	100.000	Tursiops_truncatus
ENSCAPG00000009085	TRMT13	100	68.786	ENSUAMG00000017251	TRMT13	74	65.896	Ursus_americanus
ENSCAPG00000009085	TRMT13	100	68.320	ENSUMAG00000007901	TRMT13	84	67.769	Ursus_maritimus
ENSCAPG00000009085	TRMT13	87	100.000	ENSVPAG00000001034	TRMT13	63	100.000	Vicugna_pacos
ENSCAPG00000009085	TRMT13	100	76.615	ENSVVUG00000021996	TRMT13	73	76.615	Vulpes_vulpes
ENSCAPG00000009085	TRMT13	95	46.957	ENSXETG00000013204	trmt13	73	44.928	Xenopus_tropicalis