EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000009294 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 37702 bases
Position: chrAVPZ01000178.1:26364061-26401762
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007378	ResIII	PF04851.15	2.4e-08	1	1
ENSCAPP00000007377	ResIII	PF04851.15	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011070	CHD5-202	5673	-	ENSCAPP00000007378	1890 (aa)	-	-
ENSCAPT00000011069	CHD5-201	5784	-	ENSCAPP00000007377	1927 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000009294	CHD5	98	67.275	ENSCAPG00000014864	CHD3	94	66.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009294	CHD5	99	95.374	ENSG00000116254	CHD5	99	95.381	Homo_sapiens
ENSCAPG00000009294	CHD5	99	94.444	ENSAMEG00000009880	CHD5	99	94.444	Ailuropoda_melanoleuca
ENSCAPG00000009294	CHD5	95	79.108	ENSACIG00000012582	chd5	98	79.341	Amphilophus_citrinellus
ENSCAPG00000009294	CHD5	95	80.328	ENSAOCG00000020356	chd5	90	80.230	Amphiprion_ocellaris
ENSCAPG00000009294	CHD5	96	82.141	ENSAPLG00000015475	CHD5	98	82.053	Anas_platyrhynchos
ENSCAPG00000009294	CHD5	100	82.103	ENSACAG00000002441	CHD5	99	81.795	Anolis_carolinensis
ENSCAPG00000009294	CHD5	88	95.506	ENSANAG00000001078	CHD5	91	95.506	Aotus_nancymaae
ENSCAPG00000009294	CHD5	95	75.978	ENSACLG00000003012	chd5	96	75.896	Astatotilapia_calliptera
ENSCAPG00000009294	CHD5	88	82.336	ENSAMXG00000008921	chd5	98	82.327	Astyanax_mexicanus
ENSCAPG00000009294	CHD5	94	95.765	ENSBTAG00000040477	CHD5	100	95.765	Bos_taurus
ENSCAPG00000009294	CHD5	99	95.374	ENSCJAG00000000101	CHD5	99	95.381	Callithrix_jacchus
ENSCAPG00000009294	CHD5	94	95.817	ENSCAFG00000019545	CHD5	100	95.817	Canis_familiaris
ENSCAPG00000009294	CHD5	99	95.385	ENSCAFG00020008689	CHD5	96	95.392	Canis_lupus_dingo
ENSCAPG00000009294	CHD5	99	94.078	ENSCHIG00000015027	CHD5	96	94.087	Capra_hircus
ENSCAPG00000009294	CHD5	99	90.155	ENSTSYG00000033991	CHD5	99	90.437	Carlito_syrichta
ENSCAPG00000009294	CHD5	100	99.947	ENSCPOG00000025080	CHD5	100	99.947	Cavia_porcellus
ENSCAPG00000009294	CHD5	99	95.322	ENSCCAG00000024756	CHD5	99	95.330	Cebus_capucinus
ENSCAPG00000009294	CHD5	99	94.595	ENSCATG00000043011	CHD5	99	94.603	Cercocebus_atys
ENSCAPG00000009294	CHD5	100	97.778	ENSCLAG00000010589	CHD5	100	97.778	Chinchilla_lanigera
ENSCAPG00000009294	CHD5	99	95.582	ENSCSAG00000000733	CHD5	99	95.589	Chlorocebus_sabaeus
ENSCAPG00000009294	CHD5	94	90.510	ENSCPBG00000019363	CHD5	100	90.400	Chrysemys_picta_bellii
ENSCAPG00000009294	CHD5	100	95.537	ENSCANG00000032302	CHD5	99	95.537	Colobus_angolensis_palliatus
ENSCAPG00000009294	CHD5	56	96.887	ENSCGRG00001011042	Chd5	100	96.887	Cricetulus_griseus_chok1gshd
ENSCAPG00000009294	CHD5	100	94.868	ENSCGRG00000011341	Chd5	100	94.180	Cricetulus_griseus_crigri
ENSCAPG00000009294	CHD5	98	78.526	ENSDARG00000105083	chd5	97	80.742	Danio_rerio
ENSCAPG00000009294	CHD5	95	67.970	ENSDARG00000025789	chd4b	93	69.273	Danio_rerio
ENSCAPG00000009294	CHD5	100	90.763	ENSDNOG00000046342	CHD5	99	90.659	Dasypus_novemcinctus
ENSCAPG00000009294	CHD5	100	95.029	ENSDORG00000005923	Chd5	100	95.029	Dipodomys_ordii
ENSCAPG00000009294	CHD5	99	93.627	ENSEASG00005021464	CHD5	97	93.531	Equus_asinus_asinus
ENSCAPG00000009294	CHD5	99	93.309	ENSECAG00000025043	CHD5	98	95.618	Equus_caballus
ENSCAPG00000009294	CHD5	78	98.140	ENSEEUG00000002772	CHD5	77	98.140	Erinaceus_europaeus
ENSCAPG00000009294	CHD5	95	77.230	ENSELUG00000010742	chd5	95	78.226	Esox_lucius
ENSCAPG00000009294	CHD5	99	95.060	ENSFCAG00000006319	CHD5	99	94.966	Felis_catus
ENSCAPG00000009294	CHD5	99	88.010	ENSFALG00000009740	CHD5	99	87.597	Ficedula_albicollis
ENSCAPG00000009294	CHD5	99	96.468	ENSFDAG00000012881	CHD5	96	95.897	Fukomys_damarensis
ENSCAPG00000009294	CHD5	100	88.153	ENSGALG00000000747	CHD5	99	87.739	Gallus_gallus
ENSCAPG00000009294	CHD5	57	83.180	ENSGACG00000004389	chd5	93	83.333	Gasterosteus_aculeatus
ENSCAPG00000009294	CHD5	97	87.620	ENSGAGG00000001590	CHD5	99	96.098	Gopherus_agassizii
ENSCAPG00000009294	CHD5	100	95.433	ENSGGOG00000000708	CHD5	100	95.433	Gorilla_gorilla
ENSCAPG00000009294	CHD5	95	76.784	ENSHBUG00000013453	chd5	96	76.703	Haplochromis_burtoni
ENSCAPG00000009294	CHD5	100	96.984	ENSHGLG00000018184	CHD5	100	96.806	Heterocephalus_glaber_female
ENSCAPG00000009294	CHD5	100	90.098	ENSHGLG00100013261	CHD5	97	90.098	Heterocephalus_glaber_male
ENSCAPG00000009294	CHD5	95	78.791	ENSIPUG00000005446	chd5	98	79.284	Ictalurus_punctatus
ENSCAPG00000009294	CHD5	100	96.032	ENSSTOG00000002778	CHD5	100	96.032	Ictidomys_tridecemlineatus
ENSCAPG00000009294	CHD5	99	95.495	ENSJJAG00000019072	Chd5	99	94.762	Jaculus_jaculus
ENSCAPG00000009294	CHD5	98	82.895	ENSLOCG00000004944	chd5	94	82.849	Lepisosteus_oculatus
ENSCAPG00000009294	CHD5	99	95.481	ENSLAFG00000006348	CHD5	99	95.481	Loxodonta_africana
ENSCAPG00000009294	CHD5	100	95.537	ENSMFAG00000033993	CHD5	100	95.817	Macaca_fascicularis
ENSCAPG00000009294	CHD5	100	95.485	ENSMMUG00000016838	CHD5	99	95.485	Macaca_mulatta
ENSCAPG00000009294	CHD5	99	95.582	ENSMNEG00000040044	CHD5	99	95.589	Macaca_nemestrina
ENSCAPG00000009294	CHD5	100	92.115	ENSMLEG00000039166	CHD5	100	92.115	Mandrillus_leucophaeus
ENSCAPG00000009294	CHD5	90	81.692	ENSMZEG00005000841	chd5	91	81.597	Maylandia_zebra
ENSCAPG00000009294	CHD5	99	87.894	ENSMGAG00000001055	CHD5	99	87.688	Meleagris_gallopavo
ENSCAPG00000009294	CHD5	99	92.104	ENSMICG00000017862	CHD5	99	91.909	Microcebus_murinus
ENSCAPG00000009294	CHD5	99	95.077	ENSMOCG00000011049	Chd5	99	94.339	Microtus_ochrogaster
ENSCAPG00000009294	CHD5	87	80.247	ENSMODG00000006294	CHD5	78	94.226	Monodelphis_domestica
ENSCAPG00000009294	CHD5	95	79.235	ENSMALG00000002831	chd5	96	78.325	Monopterus_albus
ENSCAPG00000009294	CHD5	99	94.649	MGP_CAROLIEiJ_G0026857	Chd5	99	94.655	Mus_caroli
ENSCAPG00000009294	CHD5	99	94.500	ENSMUSG00000005045	Chd5	99	94.242	Mus_musculus
ENSCAPG00000009294	CHD5	99	94.650	MGP_PahariEiJ_G0029205	Chd5	99	94.656	Mus_pahari
ENSCAPG00000009294	CHD5	99	94.756	MGP_SPRETEiJ_G0027850	Chd5	99	94.762	Mus_spretus
ENSCAPG00000009294	CHD5	100	91.495	ENSMPUG00000007122	CHD5	99	91.495	Mustela_putorius_furo
ENSCAPG00000009294	CHD5	99	94.390	ENSNGAG00000019812	Chd5	96	94.390	Nannospalax_galili
ENSCAPG00000009294	CHD5	100	93.046	ENSNLEG00000010320	CHD5	100	92.839	Nomascus_leucogenys
ENSCAPG00000009294	CHD5	88	90.494	ENSOPRG00000004304	CHD5	87	90.494	Ochotona_princeps
ENSCAPG00000009294	CHD5	100	97.143	ENSODEG00000010262	CHD5	100	97.143	Octodon_degus
ENSCAPG00000009294	CHD5	95	79.048	ENSONIG00000000619	chd5	93	78.907	Oreochromis_niloticus
ENSCAPG00000009294	CHD5	97	73.207	ENSOANG00000001819	CHD5	98	72.354	Ornithorhynchus_anatinus
ENSCAPG00000009294	CHD5	99	93.396	ENSOGAG00000005703	CHD5	99	93.406	Otolemur_garnettii
ENSCAPG00000009294	CHD5	98	94.230	ENSOARG00000013425	CHD5	98	94.230	Ovis_aries
ENSCAPG00000009294	CHD5	100	95.332	ENSPPAG00000034048	CHD5	100	95.332	Pan_paniscus
ENSCAPG00000009294	CHD5	99	94.384	ENSPPRG00000009453	CHD5	99	94.292	Panthera_pardus
ENSCAPG00000009294	CHD5	100	87.577	ENSPTIG00000013926	CHD5	99	87.628	Panthera_tigris_altaica
ENSCAPG00000009294	CHD5	99	95.325	ENSPTRG00000000075	CHD5	99	95.332	Pan_troglodytes
ENSCAPG00000009294	CHD5	99	95.530	ENSPANG00000006765	CHD5	99	95.537	Papio_anubis
ENSCAPG00000009294	CHD5	95	79.244	ENSPKIG00000004282	chd5	98	78.525	Paramormyrops_kingsleyae
ENSCAPG00000009294	CHD5	97	82.729	ENSPSIG00000006414	CHD5	99	82.927	Pelodiscus_sinensis
ENSCAPG00000009294	CHD5	69	96.757	ENSPEMG00000014799	Chd5	100	96.757	Peromyscus_maniculatus_bairdii
ENSCAPG00000009294	CHD5	100	91.313	ENSPCIG00000028310	CHD5	97	90.900	Phascolarctos_cinereus
ENSCAPG00000009294	CHD5	95	77.432	ENSPLAG00000005343	chd5	96	77.188	Poecilia_latipinna
ENSCAPG00000009294	CHD5	100	92.216	ENSPPYG00000001952	CHD5	100	92.216	Pongo_abelii
ENSCAPG00000009294	CHD5	99	95.790	ENSPCOG00000022930	CHD5	99	95.797	Propithecus_coquereli
ENSCAPG00000009294	CHD5	95	78.277	ENSPNYG00000003183	chd5	98	78.237	Pundamilia_nyererei
ENSCAPG00000009294	CHD5	100	94.710	ENSRNOG00000011268	Chd5	99	94.032	Rattus_norvegicus
ENSCAPG00000009294	CHD5	95	96.877	ENSRBIG00000032140	CHD5	95	96.877	Rhinopithecus_bieti
ENSCAPG00000009294	CHD5	100	95.381	ENSRROG00000041146	CHD5	99	95.381	Rhinopithecus_roxellana
ENSCAPG00000009294	CHD5	100	91.041	ENSSBOG00000001955	CHD5	99	95.476	Saimiri_boliviensis_boliviensis
ENSCAPG00000009294	CHD5	98	86.272	ENSSHAG00000018641	CHD5	99	86.304	Sarcophilus_harrisii
ENSCAPG00000009294	CHD5	98	78.347	ENSSFOG00015006296	chd5	96	76.878	Scleropages_formosus
ENSCAPG00000009294	CHD5	95	78.950	ENSSDUG00000017526	chd5	98	79.398	Seriola_dumerili
ENSCAPG00000009294	CHD5	98	81.911	ENSSPUG00000010622	CHD5	98	81.088	Sphenodon_punctatus
ENSCAPG00000009294	CHD5	98	95.488	ENSSSCG00000003366	CHD5	100	95.762	Sus_scrofa
ENSCAPG00000009294	CHD5	94	84.721	ENSTGUG00000002634	-	100	84.557	Taeniopygia_guttata
ENSCAPG00000009294	CHD5	54	80.528	ENSTNIG00000004346	chd5	99	81.219	Tetraodon_nigroviridis
ENSCAPG00000009294	CHD5	99	93.869	ENSTTRG00000010468	CHD5	99	93.895	Tursiops_truncatus
ENSCAPG00000009294	CHD5	99	95.236	ENSUAMG00000024509	CHD5	98	95.236	Ursus_americanus
ENSCAPG00000009294	CHD5	99	90.204	ENSUMAG00000024173	CHD5	98	91.504	Ursus_maritimus
ENSCAPG00000009294	CHD5	99	94.330	ENSVVUG00000026480	CHD5	98	95.122	Vulpes_vulpes
ENSCAPG00000009294	CHD5	98	80.578	ENSXETG00000002904	chd5	99	79.809	Xenopus_tropicalis
ENSCAPG00000009294	CHD5	58	83.871	ENSXCOG00000014202	chd5	94	83.871	Xiphophorus_couchianus