EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009343 (Gene tree)
Gene ID: -
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 107173 bases
Position: chrAVPZ01000078.1:24711589-24818761
Accession: 25543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007410	SHQ1	PF04925.15	2.4e-67	1	1
ENSCAPP00000007415	SHQ1	PF04925.15	3.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011102	SHQ1-201	1395	-	ENSCAPP00000007410	464 (aa)	-	-
ENSCAPT00000011107	SHQ1-202	1131	-	ENSCAPP00000007415	376 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009343	SHQ1	97	92.857	ENSG00000144736	SHQ1	100	88.393	Homo_sapiens
ENSCAPG00000009343	SHQ1	95	60.897	ENSAPOG00000000397	shq1	84	48.948	Acanthochromis_polyacanthus
ENSCAPG00000009343	SHQ1	96	92.208	ENSAMEG00000015140	SHQ1	64	92.208	Ailuropoda_melanoleuca
ENSCAPG00000009343	SHQ1	62	65.000	ENSACIG00000021249	shq1	84	47.471	Amphilophus_citrinellus
ENSCAPG00000009343	SHQ1	62	67.500	ENSAOCG00000023311	shq1	83	48.762	Amphiprion_ocellaris
ENSCAPG00000009343	SHQ1	95	62.821	ENSAPEG00000021686	shq1	83	48.654	Amphiprion_percula
ENSCAPG00000009343	SHQ1	63	67.500	ENSATEG00000008475	shq1	81	48.600	Anabas_testudineus
ENSCAPG00000009343	SHQ1	74	68.844	ENSAPLG00000013926	SHQ1	81	62.346	Anas_platyrhynchos
ENSCAPG00000009343	SHQ1	94	63.636	ENSACAG00000014809	SHQ1	70	59.877	Anolis_carolinensis
ENSCAPG00000009343	SHQ1	93	68.208	ENSANAG00000030500	-	89	56.735	Aotus_nancymaae
ENSCAPG00000009343	SHQ1	95	91.558	ENSANAG00000029241	SHQ1	90	67.829	Aotus_nancymaae
ENSCAPG00000009343	SHQ1	71	54.856	ENSACLG00000023077	shq1	87	44.891	Astatotilapia_calliptera
ENSCAPG00000009343	SHQ1	70	47.606	ENSAMXG00000043822	shq1	82	41.551	Astyanax_mexicanus
ENSCAPG00000009343	SHQ1	96	90.909	ENSBTAG00000005436	SHQ1	91	66.221	Bos_taurus
ENSCAPG00000009343	SHQ1	63	43.210	WBGene00021655	Y48A5A.1	80	33.811	Caenorhabditis_elegans
ENSCAPG00000009343	SHQ1	97	90.260	ENSCJAG00000015131	SHQ1	91	66.286	Callithrix_jacchus
ENSCAPG00000009343	SHQ1	96	94.156	ENSCAFG00000006434	SHQ1	64	94.156	Canis_familiaris
ENSCAPG00000009343	SHQ1	96	94.156	ENSCAFG00020016743	SHQ1	67	94.156	Canis_lupus_dingo
ENSCAPG00000009343	SHQ1	96	91.558	ENSCHIG00000012271	SHQ1	75	84.568	Capra_hircus
ENSCAPG00000009343	SHQ1	97	91.667	ENSTSYG00000014439	SHQ1	98	65.251	Carlito_syrichta
ENSCAPG00000009343	SHQ1	100	91.379	ENSCPOG00000011443	SHQ1	92	80.633	Cavia_porcellus
ENSCAPG00000009343	SHQ1	89	65.000	ENSCCAG00000027080	SHQ1	55	92.105	Cebus_capucinus
ENSCAPG00000009343	SHQ1	91	63.636	ENSCCAG00000036087	-	89	56.313	Cebus_capucinus
ENSCAPG00000009343	SHQ1	97	93.506	ENSCATG00000041238	SHQ1	95	67.238	Cercocebus_atys
ENSCAPG00000009343	SHQ1	98	96.753	ENSCLAG00000004206	SHQ1	92	71.751	Chinchilla_lanigera
ENSCAPG00000009343	SHQ1	86	89.381	ENSCSAG00000011514	SHQ1	99	64.463	Chlorocebus_sabaeus
ENSCAPG00000009343	SHQ1	51	93.333	ENSCHOG00000003273	-	84	93.333	Choloepus_hoffmanni
ENSCAPG00000009343	SHQ1	97	68.590	ENSCPBG00000006441	SHQ1	85	52.762	Chrysemys_picta_bellii
ENSCAPG00000009343	SHQ1	57	52.381	ENSCING00000008013	-	80	37.883	Ciona_intestinalis
ENSCAPG00000009343	SHQ1	52	62.791	ENSCSAVG00000002332	-	88	38.684	Ciona_savignyi
ENSCAPG00000009343	SHQ1	96	92.208	ENSCANG00000039295	SHQ1	91	67.366	Colobus_angolensis_palliatus
ENSCAPG00000009343	SHQ1	96	88.312	ENSCGRG00001012583	Shq1	82	82.099	Cricetulus_griseus_chok1gshd
ENSCAPG00000009343	SHQ1	96	88.312	ENSCGRG00000009849	Shq1	82	82.099	Cricetulus_griseus_crigri
ENSCAPG00000009343	SHQ1	57	67.742	ENSCSEG00000007829	shq1	84	48.302	Cynoglossus_semilaevis
ENSCAPG00000009343	SHQ1	65	65.000	ENSCVAG00000020049	shq1	87	46.899	Cyprinodon_variegatus
ENSCAPG00000009343	SHQ1	62	65.432	ENSDARG00000058522	shq1	78	44.694	Danio_rerio
ENSCAPG00000009343	SHQ1	97	92.857	ENSDNOG00000033937	SHQ1	90	67.235	Dasypus_novemcinctus
ENSCAPG00000009343	SHQ1	99	86.207	ENSETEG00000005766	SHQ1	81	86.207	Echinops_telfairi
ENSCAPG00000009343	SHQ1	53	59.649	ENSEBUG00000005445	shq1	73	44.136	Eptatretus_burgeri
ENSCAPG00000009343	SHQ1	97	91.558	ENSEASG00005002237	SHQ1	92	67.675	Equus_asinus_asinus
ENSCAPG00000009343	SHQ1	95	91.558	ENSECAG00000015673	SHQ1	88	67.630	Equus_caballus
ENSCAPG00000009343	SHQ1	96	88.312	ENSEEUG00000010568	SHQ1	90	65.709	Erinaceus_europaeus
ENSCAPG00000009343	SHQ1	50	78.788	ENSELUG00000003476	shq1	82	48.988	Esox_lucius
ENSCAPG00000009343	SHQ1	96	92.208	ENSFCAG00000012781	SHQ1	90	67.308	Felis_catus
ENSCAPG00000009343	SHQ1	96	69.677	ENSFALG00000013428	SHQ1	85	51.429	Ficedula_albicollis
ENSCAPG00000009343	SHQ1	98	90.909	ENSFDAG00000005595	SHQ1	85	67.336	Fukomys_damarensis
ENSCAPG00000009343	SHQ1	91	54.777	ENSFHEG00000017552	shq1	85	47.600	Fundulus_heteroclitus
ENSCAPG00000009343	SHQ1	52	73.171	ENSGMOG00000007350	shq1	88	51.176	Gadus_morhua
ENSCAPG00000009343	SHQ1	96	72.078	ENSGALG00000007798	SHQ1	85	51.341	Gallus_gallus
ENSCAPG00000009343	SHQ1	52	75.610	ENSGACG00000011797	shq1	88	53.097	Gasterosteus_aculeatus
ENSCAPG00000009343	SHQ1	97	91.558	ENSGGOG00000034818	SHQ1	95	66.857	Gorilla_gorilla
ENSCAPG00000009343	SHQ1	71	54.593	ENSHBUG00000010857	shq1	86	46.490	Haplochromis_burtoni
ENSCAPG00000009343	SHQ1	98	94.805	ENSHGLG00000003637	SHQ1	60	94.805	Heterocephalus_glaber_female
ENSCAPG00000009343	SHQ1	98	94.805	ENSHGLG00100011957	SHQ1	61	93.590	Heterocephalus_glaber_male
ENSCAPG00000009343	SHQ1	89	59.091	ENSHCOG00000010799	shq1	81	48.837	Hippocampus_comes
ENSCAPG00000009343	SHQ1	71	52.507	ENSIPUG00000001247	shq1	82	46.526	Ictalurus_punctatus
ENSCAPG00000009343	SHQ1	96	87.013	ENSSTOG00000010043	SHQ1	91	60.352	Ictidomys_tridecemlineatus
ENSCAPG00000009343	SHQ1	97	88.312	ENSJJAG00000017611	Shq1	91	65.377	Jaculus_jaculus
ENSCAPG00000009343	SHQ1	92	59.748	ENSKMAG00000004457	shq1	83	48.515	Kryptolebias_marmoratus
ENSCAPG00000009343	SHQ1	96	73.377	ENSLACG00000014243	SHQ1	80	50.943	Latimeria_chalumnae
ENSCAPG00000009343	SHQ1	95	65.161	ENSLOCG00000009970	shq1	90	47.013	Lepisosteus_oculatus
ENSCAPG00000009343	SHQ1	97	60.748	ENSMFAG00000037396	-	94	53.200	Macaca_fascicularis
ENSCAPG00000009343	SHQ1	97	93.506	ENSMFAG00000039148	SHQ1	95	67.238	Macaca_fascicularis
ENSCAPG00000009343	SHQ1	97	93.506	ENSMMUG00000009571	SHQ1	95	67.238	Macaca_mulatta
ENSCAPG00000009343	SHQ1	97	60.748	ENSMMUG00000021761	-	94	53.200	Macaca_mulatta
ENSCAPG00000009343	SHQ1	97	93.506	ENSMNEG00000032667	SHQ1	91	67.048	Macaca_nemestrina
ENSCAPG00000009343	SHQ1	97	92.857	ENSMLEG00000038493	SHQ1	91	66.857	Mandrillus_leucophaeus
ENSCAPG00000009343	SHQ1	92	59.236	ENSMAMG00000023432	shq1	79	48.728	Mastacembelus_armatus
ENSCAPG00000009343	SHQ1	71	54.856	ENSMZEG00005008649	shq1	86	46.679	Maylandia_zebra
ENSCAPG00000009343	SHQ1	96	72.078	ENSMGAG00000009640	SHQ1	85	49.237	Meleagris_gallopavo
ENSCAPG00000009343	SHQ1	96	88.312	ENSMAUG00000022030	Shq1	90	65.953	Mesocricetus_auratus
ENSCAPG00000009343	SHQ1	97	94.194	ENSMICG00000009224	SHQ1	69	94.839	Microcebus_murinus
ENSCAPG00000009343	SHQ1	97	85.897	ENSMOCG00000017836	Shq1	90	64.355	Microtus_ochrogaster
ENSCAPG00000009343	SHQ1	63	62.500	ENSMMOG00000010569	shq1	82	46.694	Mola_mola
ENSCAPG00000009343	SHQ1	94	70.833	ENSMODG00000003926	SHQ1	79	70.833	Monodelphis_domestica
ENSCAPG00000009343	SHQ1	95	59.873	ENSMALG00000008870	shq1	84	48.544	Monopterus_albus
ENSCAPG00000009343	SHQ1	96	88.312	MGP_CAROLIEiJ_G0028689	Shq1	90	64.491	Mus_caroli
ENSCAPG00000009343	SHQ1	96	87.662	ENSMUSG00000035378	Shq1	90	64.491	Mus_musculus
ENSCAPG00000009343	SHQ1	96	89.610	MGP_PahariEiJ_G0022440	Shq1	90	65.962	Mus_pahari
ENSCAPG00000009343	SHQ1	97	87.013	MGP_SPRETEiJ_G0029717	Shq1	90	64.231	Mus_spretus
ENSCAPG00000009343	SHQ1	96	90.260	ENSMPUG00000017006	SHQ1	89	65.835	Mustela_putorius_furo
ENSCAPG00000009343	SHQ1	96	88.462	ENSMLUG00000013539	SHQ1	98	61.509	Myotis_lucifugus
ENSCAPG00000009343	SHQ1	98	87.273	ENSNGAG00000023317	Shq1	72	87.273	Nannospalax_galili
ENSCAPG00000009343	SHQ1	63	53.824	ENSNBRG00000024004	shq1	90	45.992	Neolamprologus_brichardi
ENSCAPG00000009343	SHQ1	97	94.156	ENSNLEG00000002731	SHQ1	95	67.810	Nomascus_leucogenys
ENSCAPG00000009343	SHQ1	63	78.947	ENSMEUG00000009350	-	66	78.947	Notamacropus_eugenii
ENSCAPG00000009343	SHQ1	98	91.558	ENSODEG00000009192	SHQ1	91	69.171	Octodon_degus
ENSCAPG00000009343	SHQ1	71	54.593	ENSONIG00000020264	shq1	86	47.399	Oreochromis_niloticus
ENSCAPG00000009343	SHQ1	96	91.558	ENSOCUG00000016695	SHQ1	90	67.542	Oryctolagus_cuniculus
ENSCAPG00000009343	SHQ1	61	63.158	ENSORLG00000023538	shq1	87	46.185	Oryzias_latipes
ENSCAPG00000009343	SHQ1	98	47.012	ENSORLG00020003697	shq1	86	47.012	Oryzias_latipes_hni
ENSCAPG00000009343	SHQ1	61	64.474	ENSORLG00015021040	shq1	87	46.185	Oryzias_latipes_hsok
ENSCAPG00000009343	SHQ1	61	67.105	ENSOMEG00000001225	shq1	87	47.305	Oryzias_melastigma
ENSCAPG00000009343	SHQ1	96	94.805	ENSOGAG00000003898	SHQ1	65	94.805	Otolemur_garnettii
ENSCAPG00000009343	SHQ1	96	89.744	ENSOARG00000009547	SHQ1	83	82.927	Ovis_aries
ENSCAPG00000009343	SHQ1	97	93.506	ENSPPAG00000027714	SHQ1	95	67.429	Pan_paniscus
ENSCAPG00000009343	SHQ1	96	55.019	ENSPPAG00000043263	-	98	53.965	Pan_paniscus
ENSCAPG00000009343	SHQ1	96	92.208	ENSPPRG00000004769	SHQ1	90	67.885	Panthera_pardus
ENSCAPG00000009343	SHQ1	96	82.468	ENSPTIG00000011478	SHQ1	90	67.961	Panthera_tigris_altaica
ENSCAPG00000009343	SHQ1	97	93.506	ENSPTRG00000015106	SHQ1	95	67.429	Pan_troglodytes
ENSCAPG00000009343	SHQ1	96	55.859	ENSPTRG00000048303	-	98	54.795	Pan_troglodytes
ENSCAPG00000009343	SHQ1	97	89.610	ENSPANG00000002881	SHQ1	95	67.429	Papio_anubis
ENSCAPG00000009343	SHQ1	61	66.216	ENSPKIG00000021517	shq1	85	42.688	Paramormyrops_kingsleyae
ENSCAPG00000009343	SHQ1	96	68.387	ENSPSIG00000005536	SHQ1	78	63.580	Pelodiscus_sinensis
ENSCAPG00000009343	SHQ1	64	70.238	ENSPMGG00000008838	shq1	83	46.217	Periophthalmus_magnuspinnatus
ENSCAPG00000009343	SHQ1	96	87.662	ENSPEMG00000000251	Shq1	90	65.891	Peromyscus_maniculatus_bairdii
ENSCAPG00000009343	SHQ1	64	56.627	ENSPMAG00000005372	shq1	88	47.970	Petromyzon_marinus
ENSCAPG00000009343	SHQ1	63	65.000	ENSPFOG00000003118	shq1	88	46.976	Poecilia_formosa
ENSCAPG00000009343	SHQ1	52	65.000	ENSPMEG00000011076	shq1	96	45.695	Poecilia_mexicana
ENSCAPG00000009343	SHQ1	62	64.474	ENSPREG00000000591	shq1	92	46.327	Poecilia_reticulata
ENSCAPG00000009343	SHQ1	97	90.909	ENSPPYG00000013717	SHQ1	91	67.048	Pongo_abelii
ENSCAPG00000009343	SHQ1	93	88.961	ENSPCAG00000009035	SHQ1	91	66.859	Procavia_capensis
ENSCAPG00000009343	SHQ1	96	87.898	ENSPCOG00000008415	SHQ1	65	92.357	Propithecus_coquereli
ENSCAPG00000009343	SHQ1	97	90.260	ENSPVAG00000017392	SHQ1	91	67.495	Pteropus_vampyrus
ENSCAPG00000009343	SHQ1	71	54.856	ENSPNYG00000003878	shq1	86	47.206	Pundamilia_nyererei
ENSCAPG00000009343	SHQ1	61	63.158	ENSPNAG00000026840	shq1	82	45.972	Pygocentrus_nattereri
ENSCAPG00000009343	SHQ1	96	88.961	ENSRNOG00000005433	Shq1	98	60.277	Rattus_norvegicus
ENSCAPG00000009343	SHQ1	98	82.873	ENSRBIG00000026280	SHQ1	97	69.216	Rhinopithecus_bieti
ENSCAPG00000009343	SHQ1	96	92.857	ENSRROG00000034126	SHQ1	91	66.985	Rhinopithecus_roxellana
ENSCAPG00000009343	SHQ1	96	65.584	ENSSBOG00000021038	SHQ1	90	59.351	Saimiri_boliviensis_boliviensis
ENSCAPG00000009343	SHQ1	95	74.306	ENSSHAG00000015077	SHQ1	79	74.306	Sarcophilus_harrisii
ENSCAPG00000009343	SHQ1	94	59.091	ENSSFOG00015016241	shq1	82	49.489	Scleropages_formosus
ENSCAPG00000009343	SHQ1	95	62.329	ENSSMAG00000016151	shq1	73	62.329	Scophthalmus_maximus
ENSCAPG00000009343	SHQ1	95	62.658	ENSSDUG00000011986	shq1	87	46.992	Seriola_dumerili
ENSCAPG00000009343	SHQ1	95	60.897	ENSSLDG00000013908	shq1	87	47.059	Seriola_lalandi_dorsalis
ENSCAPG00000009343	SHQ1	85	79.221	ENSSARG00000007119	SHQ1	90	52.418	Sorex_araneus
ENSCAPG00000009343	SHQ1	86	73.276	ENSSPUG00000011526	-	84	61.654	Sphenodon_punctatus
ENSCAPG00000009343	SHQ1	97	92.208	ENSSSCG00000011518	SHQ1	91	66.476	Sus_scrofa
ENSCAPG00000009343	SHQ1	98	48.231	ENSTGUG00000009933	SHQ1	91	50.000	Taeniopygia_guttata
ENSCAPG00000009343	SHQ1	92	55.063	ENSTRUG00000009446	shq1	84	45.328	Takifugu_rubripes
ENSCAPG00000009343	SHQ1	67	50.000	ENSTNIG00000007354	shq1	88	50.000	Tetraodon_nigroviridis
ENSCAPG00000009343	SHQ1	65	87.500	ENSTBEG00000011295	SHQ1	60	61.033	Tupaia_belangeri
ENSCAPG00000009343	SHQ1	94	90.260	ENSTTRG00000005320	SHQ1	90	67.442	Tursiops_truncatus
ENSCAPG00000009343	SHQ1	97	82.682	ENSUMAG00000024031	SHQ1	89	72.455	Ursus_maritimus
ENSCAPG00000009343	SHQ1	96	63.871	ENSVPAG00000004880	SHQ1	99	59.810	Vicugna_pacos
ENSCAPG00000009343	SHQ1	96	93.506	ENSVVUG00000013906	SHQ1	64	93.506	Vulpes_vulpes
ENSCAPG00000009343	SHQ1	65	68.539	ENSXETG00000032215	shq1	74	53.422	Xenopus_tropicalis