EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009405 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 7467 bases
Position: chrAVPZ01000045.1:29820019-29827485
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007519	RRM_1	PF00076.22	2.8e-55	1	3
ENSCAPP00000007519	RRM_1	PF00076.22	2.8e-55	2	3
ENSCAPP00000007519	RRM_1	PF00076.22	2.8e-55	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011211	NCL-201	2052	-	ENSCAPP00000007519	683 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009405	NCL	91	78.528	ENSG00000115053	NCL	100	89.189	Homo_sapiens
ENSCAPG00000009405	NCL	61	89.749	ENSAMEG00000016289	NCL	91	78.931	Ailuropoda_melanoleuca
ENSCAPG00000009405	NCL	61	85.520	ENSANAG00000035814	-	99	77.949	Aotus_nancymaae
ENSCAPG00000009405	NCL	99	67.302	ENSANAG00000024378	-	85	69.925	Aotus_nancymaae
ENSCAPG00000009405	NCL	95	76.087	ENSBTAG00000016174	NCL	61	89.749	Bos_taurus
ENSCAPG00000009405	NCL	76	88.115	ENSBTAG00000050728	-	56	88.115	Bos_taurus
ENSCAPG00000009405	NCL	73	89.583	ENSBTAG00000026909	-	80	89.958	Bos_taurus
ENSCAPG00000009405	NCL	90	89.706	ENSBTAG00000051320	-	86	87.793	Bos_taurus
ENSCAPG00000009405	NCL	52	88.918	ENSCJAG00000013538	NCL	62	90.433	Callithrix_jacchus
ENSCAPG00000009405	NCL	100	80.532	ENSCAFG00000011037	NCL	91	79.358	Canis_familiaris
ENSCAPG00000009405	NCL	85	80.395	ENSCAFG00020023145	NCL	89	80.560	Canis_lupus_dingo
ENSCAPG00000009405	NCL	85	80.000	ENSCHIG00000010894	-	66	89.522	Capra_hircus
ENSCAPG00000009405	NCL	91	58.269	ENSCHIG00000012143	-	60	73.615	Capra_hircus
ENSCAPG00000009405	NCL	74	94.248	ENSCHIG00000021052	-	94	94.755	Capra_hircus
ENSCAPG00000009405	NCL	91	72.036	ENSCHIG00000026149	-	53	81.794	Capra_hircus
ENSCAPG00000009405	NCL	91	79.020	ENSTSYG00000004355	-	91	78.101	Carlito_syrichta
ENSCAPG00000009405	NCL	95	76.748	ENSTSYG00000029779	-	96	75.390	Carlito_syrichta
ENSCAPG00000009405	NCL	70	76.347	ENSTSYG00000036886	-	91	67.331	Carlito_syrichta
ENSCAPG00000009405	NCL	100	96.181	ENSCPOG00000001034	NCL	99	96.181	Cavia_porcellus
ENSCAPG00000009405	NCL	58	86.935	ENSCCAG00000000551	-	93	87.065	Cebus_capucinus
ENSCAPG00000009405	NCL	52	88.918	ENSCCAG00000021040	-	62	87.927	Cebus_capucinus
ENSCAPG00000009405	NCL	91	79.877	ENSCATG00000037033	NCL	62	90.433	Cercocebus_atys
ENSCAPG00000009405	NCL	100	88.028	ENSCLAG00000013080	NCL	99	88.451	Chinchilla_lanigera
ENSCAPG00000009405	NCL	52	88.684	ENSCSAG00000006660	NCL	95	90.205	Chlorocebus_sabaeus
ENSCAPG00000009405	NCL	60	71.034	ENSCHOG00000012860	NCL	78	73.810	Choloepus_hoffmanni
ENSCAPG00000009405	NCL	92	64.079	ENSCGRG00001022350	-	56	73.158	Cricetulus_griseus_chok1gshd
ENSCAPG00000009405	NCL	91	75.385	ENSCGRG00001024315	-	53	83.113	Cricetulus_griseus_chok1gshd
ENSCAPG00000009405	NCL	92	62.632	ENSCGRG00000000507	-	56	73.158	Cricetulus_griseus_crigri
ENSCAPG00000009405	NCL	86	77.706	ENSCGRG00000017894	-	54	83.113	Cricetulus_griseus_crigri
ENSCAPG00000009405	NCL	100	70.704	ENSDNOG00000046347	-	99	69.718	Dasypus_novemcinctus
ENSCAPG00000009405	NCL	91	78.779	ENSDNOG00000010783	-	91	78.015	Dasypus_novemcinctus
ENSCAPG00000009405	NCL	53	77.979	ENSDORG00000012513	-	55	77.979	Dipodomys_ordii
ENSCAPG00000009405	NCL	51	68.633	ENSDORG00000023596	-	53	68.633	Dipodomys_ordii
ENSCAPG00000009405	NCL	52	83.158	ENSETEG00000018937	-	53	83.113	Echinops_telfairi
ENSCAPG00000009405	NCL	70	62.431	ENSETEG00000008139	-	88	62.259	Echinops_telfairi
ENSCAPG00000009405	NCL	52	83.024	ENSETEG00000014756	-	86	83.113	Echinops_telfairi
ENSCAPG00000009405	NCL	61	56.757	ENSETEG00000008553	-	80	59.474	Echinops_telfairi
ENSCAPG00000009405	NCL	99	80.339	ENSEASG00005008488	NCL	94	96.786	Equus_asinus_asinus
ENSCAPG00000009405	NCL	91	78.234	ENSECAG00000021868	NCL	91	77.439	Equus_caballus
ENSCAPG00000009405	NCL	86	75.574	ENSEEUG00000005913	NCL	54	82.586	Erinaceus_europaeus
ENSCAPG00000009405	NCL	91	80.153	ENSFCAG00000027622	NCL	91	79.847	Felis_catus
ENSCAPG00000009405	NCL	91	82.975	ENSFDAG00000014291	NCL	92	82.362	Fukomys_damarensis
ENSCAPG00000009405	NCL	91	78.988	ENSGGOG00000004300	NCL	100	91.531	Gorilla_gorilla
ENSCAPG00000009405	NCL	78	85.909	ENSHGLG00000005133	-	92	76.224	Heterocephalus_glaber_female
ENSCAPG00000009405	NCL	91	85.100	ENSHGLG00000002031	-	99	85.935	Heterocephalus_glaber_female
ENSCAPG00000009405	NCL	91	75.116	ENSHGLG00000011069	-	55	82.804	Heterocephalus_glaber_female
ENSCAPG00000009405	NCL	91	85.538	ENSHGLG00100014537	-	99	85.493	Heterocephalus_glaber_male
ENSCAPG00000009405	NCL	54	75.959	ENSJJAG00000016165	Ncl	55	75.959	Jaculus_jaculus
ENSCAPG00000009405	NCL	91	67.543	ENSLAFG00000013061	NCL	90	64.869	Loxodonta_africana
ENSCAPG00000009405	NCL	91	79.294	ENSMFAG00000040385	NCL	62	90.433	Macaca_fascicularis
ENSCAPG00000009405	NCL	91	79.294	ENSMMUG00000018094	NCL	93	97.500	Macaca_mulatta
ENSCAPG00000009405	NCL	51	96.818	ENSMNEG00000023839	NCL	94	97.500	Macaca_nemestrina
ENSCAPG00000009405	NCL	91	79.724	ENSMLEG00000028935	NCL	62	90.433	Mandrillus_leucophaeus
ENSCAPG00000009405	NCL	82	79.339	ENSMICG00000029975	-	89	77.255	Microcebus_murinus
ENSCAPG00000009405	NCL	100	79.747	ENSMICG00000002538	-	91	77.692	Microcebus_murinus
ENSCAPG00000009405	NCL	91	72.657	MGP_CAROLIEiJ_G0014362	Ncl	53	80.739	Mus_caroli
ENSCAPG00000009405	NCL	91	71.736	ENSMUSG00000026234	Ncl	53	80.475	Mus_musculus
ENSCAPG00000009405	NCL	91	72.435	MGP_PahariEiJ_G0027599	Ncl	91	73.047	Mus_pahari
ENSCAPG00000009405	NCL	91	71.933	MGP_SPRETEiJ_G0015164	Ncl	91	72.546	Mus_spretus
ENSCAPG00000009405	NCL	91	78.560	ENSMLUG00000014547	NCL	53	88.918	Myotis_lucifugus
ENSCAPG00000009405	NCL	91	75.794	ENSNGAG00000002454	-	53	84.697	Nannospalax_galili
ENSCAPG00000009405	NCL	52	66.755	ENSNGAG00000006188	-	54	66.755	Nannospalax_galili
ENSCAPG00000009405	NCL	86	69.147	ENSNLEG00000014107	-	85	68.670	Nomascus_leucogenys
ENSCAPG00000009405	NCL	61	80.698	ENSODEG00000002441	-	85	87.712	Octodon_degus
ENSCAPG00000009405	NCL	91	82.353	ENSODEG00000003281	-	90	81.917	Octodon_degus
ENSCAPG00000009405	NCL	100	64.884	ENSODEG00000007803	-	100	63.993	Octodon_degus
ENSCAPG00000009405	NCL	64	86.486	ENSOGAG00000027852	NCL	83	86.486	Otolemur_garnettii
ENSCAPG00000009405	NCL	91	74.233	ENSOARG00000020709	-	56	86.911	Ovis_aries
ENSCAPG00000009405	NCL	62	70.787	ENSOARG00000004072	-	61	71.504	Ovis_aries
ENSCAPG00000009405	NCL	69	83.028	ENSOARG00000013710	-	64	86.280	Ovis_aries
ENSCAPG00000009405	NCL	75	83.505	ENSOARG00000013270	-	51	87.912	Ovis_aries
ENSCAPG00000009405	NCL	91	78.834	ENSPPAG00000011619	NCL	100	91.531	Pan_paniscus
ENSCAPG00000009405	NCL	91	80.428	ENSPPRG00000012603	NCL	91	80.275	Panthera_pardus
ENSCAPG00000009405	NCL	91	80.275	ENSPTIG00000010393	NCL	91	79.817	Panthera_tigris_altaica
ENSCAPG00000009405	NCL	91	79.939	ENSPTRG00000013025	NCL	100	91.857	Pan_troglodytes
ENSCAPG00000009405	NCL	91	79.294	ENSPANG00000010292	NCL	62	90.433	Papio_anubis
ENSCAPG00000009405	NCL	100	78.073	ENSPPYG00000013265	NCL	53	84.252	Pongo_abelii
ENSCAPG00000009405	NCL	91	74.613	ENSPCOG00000004160	-	85	81.481	Propithecus_coquereli
ENSCAPG00000009405	NCL	91	79.908	ENSPCOG00000003051	-	90	78.495	Propithecus_coquereli
ENSCAPG00000009405	NCL	91	79.908	ENSPVAG00000000297	NCL	62	90.205	Pteropus_vampyrus
ENSCAPG00000009405	NCL	91	74.351	ENSRNOG00000018273	Ncl	91	76.031	Rattus_norvegicus
ENSCAPG00000009405	NCL	91	74.847	ENSRBIG00000037525	-	54	86.280	Rhinopithecus_bieti
ENSCAPG00000009405	NCL	93	76.299	ENSRROG00000036103	-	79	95.480	Rhinopithecus_roxellana
ENSCAPG00000009405	NCL	91	79.141	ENSRROG00000028756	-	82	96.818	Rhinopithecus_roxellana
ENSCAPG00000009405	NCL	70	80.838	ENSSBOG00000027549	-	97	83.371	Saimiri_boliviensis_boliviensis
ENSCAPG00000009405	NCL	52	88.654	ENSSBOG00000029193	-	62	90.205	Saimiri_boliviensis_boliviensis
ENSCAPG00000009405	NCL	58	74.429	ENSSBOG00000023094	-	84	74.661	Saimiri_boliviensis_boliviensis
ENSCAPG00000009405	NCL	91	77.795	ENSSSCG00000016275	NCL	91	77.341	Sus_scrofa
ENSCAPG00000009405	NCL	64	75.071	ENSTBEG00000002469	-	66	74.857	Tupaia_belangeri
ENSCAPG00000009405	NCL	88	72.995	ENSTBEG00000001546	-	85	73.486	Tupaia_belangeri
ENSCAPG00000009405	NCL	91	78.648	ENSTTRG00000009094	NCL	53	86.508	Tursiops_truncatus
ENSCAPG00000009405	NCL	72	87.895	ENSUAMG00000005639	NCL	89	89.749	Ursus_americanus
ENSCAPG00000009405	NCL	61	89.749	ENSUMAG00000015789	NCL	91	79.263	Ursus_maritimus
ENSCAPG00000009405	NCL	67	74.783	ENSVPAG00000001796	NCL	68	74.783	Vicugna_pacos
ENSCAPG00000009405	NCL	100	78.702	ENSVVUG00000025564	NCL	99	78.561	Vulpes_vulpes