EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009459 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 31621 bases
Position: chrAVPZ01000256.1:20729010-20760630
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007640	RRM_4	PF10598.9	2e-48	1	1
ENSCAPP00000007640	U5_2-snRNA_bdg	PF10597.9	4.1e-74	1	1
ENSCAPP00000007640	PRO8NT	PF08082.11	2.7e-66	1	1
ENSCAPP00000007640	U6-snRNA_bdg	PF10596.9	9.9e-90	1	1
ENSCAPP00000007640	PROCN	PF08083.11	1e-235	1	1
ENSCAPP00000007640	PRP8_domainIV	PF12134.8	2.3e-106	1	1
ENSCAPP00000007640	PROCT	PF08084.11	3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011333	PRPF8-201	6771	-	ENSCAPP00000007640	2256 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009459	PRPF8	99	97.773	ENSG00000174231	PRPF8	96	97.773	Homo_sapiens
ENSCAPG00000009459	PRPF8	99	96.036	ENSAPOG00000010079	prpf8	96	96.036	Acanthochromis_polyacanthus
ENSCAPG00000009459	PRPF8	99	97.773	ENSAMEG00000007940	PRPF8	96	97.773	Ailuropoda_melanoleuca
ENSCAPG00000009459	PRPF8	99	94.533	ENSACIG00000018280	prpf8	96	94.533	Amphilophus_citrinellus
ENSCAPG00000009459	PRPF8	99	96.036	ENSAOCG00000010725	prpf8	96	96.036	Amphiprion_ocellaris
ENSCAPG00000009459	PRPF8	99	96.036	ENSAPEG00000014397	prpf8	96	96.036	Amphiprion_percula
ENSCAPG00000009459	PRPF8	99	95.457	ENSATEG00000010062	prpf8	96	95.457	Anabas_testudineus
ENSCAPG00000009459	PRPF8	99	97.331	ENSAPLG00000010357	PRPF8	100	97.331	Anas_platyrhynchos
ENSCAPG00000009459	PRPF8	82	95.896	ENSACAG00000014784	PRPF8	95	95.896	Anolis_carolinensis
ENSCAPG00000009459	PRPF8	99	97.773	ENSANAG00000032629	PRPF8	96	97.773	Aotus_nancymaae
ENSCAPG00000009459	PRPF8	99	96.080	ENSACLG00000020858	prpf8	97	96.080	Astatotilapia_calliptera
ENSCAPG00000009459	PRPF8	99	95.857	ENSAMXG00000020291	prpf8	96	95.857	Astyanax_mexicanus
ENSCAPG00000009459	PRPF8	99	97.773	ENSBTAG00000011488	PRPF8	96	97.773	Bos_taurus
ENSCAPG00000009459	PRPF8	99	85.162	WBGene00004187	prp-8	97	85.251	Caenorhabditis_elegans
ENSCAPG00000009459	PRPF8	99	97.773	ENSCJAG00000001911	PRPF8	96	97.773	Callithrix_jacchus
ENSCAPG00000009459	PRPF8	99	97.773	ENSCAFG00000019221	PRPF8	96	97.773	Canis_familiaris
ENSCAPG00000009459	PRPF8	99	97.769	ENSCAFG00020009943	PRPF8	100	97.769	Canis_lupus_dingo
ENSCAPG00000009459	PRPF8	99	97.773	ENSCHIG00000017499	PRPF8	96	97.773	Capra_hircus
ENSCAPG00000009459	PRPF8	99	97.773	ENSTSYG00000014120	PRPF8	96	97.773	Carlito_syrichta
ENSCAPG00000009459	PRPF8	99	97.773	ENSCPOG00000010379	PRPF8	96	97.773	Cavia_porcellus
ENSCAPG00000009459	PRPF8	99	97.773	ENSCCAG00000031983	-	96	97.773	Cebus_capucinus
ENSCAPG00000009459	PRPF8	99	97.773	ENSCATG00000038595	PRPF8	96	97.773	Cercocebus_atys
ENSCAPG00000009459	PRPF8	99	97.773	ENSCLAG00000004388	PRPF8	96	97.773	Chinchilla_lanigera
ENSCAPG00000009459	PRPF8	99	97.773	ENSCSAG00000013929	PRPF8	96	97.773	Chlorocebus_sabaeus
ENSCAPG00000009459	PRPF8	80	99.656	ENSCHOG00000008590	PRPF8	84	99.656	Choloepus_hoffmanni
ENSCAPG00000009459	PRPF8	99	97.461	ENSCPBG00000020409	PRPF8	96	97.461	Chrysemys_picta_bellii
ENSCAPG00000009459	PRPF8	99	92.874	ENSCSAVG00000007825	-	98	89.138	Ciona_savignyi
ENSCAPG00000009459	PRPF8	99	97.773	ENSCANG00000043088	PRPF8	96	97.773	Colobus_angolensis_palliatus
ENSCAPG00000009459	PRPF8	76	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSCAPG00000009459	PRPF8	99	95.902	ENSCSEG00000007905	prpf8	96	95.902	Cynoglossus_semilaevis
ENSCAPG00000009459	PRPF8	99	95.991	ENSDARG00000026180	prpf8	96	95.991	Danio_rerio
ENSCAPG00000009459	PRPF8	92	98.319	ENSDNOG00000018471	PRPF8	95	98.319	Dasypus_novemcinctus
ENSCAPG00000009459	PRPF8	82	99.393	ENSDORG00000006185	Prpf8	91	99.393	Dipodomys_ordii
ENSCAPG00000009459	PRPF8	99	90.031	FBgn0033688	Prp8	94	90.031	Drosophila_melanogaster
ENSCAPG00000009459	PRPF8	99	92.116	ENSETEG00000017592	PRPF8	96	92.116	Echinops_telfairi
ENSCAPG00000009459	PRPF8	99	92.119	ENSEBUG00000006548	prpf8	96	92.119	Eptatretus_burgeri
ENSCAPG00000009459	PRPF8	99	97.773	ENSEASG00005009514	PRPF8	94	99.937	Equus_asinus_asinus
ENSCAPG00000009459	PRPF8	99	97.773	ENSECAG00000021318	PRPF8	99	97.773	Equus_caballus
ENSCAPG00000009459	PRPF8	66	100.000	ENSEEUG00000012120	-	64	100.000	Erinaceus_europaeus
ENSCAPG00000009459	PRPF8	97	94.670	ENSELUG00000007120	prpf8	95	94.670	Esox_lucius
ENSCAPG00000009459	PRPF8	99	97.773	ENSFCAG00000006297	PRPF8	96	97.773	Felis_catus
ENSCAPG00000009459	PRPF8	99	97.461	ENSFALG00000006628	PRPF8	96	97.461	Ficedula_albicollis
ENSCAPG00000009459	PRPF8	99	97.773	ENSFDAG00000004711	PRPF8	96	97.773	Fukomys_damarensis
ENSCAPG00000009459	PRPF8	99	95.679	ENSFHEG00000021084	prpf8	96	95.679	Fundulus_heteroclitus
ENSCAPG00000009459	PRPF8	99	93.615	ENSGMOG00000002028	prpf8	96	93.615	Gadus_morhua
ENSCAPG00000009459	PRPF8	99	97.461	ENSGALG00000002943	PRPF8	96	97.461	Gallus_gallus
ENSCAPG00000009459	PRPF8	99	95.813	ENSGAFG00000010337	prpf8	96	95.813	Gambusia_affinis
ENSCAPG00000009459	PRPF8	99	95.768	ENSGACG00000008504	prpf8	96	95.768	Gasterosteus_aculeatus
ENSCAPG00000009459	PRPF8	99	97.461	ENSGAGG00000008350	PRPF8	96	97.461	Gopherus_agassizii
ENSCAPG00000009459	PRPF8	99	97.773	ENSGGOG00000005516	PRPF8	96	97.773	Gorilla_gorilla
ENSCAPG00000009459	PRPF8	99	96.125	ENSHBUG00000016192	prpf8	96	96.125	Haplochromis_burtoni
ENSCAPG00000009459	PRPF8	99	97.773	ENSHGLG00000012029	PRPF8	96	97.773	Heterocephalus_glaber_female
ENSCAPG00000009459	PRPF8	99	97.773	ENSHGLG00100016494	PRPF8	96	97.773	Heterocephalus_glaber_male
ENSCAPG00000009459	PRPF8	99	95.857	ENSHCOG00000016414	prpf8	96	95.857	Hippocampus_comes
ENSCAPG00000009459	PRPF8	99	95.813	ENSIPUG00000023230	prpf8	96	95.813	Ictalurus_punctatus
ENSCAPG00000009459	PRPF8	99	97.773	ENSSTOG00000005128	PRPF8	96	97.773	Ictidomys_tridecemlineatus
ENSCAPG00000009459	PRPF8	99	95.501	ENSJJAG00000021159	Prpf8	96	95.501	Jaculus_jaculus
ENSCAPG00000009459	PRPF8	99	95.947	ENSKMAG00000016118	prpf8	96	95.947	Kryptolebias_marmoratus
ENSCAPG00000009459	PRPF8	99	95.724	ENSLBEG00000026903	prpf8	96	95.724	Labrus_bergylta
ENSCAPG00000009459	PRPF8	92	96.908	ENSLACG00000010479	PRPF8	99	96.908	Latimeria_chalumnae
ENSCAPG00000009459	PRPF8	99	96.037	ENSLOCG00000005409	prpf8	96	96.037	Lepisosteus_oculatus
ENSCAPG00000009459	PRPF8	99	97.773	ENSLAFG00000015445	PRPF8	96	97.773	Loxodonta_africana
ENSCAPG00000009459	PRPF8	99	97.773	ENSMFAG00000039995	PRPF8	96	97.773	Macaca_fascicularis
ENSCAPG00000009459	PRPF8	99	97.773	ENSMMUG00000004820	PRPF8	96	97.773	Macaca_mulatta
ENSCAPG00000009459	PRPF8	99	97.773	ENSMNEG00000035713	PRPF8	96	97.773	Macaca_nemestrina
ENSCAPG00000009459	PRPF8	99	97.773	ENSMLEG00000037937	PRPF8	96	97.773	Mandrillus_leucophaeus
ENSCAPG00000009459	PRPF8	99	95.947	ENSMAMG00000008919	prpf8	96	95.947	Mastacembelus_armatus
ENSCAPG00000009459	PRPF8	99	96.080	ENSMZEG00005015073	prpf8	96	96.080	Maylandia_zebra
ENSCAPG00000009459	PRPF8	99	97.461	ENSMGAG00000004769	PRPF8	96	97.461	Meleagris_gallopavo
ENSCAPG00000009459	PRPF8	99	97.728	ENSMICG00000010320	PRPF8	96	97.728	Microcebus_murinus
ENSCAPG00000009459	PRPF8	99	97.728	ENSMOCG00000016838	Prpf8	96	97.728	Microtus_ochrogaster
ENSCAPG00000009459	PRPF8	99	95.501	ENSMMOG00000011887	prpf8	96	95.501	Mola_mola
ENSCAPG00000009459	PRPF8	99	97.639	ENSMODG00000010480	PRPF8	96	97.639	Monodelphis_domestica
ENSCAPG00000009459	PRPF8	96	94.872	ENSMALG00000003558	prpf8	96	94.872	Monopterus_albus
ENSCAPG00000009459	PRPF8	99	97.684	MGP_CAROLIEiJ_G0016740	Prpf8	96	97.684	Mus_caroli
ENSCAPG00000009459	PRPF8	99	97.684	ENSMUSG00000020850	Prpf8	96	97.684	Mus_musculus
ENSCAPG00000009459	PRPF8	99	97.595	MGP_PahariEiJ_G0017877	Prpf8	96	97.595	Mus_pahari
ENSCAPG00000009459	PRPF8	99	97.684	MGP_SPRETEiJ_G0017583	Prpf8	96	97.684	Mus_spretus
ENSCAPG00000009459	PRPF8	99	97.773	ENSMPUG00000013227	PRPF8	96	97.773	Mustela_putorius_furo
ENSCAPG00000009459	PRPF8	99	97.553	ENSMLUG00000002666	PRPF8	96	97.553	Myotis_lucifugus
ENSCAPG00000009459	PRPF8	99	95.902	ENSNGAG00000005305	Prpf8	96	95.902	Nannospalax_galili
ENSCAPG00000009459	PRPF8	99	96.125	ENSNBRG00000013127	prpf8	96	96.125	Neolamprologus_brichardi
ENSCAPG00000009459	PRPF8	96	94.579	ENSNLEG00000000897	PRPF8	94	94.579	Nomascus_leucogenys
ENSCAPG00000009459	PRPF8	99	95.768	ENSMEUG00000015999	PRPF8	98	95.768	Notamacropus_eugenii
ENSCAPG00000009459	PRPF8	99	97.461	ENSOPRG00000003102	PRPF8	96	97.461	Ochotona_princeps
ENSCAPG00000009459	PRPF8	99	97.773	ENSODEG00000008468	PRPF8	96	97.773	Octodon_degus
ENSCAPG00000009459	PRPF8	99	96.169	ENSONIG00000008153	prpf8	96	96.169	Oreochromis_niloticus
ENSCAPG00000009459	PRPF8	85	99.645	ENSOANG00000004250	PRPF8	97	99.645	Ornithorhynchus_anatinus
ENSCAPG00000009459	PRPF8	99	97.773	ENSOCUG00000000081	PRPF8	96	97.773	Oryctolagus_cuniculus
ENSCAPG00000009459	PRPF8	99	95.902	ENSORLG00000008036	prpf8	96	95.859	Oryzias_latipes
ENSCAPG00000009459	PRPF8	99	95.859	ENSORLG00020021070	prpf8	95	95.859	Oryzias_latipes_hni
ENSCAPG00000009459	PRPF8	99	95.902	ENSORLG00015002340	prpf8	95	95.902	Oryzias_latipes_hsok
ENSCAPG00000009459	PRPF8	99	94.254	ENSOMEG00000016866	prpf8	95	94.254	Oryzias_melastigma
ENSCAPG00000009459	PRPF8	99	97.642	ENSOARG00000013312	PRPF8	96	97.642	Ovis_aries
ENSCAPG00000009459	PRPF8	99	97.773	ENSPPAG00000042753	PRPF8	96	97.773	Pan_paniscus
ENSCAPG00000009459	PRPF8	99	97.773	ENSPPRG00000008746	PRPF8	96	97.773	Panthera_pardus
ENSCAPG00000009459	PRPF8	99	97.684	ENSPTIG00000019200	PRPF8	96	97.684	Panthera_tigris_altaica
ENSCAPG00000009459	PRPF8	99	97.773	ENSPTRG00000039576	PRPF8	96	97.773	Pan_troglodytes
ENSCAPG00000009459	PRPF8	99	97.773	ENSPANG00000024607	PRPF8	96	97.773	Papio_anubis
ENSCAPG00000009459	PRPF8	99	96.125	ENSPKIG00000011201	prpf8	96	96.125	Paramormyrops_kingsleyae
ENSCAPG00000009459	PRPF8	99	97.416	ENSPSIG00000013393	PRPF8	96	97.416	Pelodiscus_sinensis
ENSCAPG00000009459	PRPF8	99	97.728	ENSPEMG00000021699	Prpf8	96	97.728	Peromyscus_maniculatus_bairdii
ENSCAPG00000009459	PRPF8	99	91.626	ENSPMAG00000005438	prpf8	100	91.670	Petromyzon_marinus
ENSCAPG00000009459	PRPF8	99	97.639	ENSPCIG00000022603	PRPF8	100	97.635	Phascolarctos_cinereus
ENSCAPG00000009459	PRPF8	99	95.947	ENSPFOG00000007005	prpf8	95	95.947	Poecilia_formosa
ENSCAPG00000009459	PRPF8	99	94.477	ENSPLAG00000020777	prpf8	96	94.477	Poecilia_latipinna
ENSCAPG00000009459	PRPF8	99	95.947	ENSPMEG00000004051	prpf8	95	95.947	Poecilia_mexicana
ENSCAPG00000009459	PRPF8	99	95.768	ENSPREG00000021902	prpf8	96	95.768	Poecilia_reticulata
ENSCAPG00000009459	PRPF8	99	97.773	ENSPPYG00000007777	PRPF8	96	97.773	Pongo_abelii
ENSCAPG00000009459	PRPF8	89	99.605	ENSPCAG00000008938	PRPF8	86	99.605	Procavia_capensis
ENSCAPG00000009459	PRPF8	99	97.728	ENSPCOG00000015182	PRPF8	96	97.728	Propithecus_coquereli
ENSCAPG00000009459	PRPF8	92	100.000	ENSPVAG00000002134	PRPF8	89	100.000	Pteropus_vampyrus
ENSCAPG00000009459	PRPF8	99	96.125	ENSPNYG00000016356	prpf8	96	96.125	Pundamilia_nyererei
ENSCAPG00000009459	PRPF8	99	95.947	ENSPNAG00000009247	prpf8	96	95.947	Pygocentrus_nattereri
ENSCAPG00000009459	PRPF8	99	97.684	ENSRNOG00000003495	Prpf8	96	97.684	Rattus_norvegicus
ENSCAPG00000009459	PRPF8	99	97.773	ENSRBIG00000031219	PRPF8	100	97.323	Rhinopithecus_bieti
ENSCAPG00000009459	PRPF8	99	97.773	ENSRROG00000038014	PRPF8	100	97.323	Rhinopithecus_roxellana
ENSCAPG00000009459	PRPF8	99	61.909	YHR165C	PRP8	93	61.953	Saccharomyces_cerevisiae
ENSCAPG00000009459	PRPF8	99	97.773	ENSSBOG00000029717	PRPF8	96	97.773	Saimiri_boliviensis_boliviensis
ENSCAPG00000009459	PRPF8	99	97.595	ENSSHAG00000006167	PRPF8	96	97.595	Sarcophilus_harrisii
ENSCAPG00000009459	PRPF8	99	95.991	ENSSFOG00015013905	prpf8	96	95.991	Scleropages_formosus
ENSCAPG00000009459	PRPF8	99	95.768	ENSSMAG00000017736	prpf8	96	95.768	Scophthalmus_maximus
ENSCAPG00000009459	PRPF8	99	96.036	ENSSDUG00000003029	prpf8	96	96.036	Seriola_dumerili
ENSCAPG00000009459	PRPF8	71	95.807	ENSSLDG00000017096	prpf8	100	95.807	Seriola_lalandi_dorsalis
ENSCAPG00000009459	PRPF8	86	99.299	ENSSARG00000002892	PRPF8	83	99.299	Sorex_araneus
ENSCAPG00000009459	PRPF8	99	97.238	ENSSPUG00000007463	PRPF8	96	97.238	Sphenodon_punctatus
ENSCAPG00000009459	PRPF8	99	95.412	ENSSPAG00000015639	prpf8	96	95.412	Stegastes_partitus
ENSCAPG00000009459	PRPF8	99	97.773	ENSSSCG00000017817	PRPF8	96	97.773	Sus_scrofa
ENSCAPG00000009459	PRPF8	53	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSCAPG00000009459	PRPF8	99	97.461	ENSTGUG00000005648	-	96	97.461	Taeniopygia_guttata
ENSCAPG00000009459	PRPF8	99	95.768	ENSTRUG00000015906	prpf8	96	95.768	Takifugu_rubripes
ENSCAPG00000009459	PRPF8	94	95.759	ENSTNIG00000003460	prpf8	95	95.759	Tetraodon_nigroviridis
ENSCAPG00000009459	PRPF8	92	99.932	ENSTBEG00000006431	PRPF8	89	99.932	Tupaia_belangeri
ENSCAPG00000009459	PRPF8	99	97.149	ENSTTRG00000006869	PRPF8	96	97.149	Tursiops_truncatus
ENSCAPG00000009459	PRPF8	52	99.320	ENSUAMG00000015644	-	89	99.320	Ursus_americanus
ENSCAPG00000009459	PRPF8	99	97.506	ENSUMAG00000009385	PRPF8	96	97.506	Ursus_maritimus
ENSCAPG00000009459	PRPF8	70	100.000	ENSVPAG00000006063	-	67	100.000	Vicugna_pacos
ENSCAPG00000009459	PRPF8	99	97.773	ENSVVUG00000021695	PRPF8	95	97.773	Vulpes_vulpes
ENSCAPG00000009459	PRPF8	99	96.883	ENSXETG00000022259	prpf8	96	96.883	Xenopus_tropicalis
ENSCAPG00000009459	PRPF8	99	95.857	ENSXCOG00000012775	prpf8	96	95.857	Xiphophorus_couchianus
ENSCAPG00000009459	PRPF8	99	95.813	ENSXMAG00000008505	prpf8	96	95.813	Xiphophorus_maculatus