EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009461 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1471 bases
Position: chrAVPZ01000045.1:17513734-17515204
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007557	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011249	-	423	-	ENSCAPP00000007557	140 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009461	-	100	99.286	ENSG00000100836	PABPN1	99	100.000	Homo_sapiens
ENSCAPG00000009461	-	99	81.295	ENSAPOG00000016425	pabpn1	59	81.295	Acanthochromis_polyacanthus
ENSCAPG00000009461	-	99	99.275	ENSAMEG00000007048	BCL2L2-PABPN1	73	99.275	Ailuropoda_melanoleuca
ENSCAPG00000009461	-	96	82.963	ENSACIG00000021744	pabpn1	78	82.014	Amphilophus_citrinellus
ENSCAPG00000009461	-	92	83.721	ENSAOCG00000015805	pabpn1	59	81.295	Amphiprion_ocellaris
ENSCAPG00000009461	-	92	83.721	ENSAPEG00000009623	pabpn1	59	81.295	Amphiprion_percula
ENSCAPG00000009461	-	92	84.496	ENSATEG00000020531	pabpn1	59	82.014	Anabas_testudineus
ENSCAPG00000009461	-	99	99.275	ENSANAG00000024513	-	50	99.275	Aotus_nancymaae
ENSCAPG00000009461	-	99	83.453	ENSAMXG00000000452	pabpn1	79	83.453	Astyanax_mexicanus
ENSCAPG00000009461	-	91	94.531	ENSBTAG00000050594	-	51	94.531	Bos_taurus
ENSCAPG00000009461	-	99	97.101	ENSBTAG00000053753	-	51	97.101	Bos_taurus
ENSCAPG00000009461	-	69	73.958	WBGene00003904	pabp-2	64	61.481	Caenorhabditis_elegans
ENSCAPG00000009461	-	99	99.275	ENSCJAG00000007960	-	51	99.275	Callithrix_jacchus
ENSCAPG00000009461	-	99	97.101	ENSCJAG00000004407	-	69	97.101	Callithrix_jacchus
ENSCAPG00000009461	-	99	99.275	ENSTSYG00000033996	BCL2L2-PABPN1	78	99.275	Carlito_syrichta
ENSCAPG00000009461	-	99	99.275	ENSCCAG00000033954	BCL2L2-PABPN1	51	99.275	Cebus_capucinus
ENSCAPG00000009461	-	99	99.275	ENSCATG00000038536	BCL2L2-PABPN1	51	99.275	Cercocebus_atys
ENSCAPG00000009461	-	99	100.000	ENSCLAG00000012423	PABPN1	52	100.000	Chinchilla_lanigera
ENSCAPG00000009461	-	99	88.406	ENSCHOG00000004798	BCL2L2-PABPN1	59	88.406	Choloepus_hoffmanni
ENSCAPG00000009461	-	99	90.580	ENSCPBG00000026060	-	78	90.580	Chrysemys_picta_bellii
ENSCAPG00000009461	-	94	65.152	ENSCING00000012468	-	59	65.152	Ciona_intestinalis
ENSCAPG00000009461	-	94	61.364	ENSCSAVG00000002001	-	79	61.364	Ciona_savignyi
ENSCAPG00000009461	-	99	99.275	ENSCANG00000009750	BCL2L2-PABPN1	78	99.275	Colobus_angolensis_palliatus
ENSCAPG00000009461	-	99	98.551	ENSCGRG00001019696	Pabpn1	78	98.551	Cricetulus_griseus_chok1gshd
ENSCAPG00000009461	-	99	98.551	ENSCGRG00000011102	Pabpn1	78	98.551	Cricetulus_griseus_crigri
ENSCAPG00000009461	-	96	82.963	ENSCSEG00000008774	pabpn1	58	82.963	Cynoglossus_semilaevis
ENSCAPG00000009461	-	94	78.030	ENSCVAG00000003152	pabpn1	60	79.856	Cyprinodon_variegatus
ENSCAPG00000009461	-	99	82.734	ENSDARG00000045373	pabpn1	64	82.734	Danio_rerio
ENSCAPG00000009461	-	70	74.490	ENSDARG00000087996	pabpn1l	60	74.490	Danio_rerio
ENSCAPG00000009461	-	75	92.381	ENSDORG00000023928	-	73	92.381	Dipodomys_ordii
ENSCAPG00000009461	-	97	63.235	FBgn0005648	Pabp2	59	63.235	Drosophila_melanogaster
ENSCAPG00000009461	-	99	77.698	ENSEBUG00000002322	pabpn1	60	77.698	Eptatretus_burgeri
ENSCAPG00000009461	-	91	89.062	ENSELUG00000022654	pabpn1	59	85.612	Esox_lucius
ENSCAPG00000009461	-	99	100.000	ENSFDAG00000018381	BCL2L2-PABPN1	78	100.000	Fukomys_damarensis
ENSCAPG00000009461	-	91	82.812	ENSFHEG00000007215	pabpn1	59	79.856	Fundulus_heteroclitus
ENSCAPG00000009461	-	91	84.496	ENSGAFG00000017099	pabpn1	60	81.429	Gambusia_affinis
ENSCAPG00000009461	-	99	79.856	ENSGACG00000002167	pabpn1	61	76.000	Gasterosteus_aculeatus
ENSCAPG00000009461	-	99	84.058	ENSGGOG00000025919	-	90	83.088	Gorilla_gorilla
ENSCAPG00000009461	-	99	99.275	ENSGGOG00000022683	-	51	99.275	Gorilla_gorilla
ENSCAPG00000009461	-	91	85.156	ENSHBUG00000019523	pabpn1	59	82.014	Haplochromis_burtoni
ENSCAPG00000009461	-	99	100.000	ENSHGLG00000002927	-	68	100.000	Heterocephalus_glaber_female
ENSCAPG00000009461	-	99	73.913	ENSHGLG00000009842	-	74	73.913	Heterocephalus_glaber_female
ENSCAPG00000009461	-	100	100.000	ENSHGLG00100006673	-	78	100.000	Heterocephalus_glaber_male
ENSCAPG00000009461	-	92	90.977	ENSHGLG00100018935	-	75	90.977	Heterocephalus_glaber_male
ENSCAPG00000009461	-	91	84.375	ENSHCOG00000004655	pabpn1	60	81.295	Hippocampus_comes
ENSCAPG00000009461	-	91	85.156	ENSIPUG00000008085	PABPN1	59	82.014	Ictalurus_punctatus
ENSCAPG00000009461	-	91	82.031	ENSIPUG00000000180	-	61	79.137	Ictalurus_punctatus
ENSCAPG00000009461	-	99	99.275	ENSSTOG00000029847	BCL2L2-PABPN1	78	99.275	Ictidomys_tridecemlineatus
ENSCAPG00000009461	-	99	99.275	ENSJJAG00000023507	Gm20521	78	99.275	Jaculus_jaculus
ENSCAPG00000009461	-	96	83.582	ENSKMAG00000018748	pabpn1	57	83.582	Kryptolebias_marmoratus
ENSCAPG00000009461	-	99	82.014	ENSLBEG00000027266	pabpn1	59	82.014	Labrus_bergylta
ENSCAPG00000009461	-	100	85.714	ENSLACG00000000646	pabpn1	61	89.286	Latimeria_chalumnae
ENSCAPG00000009461	-	93	67.176	ENSLOCG00000004694	pabpn1l	63	67.153	Lepisosteus_oculatus
ENSCAPG00000009461	-	99	83.453	ENSLOCG00000000796	pabpn1	50	83.453	Lepisosteus_oculatus
ENSCAPG00000009461	-	99	98.551	ENSLAFG00000031227	-	91	98.551	Loxodonta_africana
ENSCAPG00000009461	-	92	91.473	ENSMFAG00000031355	-	90	91.473	Macaca_fascicularis
ENSCAPG00000009461	-	99	99.275	ENSMFAG00000032183	BCL2L2-PABPN1	78	99.275	Macaca_fascicularis
ENSCAPG00000009461	-	99	99.275	ENSMMUG00000014747	BCL2L2-PABPN1	92	99.254	Macaca_mulatta
ENSCAPG00000009461	-	98	89.051	ENSMNEG00000035750	-	90	91.473	Macaca_nemestrina
ENSCAPG00000009461	-	99	99.275	ENSMNEG00000045065	BCL2L2-PABPN1	51	99.275	Macaca_nemestrina
ENSCAPG00000009461	-	99	99.275	ENSMLEG00000043862	BCL2L2-PABPN1	78	99.275	Mandrillus_leucophaeus
ENSCAPG00000009461	-	98	86.861	ENSMLEG00000034623	-	90	89.147	Mandrillus_leucophaeus
ENSCAPG00000009461	-	99	99.275	ENSMICG00000010002	BCL2L2-PABPN1	51	99.275	Microcebus_murinus
ENSCAPG00000009461	-	99	97.826	ENSMOCG00000018557	Gm20521	66	98.148	Microtus_ochrogaster
ENSCAPG00000009461	-	99	82.734	ENSMMOG00000005405	pabpn1	59	82.734	Mola_mola
ENSCAPG00000009461	-	100	96.429	MGP_CAROLIEiJ_G0019277	Pabpn1	78	96.377	Mus_caroli
ENSCAPG00000009461	-	100	97.143	ENSMUSG00000022194	Pabpn1	83	97.143	Mus_musculus
ENSCAPG00000009461	-	100	97.143	MGP_PahariEiJ_G0030295	Pabpn1	100	95.238	Mus_pahari
ENSCAPG00000009461	-	100	97.143	MGP_SPRETEiJ_G0020166	Pabpn1	78	97.101	Mus_spretus
ENSCAPG00000009461	-	100	99.286	ENSMPUG00000006775	-	83	99.286	Mustela_putorius_furo
ENSCAPG00000009461	-	99	98.551	ENSMLUG00000003800	-	73	98.551	Myotis_lucifugus
ENSCAPG00000009461	-	99	94.203	ENSMLUG00000028677	-	51	94.203	Myotis_lucifugus
ENSCAPG00000009461	-	99	82.014	ENSNBRG00000023955	pabpn1	78	82.014	Neolamprologus_brichardi
ENSCAPG00000009461	-	96	72.388	ENSNLEG00000035292	-	94	72.388	Nomascus_leucogenys
ENSCAPG00000009461	-	98	90.511	ENSODEG00000011555	-	73	90.511	Octodon_degus
ENSCAPG00000009461	-	96	95.522	ENSOANG00000009218	-	92	95.522	Ornithorhynchus_anatinus
ENSCAPG00000009461	-	99	99.275	ENSOCUG00000016174	PABPN1	51	99.275	Oryctolagus_cuniculus
ENSCAPG00000009461	-	99	82.734	ENSORLG00000027900	pabpn1	57	84.444	Oryzias_latipes
ENSCAPG00000009461	-	92	85.271	ENSORLG00015000018	pabpn1	59	82.734	Oryzias_latipes_hsok
ENSCAPG00000009461	-	99	82.014	ENSOMEG00000016618	pabpn1	50	83.704	Oryzias_melastigma
ENSCAPG00000009461	-	93	84.615	ENSPPAG00000039421	-	74	84.615	Pan_paniscus
ENSCAPG00000009461	-	100	99.286	ENSPPAG00000028984	BCL2L2-PABPN1	83	99.286	Pan_paniscus
ENSCAPG00000009461	-	99	99.275	ENSPTIG00000001063	BCL2L2-PABPN1	78	99.275	Panthera_tigris_altaica
ENSCAPG00000009461	-	99	99.275	ENSPTRG00000006167	BCL2L2	51	99.275	Pan_troglodytes
ENSCAPG00000009461	-	98	89.051	ENSPANG00000023326	-	90	91.473	Papio_anubis
ENSCAPG00000009461	-	99	99.275	ENSPANG00000021100	BCL2L2-PABPN1	51	99.275	Papio_anubis
ENSCAPG00000009461	-	78	76.364	ENSPKIG00000008340	pabpn1l	61	71.318	Paramormyrops_kingsleyae
ENSCAPG00000009461	-	99	82.857	ENSPKIG00000018052	pabpn1	60	82.857	Paramormyrops_kingsleyae
ENSCAPG00000009461	-	81	88.496	ENSPSIG00000011959	-	83	88.496	Pelodiscus_sinensis
ENSCAPG00000009461	-	99	81.295	ENSPMGG00000022027	pabpn1	51	81.295	Periophthalmus_magnuspinnatus
ENSCAPG00000009461	-	99	98.551	ENSPEMG00000008332	Gm20521	65	98.148	Peromyscus_maniculatus_bairdii
ENSCAPG00000009461	-	73	88.235	ENSPMAG00000006212	pabpn1	61	75.172	Petromyzon_marinus
ENSCAPG00000009461	-	92	79.231	ENSPFOG00000010351	pabpn1	59	80.000	Poecilia_formosa
ENSCAPG00000009461	-	91	79.845	ENSPMEG00000020856	pabpn1	60	80.000	Poecilia_mexicana
ENSCAPG00000009461	-	99	77.143	ENSPREG00000011278	pabpn1	60	80.000	Poecilia_reticulata
ENSCAPG00000009461	-	100	99.286	ENSPPYG00000005663	PABPN1	50	99.286	Pongo_abelii
ENSCAPG00000009461	-	99	99.275	ENSPCOG00000028047	BCL2L2-PABPN1	51	99.275	Propithecus_coquereli
ENSCAPG00000009461	-	91	85.156	ENSPNYG00000013182	pabpn1	59	82.014	Pundamilia_nyererei
ENSCAPG00000009461	-	70	81.633	ENSPNAG00000021666	pabpn1l	61	73.171	Pygocentrus_nattereri
ENSCAPG00000009461	-	99	83.453	ENSPNAG00000023526	pabpn1	59	83.453	Pygocentrus_nattereri
ENSCAPG00000009461	-	94	90.152	ENSRBIG00000042811	-	56	90.152	Rhinopithecus_bieti
ENSCAPG00000009461	-	100	99.286	ENSRROG00000045535	BCL2L2-PABPN1	78	99.275	Rhinopithecus_roxellana
ENSCAPG00000009461	-	100	99.286	ENSSBOG00000026930	BCL2L2-PABPN1	83	99.286	Saimiri_boliviensis_boliviensis
ENSCAPG00000009461	-	99	78.261	ENSSHAG00000007707	-	58	78.261	Sarcophilus_harrisii
ENSCAPG00000009461	-	99	95.652	ENSSHAG00000014841	-	63	95.652	Sarcophilus_harrisii
ENSCAPG00000009461	-	99	81.295	ENSSFOG00015012565	pabpn1	62	81.295	Scleropages_formosus
ENSCAPG00000009461	-	96	68.148	ENSSFOG00015015833	pabpn1l	61	70.149	Scleropages_formosus
ENSCAPG00000009461	-	91	83.594	ENSSFOG00015014718	pabpn1	59	80.576	Scleropages_formosus
ENSCAPG00000009461	-	99	82.014	ENSSMAG00000020157	pabpn1	59	82.014	Scophthalmus_maximus
ENSCAPG00000009461	-	92	84.496	ENSSLDG00000007118	pabpn1	59	82.014	Seriola_lalandi_dorsalis
ENSCAPG00000009461	-	94	90.152	ENSSPUG00000018308	-	78	89.855	Sphenodon_punctatus
ENSCAPG00000009461	-	99	82.014	ENSSPAG00000021658	pabpn1	60	82.014	Stegastes_partitus
ENSCAPG00000009461	-	94	80.916	ENSSSCG00000034805	-	53	80.153	Sus_scrofa
ENSCAPG00000009461	-	99	50.725	ENSSSCG00000038472	-	70	50.725	Sus_scrofa
ENSCAPG00000009461	-	99	82.014	ENSTRUG00000023664	pabpn1	59	82.014	Takifugu_rubripes
ENSCAPG00000009461	-	100	81.560	ENSTNIG00000005369	pabpn1	65	81.560	Tetraodon_nigroviridis
ENSCAPG00000009461	-	99	99.275	ENSVVUG00000019912	BCL2L2-PABPN1	54	99.275	Vulpes_vulpes
ENSCAPG00000009461	-	92	80.000	ENSXCOG00000005158	pabpn1	82	80.714	Xiphophorus_couchianus
ENSCAPG00000009461	-	92	80.000	ENSXMAG00000006196	pabpn1	60	80.714	Xiphophorus_maculatus