EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009566 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 7222 bases
Position: chrAVPZ01000522.1:981368-988589
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007705	RRM_1	PF00076.22	3.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011398	RBM42-201	1164	-	ENSCAPP00000007705	387 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009566	RBM42	99	98.446	ENSG00000126254	RBM42	80	98.446	Homo_sapiens
ENSCAPG00000009566	RBM42	99	97.680	ENSAMEG00000000524	RBM42	81	97.680	Ailuropoda_melanoleuca
ENSCAPG00000009566	RBM42	99	97.927	ENSANAG00000027537	RBM42	81	97.927	Aotus_nancymaae
ENSCAPG00000009566	RBM42	99	97.409	ENSBTAG00000013440	RBM42	81	97.409	Bos_taurus
ENSCAPG00000009566	RBM42	99	96.632	ENSCJAG00000010220	RBM42	81	96.632	Callithrix_jacchus
ENSCAPG00000009566	RBM42	99	90.415	ENSCAFG00020018628	RBM42	81	90.415	Canis_lupus_dingo
ENSCAPG00000009566	RBM42	99	96.891	ENSCHIG00000009518	RBM42	81	96.891	Capra_hircus
ENSCAPG00000009566	RBM42	99	97.416	ENSTSYG00000014688	RBM42	81	97.416	Carlito_syrichta
ENSCAPG00000009566	RBM42	99	100.000	ENSCPOG00000012365	RBM42	80	100.000	Cavia_porcellus
ENSCAPG00000009566	RBM42	99	98.446	ENSCCAG00000034440	RBM42	81	98.446	Cebus_capucinus
ENSCAPG00000009566	RBM42	99	98.187	ENSCATG00000041924	RBM42	81	98.187	Cercocebus_atys
ENSCAPG00000009566	RBM42	99	98.964	ENSCLAG00000012865	RBM42	80	98.964	Chinchilla_lanigera
ENSCAPG00000009566	RBM42	99	91.192	ENSCSAG00000004422	RBM42	79	91.192	Chlorocebus_sabaeus
ENSCAPG00000009566	RBM42	99	97.668	ENSCANG00000030272	RBM42	90	97.668	Colobus_angolensis_palliatus
ENSCAPG00000009566	RBM42	99	97.668	ENSCGRG00001018540	Rbm42	81	97.668	Cricetulus_griseus_chok1gshd
ENSCAPG00000009566	RBM42	99	97.172	ENSDNOG00000037397	RBM42	81	97.172	Dasypus_novemcinctus
ENSCAPG00000009566	RBM42	99	97.668	ENSDORG00000013001	Rbm42	81	97.668	Dipodomys_ordii
ENSCAPG00000009566	RBM42	70	79.259	ENSETEG00000007878	RBM42	59	76.296	Echinops_telfairi
ENSCAPG00000009566	RBM42	99	91.451	ENSEASG00005001074	RBM42	80	91.451	Equus_asinus_asinus
ENSCAPG00000009566	RBM42	99	91.451	ENSECAG00000018215	RBM42	80	91.451	Equus_caballus
ENSCAPG00000009566	RBM42	99	97.927	ENSFCAG00000006376	RBM42	81	97.927	Felis_catus
ENSCAPG00000009566	RBM42	99	98.196	ENSFDAG00000007440	RBM42	81	98.196	Fukomys_damarensis
ENSCAPG00000009566	RBM42	99	98.446	ENSGGOG00000009972	RBM42	81	98.446	Gorilla_gorilla
ENSCAPG00000009566	RBM42	99	97.927	ENSHGLG00000008418	RBM42	81	97.927	Heterocephalus_glaber_female
ENSCAPG00000009566	RBM42	99	97.927	ENSHGLG00100018667	RBM42	81	97.927	Heterocephalus_glaber_male
ENSCAPG00000009566	RBM42	99	96.632	ENSSTOG00000013050	RBM42	81	96.632	Ictidomys_tridecemlineatus
ENSCAPG00000009566	RBM42	99	97.150	ENSJJAG00000010421	Rbm42	81	97.150	Jaculus_jaculus
ENSCAPG00000009566	RBM42	99	94.819	ENSLAFG00000014993	RBM42	80	94.041	Loxodonta_africana
ENSCAPG00000009566	RBM42	99	98.187	ENSMFAG00000002758	RBM42	81	98.187	Macaca_fascicularis
ENSCAPG00000009566	RBM42	99	98.187	ENSMMUG00000018954	RBM42	80	98.187	Macaca_mulatta
ENSCAPG00000009566	RBM42	99	98.187	ENSMNEG00000030009	RBM42	81	98.187	Macaca_nemestrina
ENSCAPG00000009566	RBM42	99	98.187	ENSMLEG00000036119	RBM42	81	98.187	Mandrillus_leucophaeus
ENSCAPG00000009566	RBM42	99	98.446	ENSMICG00000009880	RBM42	81	98.446	Microcebus_murinus
ENSCAPG00000009566	RBM42	99	97.150	ENSMOCG00000000405	Rbm42	81	97.150	Microtus_ochrogaster
ENSCAPG00000009566	RBM42	99	98.446	MGP_CAROLIEiJ_G0029536	Rbm42	81	98.446	Mus_caroli
ENSCAPG00000009566	RBM42	99	98.446	ENSMUSG00000036733	Rbm42	81	98.446	Mus_musculus
ENSCAPG00000009566	RBM42	99	97.927	MGP_PahariEiJ_G0012770	Rbm42	81	97.927	Mus_pahari
ENSCAPG00000009566	RBM42	99	98.446	MGP_SPRETEiJ_G0030632	Rbm42	81	98.446	Mus_spretus
ENSCAPG00000009566	RBM42	99	91.192	ENSMPUG00000006288	RBM42	80	91.192	Mustela_putorius_furo
ENSCAPG00000009566	RBM42	99	97.150	ENSMLUG00000011334	RBM42	81	97.150	Myotis_lucifugus
ENSCAPG00000009566	RBM42	99	98.187	ENSNGAG00000019698	Rbm42	81	98.187	Nannospalax_galili
ENSCAPG00000009566	RBM42	86	97.605	ENSNLEG00000011272	-	94	90.782	Nomascus_leucogenys
ENSCAPG00000009566	RBM42	99	83.590	ENSMEUG00000016300	RBM42	83	87.179	Notamacropus_eugenii
ENSCAPG00000009566	RBM42	99	95.078	ENSOPRG00000001229	RBM42	81	93.005	Ochotona_princeps
ENSCAPG00000009566	RBM42	99	98.964	ENSODEG00000013705	RBM42	80	98.964	Octodon_degus
ENSCAPG00000009566	RBM42	99	90.674	ENSOCUG00000003337	RBM42	79	90.674	Oryctolagus_cuniculus
ENSCAPG00000009566	RBM42	99	97.150	ENSOGAG00000004144	RBM42	81	97.150	Otolemur_garnettii
ENSCAPG00000009566	RBM42	99	87.273	ENSOARG00000004926	RBM42	79	90.649	Ovis_aries
ENSCAPG00000009566	RBM42	99	98.446	ENSPPAG00000037315	RBM42	81	98.446	Pan_paniscus
ENSCAPG00000009566	RBM42	99	97.927	ENSPPRG00000016784	RBM42	81	97.927	Panthera_pardus
ENSCAPG00000009566	RBM42	99	97.409	ENSPTIG00000019270	RBM42	81	97.409	Panthera_tigris_altaica
ENSCAPG00000009566	RBM42	99	98.446	ENSPTRG00000010852	RBM42	81	98.446	Pan_troglodytes
ENSCAPG00000009566	RBM42	99	98.187	ENSPANG00000017032	RBM42	82	98.187	Papio_anubis
ENSCAPG00000009566	RBM42	99	98.446	ENSPEMG00000012065	Rbm42	81	98.446	Peromyscus_maniculatus_bairdii
ENSCAPG00000009566	RBM42	99	97.938	ENSPPYG00000009871	RBM42	80	97.938	Pongo_abelii
ENSCAPG00000009566	RBM42	86	94.578	ENSPCAG00000013053	RBM42	69	92.169	Procavia_capensis
ENSCAPG00000009566	RBM42	86	97.898	ENSPCOG00000020672	RBM42	81	97.898	Propithecus_coquereli
ENSCAPG00000009566	RBM42	99	98.446	ENSPCOG00000026433	-	81	98.446	Propithecus_coquereli
ENSCAPG00000009566	RBM42	99	97.409	ENSPVAG00000012815	RBM42	81	97.409	Pteropus_vampyrus
ENSCAPG00000009566	RBM42	99	98.187	ENSRNOG00000024278	Rbm42	81	98.187	Rattus_norvegicus
ENSCAPG00000009566	RBM42	99	98.187	ENSRBIG00000007566	RBM42	81	98.187	Rhinopithecus_bieti
ENSCAPG00000009566	RBM42	99	98.187	ENSRROG00000042313	RBM42	81	98.187	Rhinopithecus_roxellana
ENSCAPG00000009566	RBM42	99	98.187	ENSSBOG00000030666	RBM42	95	98.187	Saimiri_boliviensis_boliviensis
ENSCAPG00000009566	RBM42	99	97.668	ENSSARG00000010724	RBM42	80	97.668	Sorex_araneus
ENSCAPG00000009566	RBM42	99	97.927	ENSSSCG00000002905	RBM42	81	97.927	Sus_scrofa
ENSCAPG00000009566	RBM42	99	98.446	ENSUAMG00000020711	RBM42	81	98.446	Ursus_americanus
ENSCAPG00000009566	RBM42	99	98.446	ENSUMAG00000020223	RBM42	81	98.446	Ursus_maritimus
ENSCAPG00000009566	RBM42	99	96.891	ENSVVUG00000015117	RBM42	81	96.891	Vulpes_vulpes