EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000009569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 68301 bases
Position: chrAVPZ01000167.1:23924353-23992653
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000007712	Fip1	PF05182.13	3.6e-25	1	1
ENSCAPP00000007723	Fip1	PF05182.13	4.4e-25	1	1
ENSCAPP00000007721	Fip1	PF05182.13	4.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000011405	-	1236	-	ENSCAPP00000007712	412 (aa)	-	-
ENSCAPT00000011417	-	1425	-	ENSCAPP00000007723	474 (aa)	-	-
ENSCAPT00000011415	-	1533	-	ENSCAPP00000007721	510 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000009569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000009569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000009569	-	57	55.967	ENSACIG00000001454	fip1l1b	80	63.830	Amphilophus_citrinellus
ENSCAPG00000009569	-	76	65.138	ENSAOCG00000021043	fip1l1b	84	54.316	Amphiprion_ocellaris
ENSCAPG00000009569	-	76	69.500	ENSAPEG00000022229	fip1l1b	84	54.316	Amphiprion_percula
ENSCAPG00000009569	-	85	49.250	ENSATEG00000021757	fip1l1b	83	55.580	Anabas_testudineus
ENSCAPG00000009569	-	77	55.738	ENSAPLG00000008548	-	51	50.923	Anas_platyrhynchos
ENSCAPG00000009569	-	88	73.649	ENSAPLG00000003042	-	98	62.842	Anas_platyrhynchos
ENSCAPG00000009569	-	92	87.500	ENSACAG00000010556	-	84	83.590	Anolis_carolinensis
ENSCAPG00000009569	-	80	65.455	ENSACLG00000010418	fip1l1b	83	55.799	Astatotilapia_calliptera
ENSCAPG00000009569	-	81	51.875	ENSAMXG00000011126	fip1l1b	74	53.586	Astyanax_mexicanus
ENSCAPG00000009569	-	65	39.928	ENSAMXG00000031045	fip1l1a	54	50.000	Astyanax_mexicanus
ENSCAPG00000009569	-	93	96.154	ENSBTAG00000020653	FIP1L1	92	83.878	Bos_taurus
ENSCAPG00000009569	-	90	80.117	ENSCHIG00000025903	-	93	79.922	Capra_hircus
ENSCAPG00000009569	-	93	100.000	ENSCPOG00000010770	-	96	88.362	Cavia_porcellus
ENSCAPG00000009569	-	90	87.435	ENSCPBG00000025019	-	80	87.435	Chrysemys_picta_bellii
ENSCAPG00000009569	-	98	88.939	ENSCGRG00001018568	Fip1l1	91	83.681	Cricetulus_griseus_chok1gshd
ENSCAPG00000009569	-	98	88.939	ENSCGRG00000000208	Fip1l1	91	83.681	Cricetulus_griseus_crigri
ENSCAPG00000009569	-	77	68.000	ENSCSEG00000006583	fip1l1b	83	53.965	Cynoglossus_semilaevis
ENSCAPG00000009569	-	84	50.639	ENSCVAG00000023435	fip1l1b	83	54.585	Cyprinodon_variegatus
ENSCAPG00000009569	-	87	50.617	ENSDARG00000070431	fip1l1b	81	54.298	Danio_rerio
ENSCAPG00000009569	-	84	41.161	ENSDARG00000043328	fip1l1a	84	58.333	Danio_rerio
ENSCAPG00000009569	-	90	60.668	ENSETEG00000018271	-	100	65.306	Echinops_telfairi
ENSCAPG00000009569	-	95	83.135	ENSEASG00005019566	-	93	85.979	Equus_asinus_asinus
ENSCAPG00000009569	-	67	87.375	ENSEEUG00000004965	-	67	81.016	Erinaceus_europaeus
ENSCAPG00000009569	-	76	56.566	ENSELUG00000004607	fip1l1a	83	46.804	Esox_lucius
ENSCAPG00000009569	-	57	57.384	ENSELUG00000001280	fip1l1b	76	60.731	Esox_lucius
ENSCAPG00000009569	-	76	50.975	ENSFHEG00000003843	fip1l1b	72	67.822	Fundulus_heteroclitus
ENSCAPG00000009569	-	81	45.233	ENSGMOG00000004913	fip1l1b	88	46.708	Gadus_morhua
ENSCAPG00000009569	-	78	31.250	ENSGMOG00000012065	-	84	33.779	Gadus_morhua
ENSCAPG00000009569	-	50	51.613	ENSGALG00000007683	-	98	61.111	Gallus_gallus
ENSCAPG00000009569	-	87	86.134	ENSGALG00000013943	-	93	70.672	Gallus_gallus
ENSCAPG00000009569	-	77	52.893	ENSGAFG00000008253	fip1l1b	71	69.802	Gambusia_affinis
ENSCAPG00000009569	-	88	45.755	ENSGACG00000015946	fip1l1b	86	47.921	Gasterosteus_aculeatus
ENSCAPG00000009569	-	55	52.361	ENSGAGG00000017677	-	55	61.386	Gopherus_agassizii
ENSCAPG00000009569	-	87	87.958	ENSGAGG00000009763	-	80	87.958	Gopherus_agassizii
ENSCAPG00000009569	-	80	65.455	ENSHBUG00000013978	fip1l1b	87	54.316	Haplochromis_burtoni
ENSCAPG00000009569	-	76	71.078	ENSHCOG00000015834	fip1l1b	83	56.522	Hippocampus_comes
ENSCAPG00000009569	-	83	52.446	ENSIPUG00000022454	fip1l1b	81	59.286	Ictalurus_punctatus
ENSCAPG00000009569	-	82	59.514	ENSKMAG00000021938	fip1l1b	71	69.802	Kryptolebias_marmoratus
ENSCAPG00000009569	-	76	49.307	ENSLBEG00000028819	fip1l1b	83	52.017	Labrus_bergylta
ENSCAPG00000009569	-	55	54.202	ENSLACG00000011944	-	76	63.861	Latimeria_chalumnae
ENSCAPG00000009569	-	89	69.512	ENSLACG00000011991	fip1l1a	82	69.636	Latimeria_chalumnae
ENSCAPG00000009569	-	89	49.904	ENSLOCG00000014127	fip1l1b	92	49.522	Lepisosteus_oculatus
ENSCAPG00000009569	-	69	65.455	ENSMAMG00000004535	fip1l1b	83	54.386	Mastacembelus_armatus
ENSCAPG00000009569	-	80	65.455	ENSMZEG00005023828	fip1l1b	83	55.799	Maylandia_zebra
ENSCAPG00000009569	-	90	72.822	ENSMGAG00000011885	-	93	81.818	Meleagris_gallopavo
ENSCAPG00000009569	-	89	84.420	ENSMAUG00000010526	Fip1l1	90	77.040	Mesocricetus_auratus
ENSCAPG00000009569	-	89	96.014	ENSMOCG00000008020	Fip1l1	93	82.176	Microtus_ochrogaster
ENSCAPG00000009569	-	73	48.926	ENSMMOG00000008262	fip1l1b	86	50.966	Mola_mola
ENSCAPG00000009569	-	74	96.078	ENSMODG00000020654	-	85	80.624	Monodelphis_domestica
ENSCAPG00000009569	-	85	50.667	ENSMALG00000000838	fip1l1b	89	50.111	Monopterus_albus
ENSCAPG00000009569	-	98	88.713	MGP_CAROLIEiJ_G0027304	Fip1l1	91	85.991	Mus_caroli
ENSCAPG00000009569	-	98	88.713	ENSMUSG00000029227	Fip1l1	91	85.991	Mus_musculus
ENSCAPG00000009569	-	89	96.377	MGP_PahariEiJ_G0017085	Fip1l1	91	85.776	Mus_pahari
ENSCAPG00000009569	-	98	88.713	MGP_SPRETEiJ_G0028299	Fip1l1	91	85.991	Mus_spretus
ENSCAPG00000009569	-	93	99.038	ENSNGAG00000008849	Fip1l1	91	87.446	Nannospalax_galili
ENSCAPG00000009569	-	80	60.924	ENSNBRG00000017832	fip1l1b	84	53.895	Neolamprologus_brichardi
ENSCAPG00000009569	-	64	53.763	ENSMEUG00000012782	-	61	89.655	Notamacropus_eugenii
ENSCAPG00000009569	-	80	60.504	ENSONIG00000008785	fip1l1b	70	68.812	Oreochromis_niloticus
ENSCAPG00000009569	-	96	75.764	ENSOANG00000003384	-	98	67.325	Ornithorhynchus_anatinus
ENSCAPG00000009569	-	54	49.782	ENSOANG00000002812	-	91	57.711	Ornithorhynchus_anatinus
ENSCAPG00000009569	-	77	68.342	ENSORLG00000004397	fip1l1b	83	54.386	Oryzias_latipes
ENSCAPG00000009569	-	77	68.342	ENSORLG00020008716	fip1l1b	83	54.605	Oryzias_latipes_hni
ENSCAPG00000009569	-	77	68.342	ENSORLG00015006736	fip1l1b	83	54.605	Oryzias_latipes_hsok
ENSCAPG00000009569	-	82	40.535	ENSOMEG00000015730	fip1l1b	83	42.612	Oryzias_melastigma
ENSCAPG00000009569	-	95	77.803	ENSOARG00000018767	-	95	81.151	Ovis_aries
ENSCAPG00000009569	-	61	44.364	ENSPKIG00000014162	-	61	39.548	Paramormyrops_kingsleyae
ENSCAPG00000009569	-	83	50.437	ENSPKIG00000003396	fip1l1b	93	52.664	Paramormyrops_kingsleyae
ENSCAPG00000009569	-	58	51.807	ENSPSIG00000010462	-	95	40.211	Pelodiscus_sinensis
ENSCAPG00000009569	-	81	51.724	ENSPMGG00000017028	fip1l1b	86	53.132	Periophthalmus_magnuspinnatus
ENSCAPG00000009569	-	95	92.453	ENSPEMG00000002025	Fip1l1	91	85.345	Peromyscus_maniculatus_bairdii
ENSCAPG00000009569	-	65	82.095	ENSPCIG00000019318	-	97	81.757	Phascolarctos_cinereus
ENSCAPG00000009569	-	86	51.372	ENSPFOG00000014745	fip1l1b	83	54.292	Poecilia_formosa
ENSCAPG00000009569	-	77	52.342	ENSPLAG00000010954	fip1l1b	83	54.604	Poecilia_latipinna
ENSCAPG00000009569	-	76	52.089	ENSPMEG00000019187	fip1l1b	83	54.506	Poecilia_mexicana
ENSCAPG00000009569	-	77	45.455	ENSPREG00000012535	fip1l1b	69	47.937	Poecilia_reticulata
ENSCAPG00000009569	-	56	81.081	ENSPVAG00000000716	-	60	79.808	Pteropus_vampyrus
ENSCAPG00000009569	-	59	59.921	ENSPNYG00000015976	fip1l1b	58	65.000	Pundamilia_nyererei
ENSCAPG00000009569	-	54	45.291	ENSPNAG00000009853	fip1l1a	53	53.191	Pygocentrus_nattereri
ENSCAPG00000009569	-	98	88.713	ENSRNOG00000002275	Fip1l1	91	83.491	Rattus_norvegicus
ENSCAPG00000009569	-	90	75.514	ENSSHAG00000015789	-	94	79.252	Sarcophilus_harrisii
ENSCAPG00000009569	-	75	58.312	ENSSFOG00015017653	fip1l1b	82	59.162	Scleropages_formosus
ENSCAPG00000009569	-	55	50.000	ENSSFOG00015010948	-	55	56.796	Scleropages_formosus
ENSCAPG00000009569	-	80	63.470	ENSSMAG00000013444	fip1l1b	84	52.954	Scophthalmus_maximus
ENSCAPG00000009569	-	69	65.455	ENSSDUG00000004117	fip1l1b	83	55.142	Seriola_dumerili
ENSCAPG00000009569	-	80	65.455	ENSSLDG00000024099	fip1l1b	83	55.263	Seriola_lalandi_dorsalis
ENSCAPG00000009569	-	98	76.688	ENSSARG00000001973	-	87	79.923	Sorex_araneus
ENSCAPG00000009569	-	54	75.676	ENSSPUG00000017328	-	69	90.323	Sphenodon_punctatus
ENSCAPG00000009569	-	69	60.504	ENSSPAG00000017564	fip1l1b	84	53.263	Stegastes_partitus
ENSCAPG00000009569	-	90	68.944	ENSTGUG00000007834	-	93	79.668	Taeniopygia_guttata
ENSCAPG00000009569	-	76	66.169	ENSTRUG00000001545	fip1l1b	83	52.851	Takifugu_rubripes
ENSCAPG00000009569	-	84	49.502	ENSTNIG00000004104	fip1l1b	84	50.000	Tetraodon_nigroviridis
ENSCAPG00000009569	-	71	76.875	ENSTBEG00000007839	-	71	76.875	Tupaia_belangeri
ENSCAPG00000009569	-	96	91.489	ENSUMAG00000002758	-	99	86.770	Ursus_maritimus
ENSCAPG00000009569	-	98	81.046	ENSVPAG00000011574	-	95	80.519	Vicugna_pacos
ENSCAPG00000009569	-	90	59.144	ENSXETG00000011679	fip1l1	78	78.423	Xenopus_tropicalis
ENSCAPG00000009569	-	77	56.287	ENSXCOG00000013656	fip1l1b	85	49.292	Xiphophorus_couchianus
ENSCAPG00000009569	-	77	53.444	ENSXMAG00000017620	fip1l1b	83	55.269	Xiphophorus_maculatus